Output Summary

Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.


Multiple Sequence Summary

Only sequences containing repeats are shown!

Click on sequence description to view repeat table.


Sequence
Index Sequence
Description Number of
Repeats
2 scaffold9 2
3 scaffold10 1
4 scaffold23 3
5 scaffold13 1
6 scaffold6 28
7 scaffold22 79
9 scaffold25 2
10 scaffold28 34
13 scaffold18 22
15 scaffold17 67
16 scaffold35 42
17 scaffold20 21
18 scaffold34 38
20 scaffold37 1
21 scaffold16 72
22 scaffold43 6
23 scaffold44 2
24 scaffold5 23
25 scaffold2 19
27 scaffold48 5
28 scaffold49 1
30 scaffold47 2
31 scaffold53 3
32 scaffold41 20
33 scaffold52 1
35 scaffold55 13
36 scaffold24 184
37 scaffold57 4
39 scaffold60 3
40 scaffold58 27
41 scaffold33 161
42 scaffold14 59
43 scaffold65 3
44 scaffold66 26
45 scaffold36 11
46 scaffold64 136
47 scaffold68 6
48 scaffold42 106
49 scaffold59 31
50 scaffold70 8
51 scaffold72 7
52 scaffold73 1
54 scaffold69 222
55 scaffold63 93
56 scaffold77 91
57 scaffold38 75
58 scaffold78 50
59 scaffold40 41
60 scaffold79 100
61 scaffold75 37
62 scaffold83 37
63 scaffold84 10
64 scaffold86 48
65 scaffold15 149
66 scaffold82 141
67 scaffold61 32
68 scaffold31 152
69 scaffold88 109
70 scaffold76 122
71 scaffold89 68
72 scaffold87 99
73 scaffold85 34
74 scaffold27 173
75 scaffold91 133
76 scaffold62 112
77 scaffold81 200
78 scaffold92 9
79 scaffold12 324
80 scaffold90 4
81 scaffold93 12
82 scaffold71 258
83 scaffold94 259
84 scaffold54 205
85 scaffold80 10
86 scaffold95 61
93 C7445 2
94 C7449 3
102 C7511 2
103 C7545 2
106 C7533 4
108 C7543 1
114 C7673 3
115 C7679 8
117 C7739 2
119 C7593 1
122 C7579 2
123 C8001 41
125 C7947 1
127 C7981 42
128 C8031 42
129 scaffold67 433
130 scaffold11 282
131 scaffold19 156
132 scaffold45 315
133 scaffold8 424
134 scaffold1 358

Sequence Index	Sequence Description	Number of Repeats
2	scaffold9	2
3	scaffold10	1
4	scaffold23	3
5	scaffold13	1
6	scaffold6	28
7	scaffold22	79
9	scaffold25	2
10	scaffold28	34
13	scaffold18	22
15	scaffold17	67
16	scaffold35	42
17	scaffold20	21
18	scaffold34	38
20	scaffold37	1
21	scaffold16	72
22	scaffold43	6
23	scaffold44	2
24	scaffold5	23
25	scaffold2	19
27	scaffold48	5
28	scaffold49	1
30	scaffold47	2
31	scaffold53	3
32	scaffold41	20
33	scaffold52	1
35	scaffold55	13
36	scaffold24	184
37	scaffold57	4
39	scaffold60	3
40	scaffold58	27
41	scaffold33	161
42	scaffold14	59
43	scaffold65	3
44	scaffold66	26
45	scaffold36	11
46	scaffold64	136
47	scaffold68	6
48	scaffold42	106
49	scaffold59	31
50	scaffold70	8
51	scaffold72	7
52	scaffold73	1
54	scaffold69	222
55	scaffold63	93
56	scaffold77	91
57	scaffold38	75
58	scaffold78	50
59	scaffold40	41
60	scaffold79	100
61	scaffold75	37
62	scaffold83	37
63	scaffold84	10
64	scaffold86	48
65	scaffold15	149
66	scaffold82	141
67	scaffold61	32
68	scaffold31	152
69	scaffold88	109
70	scaffold76	122
71	scaffold89	68
72	scaffold87	99
73	scaffold85	34
74	scaffold27	173
75	scaffold91	133
76	scaffold62	112
77	scaffold81	200
78	scaffold92	9
79	scaffold12	324
80	scaffold90	4
81	scaffold93	12
82	scaffold71	258
83	scaffold94	259
84	scaffold54	205
85	scaffold80	10
86	scaffold95	61
93	C7445	2
94	C7449	3
102	C7511	2
103	C7545	2
106	C7533	4
108	C7543	1
114	C7673	3
115	C7679	8
117	C7739	2
119	C7593	1
122	C7579	2
123	C8001	41
125	C7947	1
127	C7981	42
128	C8031	42
129	scaffold67	433
130	scaffold11	282
131	scaffold19	156
132	scaffold45	315
133	scaffold8	424
134	scaffold1	358