Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold55
Parameters: 2 7 7 80 10 50 500
Length:  18981

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3534--3575
10
4.4
10
82
11
52
38
57
4
0
1.20
3534--3575
20
2.1
20
90
0
66
38
57
4
0
1.20
4776--4844
11
5.9
11
81
10
68
18
63
11
5
1.47
4775--4821
14
3.4
14
94
5
87
23
63
6
6
1.41
6155--6192
18
2.1
18
95
0
67
2
23
55
18
1.55
6427--6495
15
4.6
15
90
0
93
24
27
40
7
1.81
6427--6504
30
2.6
30
83
0
93
25
28
39
6
1.80
6427--6504
15
5.2
15
90
0
75
25
28
39
6
1.80
6578--6656
6
13.7
6
75
7
56
16
34
26
22
1.95
6570--6603
12
2.8
12
86
0
50
14
38
26
20
1.91
6664--6704
21
2.0
21
95
0
73
17
41
14
26
1.88
10995--11034
20
2.0
21
95
5
73
22
32
0
45
1.53
12453--12487
9
4.0
9
92
3
54
2
5
45
45
1.41

Tables:   1

The End!