Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold36
Parameters: 2 7 7 80 10 50 500
Length:  140008

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5329--5362
9
3.8
9
100
0
68
8
0
32
58
1.29
6122--6146
13
1.9
13
100
0
50
8
20
0
72
1.10
68508--68592
15
5.6
16
89
8
117
5
43
17
32
1.73
68508--68593
30
2.9
30
89
3
129
5
44
17
32
1.73
77553--77596
12
3.7
12
100
0
88
25
9
43
22
1.82
77556--77617
24
2.7
23
83
11
67
25
9
41
22
1.84
104393--104445
6
8.8
6
85
0
61
47
5
47
0
1.26
104432--104481
24
2.1
24
88
0
73
36
20
44
0
1.52
110581--110619
18
2.2
18
86
9
53
28
30
35
5
1.79
110758--110789
9
3.6
9
91
0
55
34
31
21
12
1.91
127668--127730
31
2.0
31
90
0
99
26
31
25
15
1.96

Tables:   1

The End!