Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold80
Parameters: 2 7 7 80 10 50 500
Length:  303919

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--99
26
3.8
26
100
0
198
43
19
20
17
1.88
4099--4135
18
2.1
18
89
0
56
24
43
32
0
1.55
41699--41756
27
2.1
27
90
0
89
17
44
24
13
1.85
41710--41774
27
2.4
27
84
5
78
16
40
29
13
1.88
49683--49740
6
9.7
6
90
0
71
22
50
27
0
1.50
49683--49740
18
3.2
18
87
0
80
22
50
27
0
1.50
49683--49740
12
4.8
12
91
0
80
22
50
27
0
1.50
88766--88815
25
2.0
25
96
0
91
50
4
18
28
1.65
148065--148105
18
2.3
19
87
8
59
34
7
24
34
1.83
228920--228958
20
2.0
20
89
0
60
35
33
23
7
1.83

Tables:   1

The End!