Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: MAG.C2.12_contig_258

Parameters: 2 5 7 80 10 50 2000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 2000

Length: 4327
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.26


Found at i:1308 original size:15 final size:15

Alignment explanation


    Indices: 1288--1317  Score: 60
    Period size: 15  Copynumber: 2.0  Consensus size: 15

       1278 TCTCGTGATG

                           
       1288 GCGGCGGATAAGAGC
          1 GCGGCGGATAAGAGC

                           
       1303 GCGGCGGATAAGAGC
          1 GCGGCGGATAAGAGC

       1318 AAGGTTTATT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.27, C:0.20, G:0.47, T:0.07


Consensus pattern (15 bp):   
GCGGCGGATAAGAGC
Done.