Output Summary

Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.


Multiple Sequence Summary

Only sequences containing repeats are shown!

Click on sequence description to view repeat table.


Sequence
Index Sequence
Description Number of
Repeats
1 scaffold8 6
2 scaffold2 16
6 scaffold3 1
7 scaffold15 34
8 scaffold23 8
9 scaffold30 1
10 scaffold13 5
12 scaffold6 1
13 scaffold12 7
14 scaffold33 4
15 scaffold1 29
16 scaffold14 39
17 scaffold35 15
18 scaffold18 97
19 scaffold29 43
21 scaffold40 4
22 scaffold37 69
24 scaffold38 7
25 scaffold45 30
26 scaffold39 134
27 scaffold27 32
28 scaffold31 88
29 scaffold49 69
30 scaffold16 218
31 scaffold50 155
33 scaffold25 269
34 scaffold51 49
35 scaffold54 61
36 scaffold52 122
37 scaffold7 111
38 scaffold55 185
39 scaffold57 149
41 scaffold58 47
42 scaffold34 81
43 scaffold10 87
44 scaffold62 44
45 scaffold66 1
46 scaffold63 85
47 scaffold60 4
48 scaffold48 294
49 scaffold61 109
50 scaffold65 2
51 scaffold68 74
52 scaffold69 12
53 scaffold71 143
54 scaffold72 94
55 scaffold32 121
56 scaffold73 11
57 scaffold70 90
58 scaffold19 90
59 scaffold36 336
60 scaffold56 146
61 scaffold43 13
62 scaffold47 152
63 scaffold9 15
64 scaffold46 143
65 scaffold74 308
66 C10339 1
73 C10375 5
80 C10445 2
82 C10481 1
86 C10501 1
90 C10381 1
91 C10569 1
94 C10589 4
96 C10443 1
97 C10591 7
98 C10587 3
99 C10817 13
100 C10605 1
101 C10837 9
102 C10713 8
103 C10871 27
104 C10787 13
105 C10913 2
106 C11039 20
107 scaffold67 101
108 scaffold44 117
109 scaffold20 179
110 scaffold41 598
111 scaffold26 610
112 scaffold64 266
113 scaffold17 426

Sequence Index	Sequence Description	Number of Repeats
1	scaffold8	6
2	scaffold2	16
6	scaffold3	1
7	scaffold15	34
8	scaffold23	8
9	scaffold30	1
10	scaffold13	5
12	scaffold6	1
13	scaffold12	7
14	scaffold33	4
15	scaffold1	29
16	scaffold14	39
17	scaffold35	15
18	scaffold18	97
19	scaffold29	43
21	scaffold40	4
22	scaffold37	69
24	scaffold38	7
25	scaffold45	30
26	scaffold39	134
27	scaffold27	32
28	scaffold31	88
29	scaffold49	69
30	scaffold16	218
31	scaffold50	155
33	scaffold25	269
34	scaffold51	49
35	scaffold54	61
36	scaffold52	122
37	scaffold7	111
38	scaffold55	185
39	scaffold57	149
41	scaffold58	47
42	scaffold34	81
43	scaffold10	87
44	scaffold62	44
45	scaffold66	1
46	scaffold63	85
47	scaffold60	4
48	scaffold48	294
49	scaffold61	109
50	scaffold65	2
51	scaffold68	74
52	scaffold69	12
53	scaffold71	143
54	scaffold72	94
55	scaffold32	121
56	scaffold73	11
57	scaffold70	90
58	scaffold19	90
59	scaffold36	336
60	scaffold56	146
61	scaffold43	13
62	scaffold47	152
63	scaffold9	15
64	scaffold46	143
65	scaffold74	308
66	C10339	1
73	C10375	5
80	C10445	2
82	C10481	1
86	C10501	1
90	C10381	1
91	C10569	1
94	C10589	4
96	C10443	1
97	C10591	7
98	C10587	3
99	C10817	13
100	C10605	1
101	C10837	9
102	C10713	8
103	C10871	27
104	C10787	13
105	C10913	2
106	C11039	20
107	scaffold67	101
108	scaffold44	117
109	scaffold20	179
110	scaffold41	598
111	scaffold26	610
112	scaffold64	266
113	scaffold17	426