Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold14
Parameters: 2 7 7 80 10 50 500
Length:  34100

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--288
26
11.2
26
98
0
544
43
19
19
17
1.89
2112--2450
84
4.0
84
96
0
606
20
23
29
27
1.99
2656--2784
33
3.9
33
94
0
204
31
20
24
24
1.98
6710--6744
11
3.2
11
91
0
52
31
14
28
25
1.95
7637--7759
17
7.9
15
75
18
94
34
41
13
9
1.78
7650--7760
17
6.9
17
79
11
110
35
41
13
9
1.78
7651--7788
15
9.2
15
74
13
81
33
43
13
10
1.77
9924--9971
12
4.0
12
94
0
87
6
27
33
33
1.82
12215--12337
20
6.0
20
90
3
183
17
16
23
42
1.89
12215--12337
41
3.0
41
92
2
203
17
16
23
42
1.89
12210--12335
61
2.0
63
92
3
211
19
16
23
41
1.90
13752--13817
30
2.2
30
91
0
105
22
34
34
7
1.83
13768--13831
30
2.1
30
82
0
74
26
31
34
7
1.85
13883--13911
12
2.4
12
100
0
58
17
48
13
20
1.81
13956--14018
12
5.2
12
96
0
117
9
0
52
38
1.34
14254--14353
12
8.3
12
87
0
110
37
21
41
1
1.60
14257--14351
24
4.0
24
88
0
136
36
20
42
1
1.59
14254--14351
36
2.7
36
85
0
133
36
21
40
1
1.60
15158--15188
9
3.4
9
100
0
62
0
48
9
41
1.36
15155--15197
18
2.4
18
80
0
59
4
53
6
34
1.49
16430--16471
20
2.0
21
90
4
68
16
7
64
11
1.48
16825--16863
11
3.5
11
80
13
53
38
38
12
10
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16858--16920
9
7.4
9
77
13
62
33
44
0
22
1.53
16858--16919
25
2.5
25
89
5
99
33
43
0
22
1.54
16871--16936
16
4.2
16
88
3
91
30
46
0
22
1.52
16880--16936
7
7.6
7
77
14
51
29
47
0
22
1.52
18045--18152
17
6.4
17
75
12
105
39
4
43
12
1.62
18098--18159
17
3.6
17
84
2
70
46
3
37
12
1.58
18129--18227
41
2.4
41
96
0
180
44
4
41
10
1.57
18146--18222
12
6.0
12
77
14
73
45
1
44
9
1.43
18671--18701
12
2.6
12
100
0
62
0
35
51
12
1.40
19002--19057
24
2.3
24
100
0
112
16
33
26
23
1.95
19569--19637
12
5.8
12
94
0
120
17
37
17
27
1.92
19838--19867
15
2.0
15
100
0
60
26
33
13
26
1.93
20114--20162
15
3.3
15
88
0
71
6
61
0
32
1.21
21348--21403
20
2.7
21
86
5
78
30
28
28
12
1.93
21474--21498
12
2.1
12
100
0
50
36
24
32
8
1.84
24491--24615
66
1.9
66
85
3
171
20
16
29
33
1.95
24524--24618
33
2.9
32
85
6
136
20
17
30
31
1.96

Tables:   1

The End!