Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold61
Parameters: 2 7 7 80 10 50 500
Length:  252135

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--191
32
2.6
31
86
1
110
19
29
36
14
1.92
1347--1390
21
2.1
21
87
8
63
15
29
45
9
1.77
1464--1547
30
2.8
30
81
0
96
16
32
41
9
1.81
2214--2607
15
26.3
15
70
11
263
16
30
38
14
1.88
2219--2600
30
12.7
30
96
0
683
17
29
39
13
1.88
2864--2901
9
4.2
9
89
0
58
55
10
31
2
1.48
2900--2931
15
2.1
15
100
0
64
40
25
21
12
1.88
28111--28184
18
4.1
18
91
3
114
9
33
41
14
1.79
45749--45783
9
3.9
9
84
0
52
34
28
37
0
1.58
70507--70538
12
2.7
12
90
0
55
15
40
43
0
1.47
74806--74837
9
3.6
9
100
0
64
0
21
34
43
1.53
90123--90188
27
2.4
27
84
0
78
22
34
18
24
1.96
90139--90206
27
2.5
27
90
0
100
14
35
20
29
1.93
90243--90338
33
2.9
34
78
4
97
16
36
27
19
1.93
134374--134399
9
2.9
9
100
0
52
34
42
23
0
1.54
140770--140823
18
3.0
18
80
0
63
5
25
20
48
1.71
150645--150679
11
3.1
11
92
8
61
8
8
25
57
1.57
150645--150679
12
3.0
12
95
4
63
8
8
25
57
1.57
208625--208666
18
2.4
17
84
11
57
14
38
35
11
1.83
208636--208673
18
2.1
18
90
0
58
13
34
39
13
1.83
210771--210795
9
2.8
9
100
0
50
24
44
24
8
1.80
225366--225425
24
2.5
24
80
0
75
21
26
36
15
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238038--238069
15
2.1
15
94
0
55
21
46
15
15
1.83
238004--238120
51
2.3
51
95
0
216
22
40
27
10
1.86
238051--238210
36
4.6
36
75
9
170
20
40
26
11
1.87
238089--238124
15
2.4
15
100
0
72
27
44
13
13
1.82
238161--238201
21
2.0
21
85
0
55
19
41
29
9
1.83
238185--238215
15
2.1
15
93
0
53
16
45
25
12
1.83
242918--242959
9
4.7
9
90
0
57
0
19
54
26
1.44
251981--252129
58
2.6
58
92
6
257
12
40
33
14
1.82
251992--252129
31
4.8
29
74
12
117
12
38
34
15
1.84
252000--252097
31
3.3
31
77
11
132
11
38
33
16
1.84

Tables:   1

The End!