Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold2
Parameters: 2 7 7 80 10 50 500
Length:  1381

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--822
87
8.5
86
75
15
563
20
25
39
14
1.90
14--135
36
3.4
36
97
0
226
22
24
38
14
1.92
86--186
51
2.0
51
96
0
184
19
24
39
15
1.91
101--201
51
2.0
51
90
3
159
23
25
36
13
1.92
173--273
51
2.0
51
94
0
175
19
24
40
14
1.90
137--222
36
2.4
36
94
0
145
22
24
39
13
1.90
86--822
138
5.3
138
91
3
1207
20
25
39
14
1.90
188--288
51
2.0
51
88
3
150
23
25
37
12
1.91
224--309
36
2.4
36
96
0
154
22
24
38
15
1.92
296--324
15
1.9
15
100
0
58
6
24
48
20
1.74
413--633
36
6.3
36
71
17
151
20
25
39
14
1.91
260--462
51
4.0
51
94
0
343
17
25
41
15
1.88
449--600
51
3.0
51
96
0
277
19
25
39
15
1.91
635--722
30
3.2
30
64
26
86
20
26
37
15
1.93
587--738
51
3.0
51
96
0
268
19
25
40
15
1.90
689--774
36
2.4
36
92
0
136
20
24
40
13
1.89
725--822
51
1.9
51
97
0
187
18
25
41
14
1.88
761--789
15
1.9
15
100
0
58
6
24
48
20
1.74
1010--1381
39
9.5
39
96
0
663
31
20
37
11
1.88

Tables:   1

The End!