ONTOLOGY	Term	Count
BP	'de novo' AMP biosynthetic process	2
BP	'de novo' IMP biosynthetic process	9
BP	'de novo' NAD biosynthetic process	2
BP	'de novo' NAD biosynthetic process from tryptophan	4
BP	'de novo' UMP biosynthetic process	1
BP	'de novo' posttranslational protein folding	6
BP	'de novo' protein folding	12
BP	'de novo' pyrimidine nucleobase biosynthetic process	12
BP	10-formyltetrahydrofolate biosynthetic process	2
BP	10-formyltetrahydrofolate metabolic process	1
BP	2-oxoglutarate metabolic process	15
BP	3'-phospho-5'-adenylyl sulfate transmembrane transport	1
BP	3'-phosphoadenosine 5'-phosphosulfate transport	1
BP	3-keto-sphinganine metabolic process	2
BP	5-phosphoribose 1-diphosphate biosynthetic process	2
BP	5S class rRNA transcription by RNA polymerase III	6
BP	ADP metabolic process	10
BP	ADP transport	12
BP	AMP biosynthetic process	3
BP	AMP metabolic process	3
BP	ATP biosynthetic process	84
BP	ATP export	8
BP	ATP generation from ADP	14
BP	ATP metabolic process	138
BP	ATP synthesis coupled electron transport	5
BP	ATP synthesis coupled proton transport	21
BP	ATP transport	40
BP	Arp2/3 complex-mediated actin nucleation	6
BP	CAAX-box protein processing	9
BP	CDP-choline pathway	5
BP	COPII vesicle coating	5
BP	COPII-coated vesicle budding	6
BP	CUT catabolic process	8
BP	D-amino acid catabolic process	2
BP	D-gluconate catabolic process	2
BP	D-ribose metabolic process	1
BP	D-serine catabolic process	2
BP	D-serine metabolic process	1
BP	DNA biosynthetic process	39
BP	DNA clamp unloading	2
BP	DNA conformation change	42
BP	DNA damage checkpoint signaling	105
BP	DNA damage induced protein phosphorylation	8
BP	DNA damage response, detection of DNA damage	5
BP	DNA damage response, signal transduction by p53 class mediator	14
BP	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	12
BP	DNA double-strand break processing	9
BP	DNA duplex unwinding	78
BP	DNA geometric change	28
BP	DNA integration	8
BP	DNA ligation	4
BP	DNA metabolic process	606
BP	DNA packaging	28
BP	DNA recombination	288
BP	DNA repair	680
BP	DNA replication	252
BP	DNA replication checkpoint signaling	16
BP	DNA replication initiation	60
BP	DNA replication preinitiation complex assembly	2
BP	DNA replication proofreading	1
BP	DNA replication, Okazaki fragment processing	11
BP	DNA replication, removal of RNA primer	18
BP	DNA replication, synthesis of RNA primer	12
BP	DNA replication-dependent nucleosome assembly	6
BP	DNA replication-independent nucleosome assembly	15
BP	DNA replication-independent nucleosome organization	6
BP	DNA strand elongation	17
BP	DNA strand elongation involved in DNA replication	48
BP	DNA strand elongation involved in mitotic DNA replication	4
BP	DNA strand resection involved in replication fork processing	1
BP	DNA synthesis involved in DNA repair	42
BP	DNA synthesis involved in UV-damage excision repair	2
BP	DNA topological change	4
BP	DNA unwinding involved in DNA replication	3
BP	DNA-dependent DNA replication	231
BP	DNA-templated transcription open complex formation	1
BP	DNA-templated transcription, elongation	40
BP	DNA-templated transcription, initiation	56
BP	DNA-templated transcription, termination	35
BP	ER to Golgi ceramide transport	6
BP	ER-associated misfolded protein catabolic process	25
BP	ER-dependent peroxisome organization	2
BP	ER-nucleus signaling pathway	2
BP	ERAD pathway	189
BP	FAD biosynthetic process	2
BP	FAD transmembrane transport	3
BP	G protein-coupled receptor signaling pathway	80
BP	G-quadruplex DNA formation	1
BP	G1/S transition of mitotic cell cycle	88
