Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold43
Parameters: 2 7 7 80 10 50 500
Length:  303621

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74887--74925
20
2.0
20
89
0
60
7
23
33
35
1.83
155742--155782
18
2.3
18
91
0
64
34
24
7
34
1.83
175039--175073
15
2.3
15
100
0
70
5
45
28
20
1.73
200073--200162
45
2.0
45
97
0
171
35
12
7
44
1.71
200122--200235
56
2.0
56
89
0
174
32
16
12
38
1.86
214453--214502
25
2.0
25
96
0
91
28
18
4
50
1.65
253534--253591
6
9.7
6
90
0
71
0
27
50
22
1.50
253534--253591
12
4.8
12
91
0
80
0
27
50
22
1.50
253534--253591
18
3.2
18
87
0
80
0
27
50
22
1.50
261517--261574
27
2.1
27
90
0
89
13
24
44
17
1.85
287513--287774
137
1.9
137
92
0
434
28
15
20
34
1.94
299277--299313
18
2.1
18
89
0
56
0
32
43
24
1.55
303524--303621
26
3.8
26
100
0
196
17
20
19
42
1.89

Tables:   1

The End!