Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold51
Parameters: 2 7 7 80 10 50 500
Length:  82432

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
587--628
21
2.0
20
90
4
66
7
45
35
11
1.69
1450--1492
21
2.0
21
81
0
50
6
41
41
9
1.64
1941--1971
16
1.9
16
93
0
53
19
0
61
19
1.35
2979--3017
20
2.0
20
89
0
60
10
48
5
35
1.59
3024--3052
13
2.2
13
100
0
58
6
48
6
37
1.57
3504--3537
12
2.8
12
100
0
68
8
58
23
8
1.56
6688--6758
9
7.9
9
78
6
81
22
9
32
35
1.87
8250--8303
12
4.5
12
90
0
72
24
48
16
11
1.79
8362--8419
19
3.2
19
75
9
75
27
53
12
6
1.63
8362--8428
36
2.0
32
83
16
84
25
53
14
5
1.64
9094--9157
12
5.2
12
90
3
92
21
48
20
9
1.77
9434--9474
16
2.5
17
92
4
66
0
46
0
53
1.00
10164--10210
21
2.2
21
92
0
76
14
46
12
25
1.80
10721--10824
12
9.2
12
77
12
112
30
39
25
3
1.74
10721--10824
45
2.3
45
100
0
208
30
39
25
3
1.74
10731--10824
33
2.8
35
84
9
108
31
38
25
4
1.75
13650--13691
15
2.8
15
96
0
75
50
0
50
0
1.00
15244--15308
21
3.0
21
88
4
94
16
23
21
38
1.93
23218--23245
13
2.2
13
100
0
56
14
7
64
14
1.48
23212--23246
13
2.9
12
88
12
54
14
8
62
14
1.53
26585--26622
18
2.1
18
90
0
58
18
34
36
10
1.85
27928--27986
12
4.9
12
89
0
82
13
0
49
37
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27987--28040
12
4.3
12
92
4
81
16
9
48
25
1.76
27941--27995
24
2.3
23
81
9
65
12
1
49
36
1.52
27978--28040
25
2.5
24
87
5
81
15
7
47
28
1.74
30313--30364
15
3.5
15
94
0
86
25
48
9
17
1.77
32009--32052
18
2.4
18
100
0
88
13
22
15
47
1.81
32310--32355
21
2.2
21
92
0
74
2
34
32
30
1.70
32479--32521
12
3.8
12
76
17
56
0
48
32
18
1.48
32480--32524
21
2.1
21
95
0
81
0
51
28
20
1.48
33503--33535
11
3.0
11
95
0
57
21
63
15
0
1.30
33552--33605
28
1.9
28
85
7
74
7
38
27
25
1.83
33561--33609
14
3.5
14
84
15
66
6
38
30
24
1.80
36397--36440
13
3.4
13
96
0
79
6
2
52
38
1.41
36505--36547
19
2.3
19
83
0
50
23
16
44
16
1.86
39217--39269
18
2.8
19
85
8
72
15
39
0
45
1.46
39289--39335
14
3.4
14
82
11
69
27
57
0
14
1.38
40952--41006
6
9.2
6
78
21
62
16
34
32
16
1.91
40952--41006
12
4.6
12
95
4
94
16
34
32
16
1.91
53703--53756
21
2.6
21
82
8
58
3
14
46
35
1.63
53940--53983
19
2.3
20
84
7
56
20
52
18
9
1.72
55707--55749
15
2.9
15
96
0
77
20
23
41
13
1.88
55709--55757
15
3.5
14
89
8
57
20
22
42
14
1.88
67921--68014
3
32.7
3
70
8
70
56
43
0
0
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67945--68062
8
15.4
8
74
17
108
50
47
0
1
1.17
67948--68062
14
8.2
14
84
7
162
49
47
0
1
1.17
67937--68057
6
19.8
6
75
17
81
51
46
0
1
1.16
74063--74101
11
3.5
11
86
6
53
10
51
10
28
1.68
75240--75306
24
2.8
24
84
8
91
23
44
20
10
1.82

Tables:   1

The End!