Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold75
Parameters: 2 7 7 80 10 50 500
Length:  153494

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6946--6971
9
2.9
9
100
0
52
57
30
11
0
1.34
27875--27980
42
2.5
42
87
3
151
35
16
31
16
1.91
31686--31741
27
2.1
27
96
0
103
35
28
30
5
1.80
50729--50771
16
2.7
16
85
0
59
13
39
18
27
1.89
67106--67146
21
2.0
21
90
0
64
12
21
41
24
1.87
75297--75357
17
3.6
17
90
0
95
11
36
16
36
1.85
77312--77351
21
1.9
21
85
10
55
17
25
50
7
1.72
79304--79365
27
2.3
27
82
0
79
25
48
11
14
1.77
79344--79377
12
2.8
12
100
0
68
26
44
14
14
1.84
79851--79890
12
3.3
12
85
0
53
25
50
12
12
1.75
79859--79897
12
3.2
12
85
0
51
23
51
12
12
1.74
79887--79947
27
2.3
27
91
0
95
16
50
13
19
1.77
81163--81204
21
2.0
21
90
0
66
21
16
45
16
1.86
81288--81348
18
3.4
18
86
0
77
27
22
27
21
1.99
81288--81367
36
2.3
35
87
6
110
30
21
30
18
1.97
83146--83176
13
2.4
13
100
0
62
29
22
22
25
1.99
83359--83394
15
2.3
16
90
4
56
25
63
0
11
1.27
86140--86165
12
2.2
12
100
0
52
7
26
42
23
1.81
87860--87934
12
6.2
12
74
0
78
32
34
25
8
1.85
87860--87922
24
2.6
24
89
0
90
31
34
25
7
1.85
87879--87951
36
2.0
36
89
0
110
34
35
23
6
1.81
88086--88126
21
2.0
21
85
0
55
7
51
31
9
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88482--88603
24
5.1
24
80
0
127
22
40
26
9
1.85
88691--88762
24
3.0
24
75
4
74
19
41
29
9
1.83
88688--88839
54
3.0
47
75
12
142
17
42
28
11
1.84
88703--88791
30
3.2
30
80
9
91
19
43
29
7
1.78
88703--88816
54
2.1
54
90
0
174
18
42
29
8
1.80
88703--88843
24
5.6
24
74
9
129
18
42
29
9
1.81
88701--88849
78
1.9
78
81
2
183
18
42
29
9
1.81
93072--93214
15
9.5
15
88
0
178
2
36
8
53
1.43
93072--93214
30
4.8
30
89
0
205
2
36
8
53
1.43
93065--93214
45
3.3
45
85
0
201
2
38
8
51
1.44
94431--94461
12
2.6
12
100
0
62
9
16
22
51
1.73
136131--136189
31
1.9
31
93
6
102
45
1
35
16
1.58
138630--138659
15
2.0
15
93
0
51
36
16
46
0
1.47
144487--144512
9
2.9
9
100
0
52
0
46
42
11
1.40
147352--147391
16
2.5
16
95
0
71
12
40
22
25
1.89

Tables:   1

The End!