Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold20
Parameters: 2 7 7 80 10 50 500
Length:  119540

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3875--3981
9
11.9
9
91
0
151
0
35
4
59
1.18
16795--17062
24
11.3
24
77
2
218
22
29
37
10
1.88
16794--17062
72
3.8
72
77
3
251
22
29
37
10
1.88
17444--17490
24
2.0
24
91
0
76
25
31
27
14
1.95
17704--17786
24
3.5
24
86
0
121
16
31
36
15
1.91
18648--18686
21
1.9
20
84
5
51
17
38
28
15
1.91
19563--19605
12
3.6
12
100
0
86
6
27
48
16
1.71
47715--47747
9
3.7
9
91
0
57
24
42
9
24
1.83
55055--55157
39
2.6
39
89
0
161
20
41
18
19
1.90
61321--61539
54
4.1
54
91
1
341
26
21
36
15
1.93
78549--78590
21
2.0
21
95
0
75
26
33
11
28
1.92
84282--84363
14
5.9
14
75
5
76
29
1
47
21
1.59
84278--84357
41
2.0
41
85
5
108
28
1
48
21
1.58
87797--87874
32
2.4
32
86
0
111
29
32
16
21
1.96
87821--87871
16
3.2
16
94
0
93
31
31
13
23
1.93
92241--92311
16
4.4
16
91
7
108
22
5
45
26
1.75
95013--95056
16
2.7
16
96
3
79
20
11
56
11
1.64
96441--96474
9
3.8
9
96
0
59
26
11
50
11
1.73
99599--99660
24
2.6
23
84
5
79
25
27
29
17
1.98
102986--103029
21
2.1
21
86
0
61
43
9
43
4
1.56
103046--103125
27
3.0
27
86
0
97
21
26
40
12
1.89

Tables:   1

The End!