Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold41
Parameters: 2 7 7 80 10 50 500
Length:  81668

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--79
36
2.2
36
95
0
140
15
39
24
21
1.91
117--232
15
6.9
15
68
24
72
17
44
25
12
1.84
66--331
87
3.1
87
95
1
471
14
42
25
16
1.87
117--217
36
2.8
36
87
3
141
16
44
24
13
1.85
30--181
51
3.0
51
92
1
234
15
43
25
15
1.86
127--193
21
3.5
21
69
23
74
17
41
26
13
1.87
156--268
51
2.2
51
96
0
208
15
43
25
15
1.86
1--390
138
2.8
134
88
4
550
14
42
25
18
1.88
219--304
36
2.4
36
100
0
172
12
43
24
19
1.86
291--319
15
1.9
15
100
0
58
20
48
24
6
1.74
377--447
15
4.9
15
65
16
51
14
28
28
29
1.95
255--400
51
2.9
51
92
2
240
13
42
25
18
1.87
386--440
27
2.0
27
82
0
65
16
25
29
29
1.97
410--483
36
2.1
36
84
5
96
12
29
25
32
1.92
31975--32429
228
2.0
228
97
0
856
26
23
24
24
2.00
38762--38797
18
2.0
18
100
0
72
0
44
0
55
0.99
41460--41500
21
2.0
21
90
0
64
2
46
24
26
1.65
80980--81188
36
5.8
36
99
0
409
18
33
25
22
1.97
81371--81571
27
7.6
27
93
1
318
17
54
16
11
1.71
81554--81668
33
3.5
33
89
2
178
18
53
20
7
1.68

Tables:   1

The End!