Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold5
Parameters: 2 7 7 80 10 50 500
Length:  171943

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--98
26
3.8
26
100
0
196
42
19
20
17
1.89
3854--3961
57
1.9
57
84
3
146
35
19
32
12
1.90
18744--18788
22
2.0
22
95
0
81
11
35
13
40
1.80
20670--20740
36
2.0
36
85
0
97
15
26
29
28
1.96
20673--20740
18
3.8
18
80
0
73
16
27
27
27
1.97
25043--25095
9
5.9
9
80
8
63
18
33
13
33
1.90
25092--25172
15
5.8
15
73
16
66
8
28
24
38
1.85
25094--25203
27
4.3
27
79
13
133
8
27
24
40
1.83
25142--25199
21
2.8
21
94
0
98
6
25
25
41
1.80
25136--25178
6
6.7
6
80
15
50
2
23
30
44
1.66
25184--25208
12
2.1
12
100
0
50
8
16
24
52
1.70
65032--65087
13
4.2
13
88
4
76
19
39
17
23
1.92
66937--66977
20
2.0
20
90
0
64
14
9
31
43
1.78
81588--82280
168
4.1
168
94
1
1115
22
21
37
19
1.94
81694--82676
168
6.0
162
92
3
1066
23
20
36
19
1.95
82237--82706
156
3.0
156
96
0
850
24
20
34
21
1.96
99610--99677
24
2.8
23
78
8
64
10
22
36
30
1.87
150316--150342
9
3.0
9
100
0
54
11
22
55
11
1.66
150475--150523
15
3.3
15
76
0
53
2
22
51
24
1.59
167785--167825
2
21.5
2
80
9
50
51
2
46
0
1.14
170508--170532
13
1.9
13
100
0
50
40
8
32
20
1.81
171252--171291
13
2.9
14
85
7
64
35
7
32
25
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
171828--171861
10
3.5
10
92
4
52
29
61
0
8
1.26

Tables:   1

The End!