Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold6
Parameters: 2 7 7 80 10 50 500
Length:  17077

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
304--351
17
2.8
17
93
0
87
37
10
39
12
1.77
1623--1687
17
3.8
17
87
2
94
35
20
12
32
1.89
2293--2320
13
2.2
13
100
0
56
14
7
64
14
1.48
2359--2408
13
4.0
13
75
15
52
38
0
38
24
1.56
2629--2671
14
3.1
14
96
0
77
25
23
13
37
1.92
2722--2758
10
3.7
10
92
0
65
18
43
8
29
1.79
2818--2851
12
2.9
12
86
4
52
5
32
26
35
1.81
6442--6481
18
2.2
18
90
0
62
32
12
25
30
1.92
6894--6926
15
2.2
15
94
0
57
9
30
39
21
1.84
7422--7468
21
2.2
21
96
0
85
4
31
42
21
1.72
7610--7647
18
2.1
18
90
0
58
13
42
7
36
1.73
8928--8957
13
2.3
13
94
0
51
6
3
26
63
1.35
8934--8997
32
2.0
32
90
0
101
9
6
23
60
1.50
8946--8997
16
3.2
17
81
10
72
11
7
23
57
1.59
10546--10587
14
3.0
14
96
0
75
7
45
28
19
1.76
12253--12283
15
2.1
15
93
0
53
6
51
32
9
1.60
12266--12314
21
2.3
21
82
0
62
14
48
28
8
1.72
12351--12447
18
5.6
17
72
12
81
19
52
24
3
1.60
12344--12440
51
1.9
51
89
0
149
17
53
23
5
1.64
12428--12471
12
3.7
12
81
0
52
25
50
25
0
1.50
13442--13497
10
6.1
10
85
12
68
32
30
12
25
1.92
13585--13626
11
3.8
11
93
0
66
0
26
45
28
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13774--13828
21
2.7
20
88
8
83
18
0
50
30
1.47
15661--15701
10
4.1
10
100
0
82
31
29
19
19
1.96
16039--16095
12
4.5
13
82
10
66
50
49
0
0
1.00
16047--16100
6
9.2
6
85
4
65
51
48
0
0
1.00
16039--16090
18
2.8
18
88
5
77
51
48
0
0
1.00
16048--16099
9
6.2
9
80
13
58
50
50
0
0
1.00

Tables:   1

The End!