Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold66
Parameters: 2 7 7 80 10 50 500
Length:  14457

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--51
21
2.5
21
96
3
95
17
64
11
5
1.45
494--522
12
2.4
12
100
0
58
17
6
51
24
1.69
501--540
12
3.3
12
89
0
53
12
22
45
20
1.84
578--619
21
2.0
21
95
0
75
30
9
33
26
1.88
733--818
15
5.7
15
93
5
129
31
31
16
20
1.95
732--827
45
2.1
45
83
7
124
29
33
16
20
1.95
2420--2471
18
2.9
18
91
0
86
28
0
55
15
1.40
2470--2541
11
6.5
11
88
0
90
20
1
48
29
1.58
2460--2555
22
4.4
22
82
0
102
21
1
50
27
1.56
2470--2552
33
2.5
33
80
0
94
20
1
49
28
1.57
2481--2555
33
2.3
35
79
13
95
21
1
49
28
1.58
2453--2567
44
2.6
44
83
1
133
25
0
48
25
1.57
9858--9941
3
28.7
3
75
4
82
55
42
1
0
1.07
9861--10000
14
10.1
14
86
6
171
51
46
2
0
1.13
9881--9999
40
3.0
40
96
0
220
48
48
2
0
1.14
9861--9996
6
21.0
6
79
14
110
51
46
2
0
1.13
10894--10927
11
3.1
11
95
0
59
11
0
70
17
1.16
11781--11805
12
2.1
12
100
0
50
0
28
32
40
1.57
12470--12551
18
4.7
18
67
24
68
6
34
31
28
1.82
12489--12515
12
2.2
12
100
0
54
0
33
33
33
1.58
12451--12560
51
2.2
51
91
0
184
6
35
32
25
1.81
12501--12567
21
3.3
20
76
16
68
4
38
32
23
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12552--12603
9
5.8
9
97
0
86
0
38
42
19
1.51
14193--14252
16
3.5
16
82
11
66
1
48
0
50
1.11
14193--14252
9
7.0
8
84
7
66
1
48
0
50
1.11
14266--14331
12
5.6
12
94
1
116
0
42
6
51
1.26

Tables:   1

The End!