Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold29
Parameters: 2 7 7 80 10 50 500
Length:  64230

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
506--607
51
2.0
50
98
1
195
17
45
32
3
1.67
761--794
15
2.3
15
100
0
68
23
41
29
5
1.78
844--874
15
2.1
15
93
0
53
6
51
32
9
1.60
942--980
18
2.2
18
95
0
69
17
48
30
2
1.61
1016--1080
12
5.7
12
78
10
73
27
47
24
0
1.52
2051--2107
10
6.1
10
89
8
77
31
31
12
24
1.92
2064--2098
8
4.1
8
86
13
52
34
34
11
20
1.88
2054--2107
26
2.0
27
89
7
83
31
33
12
22
1.92
2224--2275
20
2.6
20
93
0
86
13
7
48
30
1.71
2349--2387
15
2.6
15
91
0
60
10
0
69
20
1.17
2362--2479
22
5.5
22
84
6
118
9
1
60
28
1.38
2396--2465
22
3.2
22
95
0
122
8
2
57
31
1.44
2625--2658
17
2.0
17
94
0
59
5
20
29
44
1.75
4299--4339
10
4.1
10
100
0
82
31
29
19
19
1.96
4677--4720
6
7.5
6
87
5
54
50
50
0
0
1.00
9123--9334
36
5.9
36
85
1
221
32
15
23
29
1.95
9183--9274
12
7.7
12
66
9
53
30
13
22
33
1.92
9123--9334
72
2.9
71
80
2
244
32
15
23
29
1.95
9303--9357
24
2.3
24
87
6
76
36
12
25
25
1.91
11161--11209
14
3.5
14
94
0
80
44
34
10
10
1.72
12379--12468
28
2.8
32
74
17
98
26
44
3
25
1.70
12374--12475
34
3.2
31
71
16
84
30
42
3
23
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15147--15173
11
2.5
11
100
0
54
25
55
11
7
1.61
16573--16597
11
2.3
11
100
0
50
0
8
32
60
1.26
19392--19479
26
3.5
25
78
14
85
31
39
2
26
1.68
22231--22278
21
2.3
21
92
0
78
31
43
0
25
1.55
22297--22337
10
3.5
12
87
12
59
43
46
0
9
1.36
23159--23191
9
3.6
9
95
4
57
3
0
51
45
1.16
25295--25381
27
3.3
26
92
7
140
8
44
10
36
1.68
31909--32028
9
14.9
9
73
21
99
35
55
0
10
1.34
31922--32028
16
6.8
16
87
8
132
35
54
0
10
1.35
31938--32021
23
3.7
21
78
12
69
36
53
0
9
1.34
31947--32021
7
10.1
7
76
11
69
37
53
0
9
1.33
34534--34585
25
2.1
24
89
3
77
30
1
51
15
1.54
34604--34686
24
3.5
23
90
6
121
13
1
54
31
1.47
37152--37201
3
16.7
3
82
0
64
58
2
38
2
1.21
37152--37201
15
3.3
15
91
0
73
58
2
38
2
1.21
37669--37751
11
7.7
11
76
9
82
37
59
0
3
1.15
37667--37744
22
3.6
22
86
10
108
37
60
0
2
1.11
38927--39000
16
4.7
16
89
3
123
31
44
6
17
1.75
38927--39000
31
2.3
32
88
4
123
31
44
6
17
1.75
53244--53279
13
2.8
13
100
0
72
25
16
44
13
1.85
58988--59076
14
6.4
14
85
3
101
38
26
24
10
1.87

Tables:   1

The End!