Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: C8001
Parameters: 2 7 7 80 10 50 500
Length:  56595

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--564
16
3.9
16
91
4
88
15
41
8
35
1.77
505--564
30
1.9
31
90
6
95
15
41
8
35
1.77
504--579
16
4.9
16
85
7
86
17
43
7
31
1.77
1752--1793
18
2.3
18
87
0
57
30
7
45
16
1.74
2866--3082
22
10.3
22
75
14
176
36
21
21
19
1.95
2891--3084
43
4.5
44
76
12
190
37
21
21
19
1.94
4289--4331
18
2.4
18
84
7
61
0
23
30
46
1.52
8428--8454
12
2.2
12
100
0
54
25
22
51
0
1.48
9231--9278
19
2.4
21
86
10
73
10
0
60
29
1.30
9254--9297
18
2.4
18
85
7
54
20
0
50
29
1.49
9365--9409
15
3.0
15
93
0
72
28
0
48
22
1.50
10354--10384
12
2.6
12
100
0
62
0
25
22
51
1.48
10872--10905
13
2.8
12
86
8
50
2
0
70
26
1.01
13022--13078
27
2.1
27
86
0
78
24
52
15
7
1.67
15719--15752
10
3.4
10
91
0
59
32
47
17
2
1.63
16772--16928
10
15.5
10
69
21
80
31
36
2
29
1.71
16779--16887
33
3.3
33
83
8
109
30
36
2
30
1.72
16853--16882
14
2.1
14
93
0
51
33
36
3
26
1.73
16901--16931
9
3.4
9
95
0
53
35
41
0
22
1.54
18345--18668
49
6.7
50
70
20
169
15
29
12
43
1.82
18592--18675
42
2.0
42
84
9
109
14
29
11
44
1.81
22622--22670
10
4.7
10
84
2
62
2
2
63
32
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22881--22944
18
3.6
18
86
0
83
26
7
39
26
1.83
22893--22944
18
2.9
18
91
0
86
25
5
38
30
1.79
22874--22957
36
2.3
36
83
4
107
25
5
41
27
1.78
24464--24539
24
3.2
24
78
0
80
19
31
21
27
1.97
37261--37315
15
3.7
14
90
4
74
12
52
7
27
1.65
41288--41334
12
3.8
12
97
2
85
8
38
19
34
1.82
44443--44476
8
4.2
8
85
14
52
23
8
52
14
1.69
45260--45290
9
3.6
9
91
8
55
22
16
48
12
1.80
45780--45811
10
3.2
10
95
0
55
31
53
9
6
1.58
46022--46087
3
21.3
3
73
17
55
0
62
0
37
0.96
48590--48672
20
4.2
19
78
7
78
15
7
42
34
1.75
48587--48666
40
2.0
39
88
7
117
15
7
41
36
1.75
49516--49564
10
5.0
10
92
5
64
6
32
26
34
1.81
50010--50064
25
2.1
27
83
6
69
12
34
38
14
1.84
52862--52907
21
2.2
20
88
7
74
4
34
45
15
1.66
54894--54936
8
5.4
8
80
0
50
51
9
11
27
1.69
55283--55323
17
2.4
18
80
12
50
36
21
14
26
1.93
55283--55323
9
4.8
9
79
11
50
36
21
14
26
1.93
56316--56363
11
4.3
11
81
5
60
39
35
10
14
1.80

Tables:   1

The End!