Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold2
Parameters: 2 7 7 80 10 50 500
Length:  19480

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3490--3597
10
10.4
10
80
7
108
39
52
4
2
1.36
3550--3597
2
24.5
2
80
4
53
41
56
2
0
1.11
4793--4875
11
6.9
11
74
17
60
18
66
9
6
1.41
4792--4852
14
4.4
14
87
4
97
21
67
4
6
1.33
6186--6223
18
2.1
18
95
0
67
2
23
55
18
1.55
6455--6488
15
2.3
15
100
0
68
26
23
44
5
1.76
6491--6532
15
2.8
15
96
0
75
23
38
38
0
1.55
6455--6532
30
2.6
30
77
0
84
24
30
41
3
1.73
6695--6731
9
4.1
9
92
0
65
10
59
21
8
1.56
6693--6729
18
2.1
18
100
0
74
10
62
21
5
1.48
10981--11049
20
3.4
21
94
6
124
21
34
0
43
1.53
12473--12507
9
4.0
9
96
3
63
0
8
45
45
1.34
18889--18921
9
3.7
9
91
0
57
36
21
0
42
1.53
19161--19297
9
15.9
9
78
7
88
54
45
0
0
1.05
19168--19345
14
12.1
14
81
9
187
51
46
0
1
1.15
19168--19298
6
20.8
6
82
14
122
53
46
0
0
1.00

Tables:   1

The End!