C1 INDEL snpeff
CHROM POS ID REF ALT QUAL DP AD GT GeneID GeneName FeatureID Biotype HGVS_C HGVS_P EFFECT IMPACT
1 230058 . G GA 45.64 21 17,4 0/1 MGP_C57BL6NJ_G0037612-MGP_C57BL6NJ_G0016197 Gm26206-Xkr4 MGP_C57BL6NJ_G0037612-MGP_C57BL6NJ_G0016197 . n.230058_230059insA . intergenic_region MODIFIER
1 264460 . G GA 38.64 13 10,3 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-17291_998-17290insT . intron_variant MODIFIER
1 275788 . G GAGA 37.64 15 13,2 0/1 MGP_C57BL6NJ_G0010169 MGP_C57BL6NJ_G0010169 MGP_C57BL6NJ_T0012124.1 processed_pseudogene n.-2765_-2764insAGA . upstream_gene_variant MODIFIER
1 275788 . G GAGA 37.64 15 13,2 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-28619_998-28618insTCT . intron_variant MODIFIER
1 275789 . CATCT C 37.60 15 13,2 0/1 MGP_C57BL6NJ_G0010169 MGP_C57BL6NJ_G0010169 MGP_C57BL6NJ_T0012124.1 processed_pseudogene n.-2763_-2760delATCT . upstream_gene_variant MODIFIER
1 275789 . CATCT C 37.60 15 13,2 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-28623_998-28620delAGAT . intron_variant MODIFIER
1 295894 . A AT 32.64 17 12,3 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-48725_998-48724insA . intron_variant MODIFIER
1 313470 . G GA 46.64 15 10,3 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-66301_998-66300insT . intron_variant MODIFIER
1 315491 . C CTGTG 152.96 10 0,5 1/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-68322_998-68321insCACA . intron_variant MODIFIER
1 338253 . G GA 23.64 10 7,2 0/1 MGP_C57BL6NJ_G0016197 Xkr4 MGP_C57BL6NJ_T0019166.1 protein_coding c.998-91084_998-91083insT . intron_variant MODIFIER