BP	G2/M transition of mitotic cell cycle	72
BP	GDP-mannose biosynthetic process	4
BP	GDP-mannose metabolic process	4
BP	GMP biosynthetic process	6
BP	GMP metabolic process	4
BP	GMP salvage	1
BP	GPI anchor biosynthetic process	48
BP	GPI anchor metabolic process	21
BP	GTP biosynthetic process	3
BP	GTP metabolic process	3
BP	Golgi calcium ion homeostasis	3
BP	Golgi calcium ion transport	12
BP	Golgi localization	4
BP	Golgi organization	32
BP	Golgi to endosome transport	21
BP	Golgi to plasma membrane protein transport	15
BP	Golgi to plasma membrane transport	60
BP	Golgi to vacuole transport	12
BP	Golgi vesicle budding	15
BP	Golgi vesicle docking	1
BP	Golgi vesicle prefusion complex stabilization	2
BP	Golgi vesicle transport	270
BP	IMP biosynthetic process	8
BP	IMP metabolic process	8
BP	IMP salvage	2
BP	IRES-dependent translational initiation of linear mRNA	1
BP	L-alpha-amino acid transmembrane transport	9
BP	L-amino acid transport	6
BP	L-methionine salvage	2
BP	L-methionine salvage from methylthioadenosine	10
BP	L-phenylalanine catabolic process	3
BP	L-phenylalanine metabolic process	1
BP	L-serine biosynthetic process	5
BP	L-serine catabolic process	4
BP	L-serine metabolic process	10
BP	MAPK cascade	56
BP	N-acylethanolamine metabolic process	4
BP	N-acylphosphatidylethanolamine metabolic process	3
BP	N-glycan processing	6
BP	N-terminal peptidyl-methionine acetylation	3
BP	N-terminal protein amino acid acetylation	10
BP	N-terminal protein amino acid modification	6
BP	NAD biosynthesis via nicotinamide riboside salvage pathway	2
BP	NAD biosynthetic process	30
BP	NAD metabolic process	80
BP	NADH dehydrogenase complex assembly	1
BP	NADH metabolic process	48
BP	NADH oxidation	12
BP	NADP biosynthetic process	2
BP	NADP metabolic process	40
BP	NADPH regeneration	8
BP	NLS-bearing protein import into nucleus	15
BP	Okazaki fragment processing involved in mitotic DNA replication	3
BP	P-body assembly	15
BP	RNA (guanine-N7)-methylation	1
BP	RNA 3'-end processing	72
BP	RNA 5'-end processing	15
BP	RNA biosynthetic process	75
BP	RNA catabolic process	259
BP	RNA export from nucleus	222
BP	RNA folding	1
BP	RNA localization	88
BP	RNA metabolic process	1560
BP	RNA methylation	65
BP	RNA modification	29
BP	RNA phosphodiester bond hydrolysis	176
BP	RNA phosphodiester bond hydrolysis, endonucleolytic	99
BP	RNA phosphodiester bond hydrolysis, exonucleolytic	40
BP	RNA polyadenylation	18
BP	RNA polymerase II preinitiation complex assembly	28
BP	RNA polymerase III preinitiation complex assembly	1
BP	RNA processing	846
BP	RNA secondary structure unwinding	26
BP	RNA splicing	256
BP	RNA splicing, via transesterification reactions	108
BP	RNA surveillance	7
BP	RNA transport	222
BP	RNA-dependent DNA biosynthetic process	10
BP	Ras protein signal transduction	54
BP	Rho protein signal transduction	30
BP	S-adenosyl-L-methionine transmembrane transport	1
BP	S-adenosyl-L-methionine transport	1
BP	S-adenosylhomocysteine catabolic process	1
BP	S-adenosylhomocysteine metabolic process	2
BP	S-adenosylmethionine biosynthetic process	4
BP	S-adenosylmethionine cycle	2
BP	S-adenosylmethionine metabolic process	6
BP	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	15
BP	SNARE complex assembly	12
BP	SNARE complex disassembly	4
BP	SREBP signaling pathway	8
BP	SRP-dependent cotranslational protein targeting to membrane	20
BP	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3
BP	SRP-dependent cotranslational protein targeting to membrane, translocation	16
BP	TOR signaling	48
BP	TORC1 signaling	12
BP	TORC2 signaling	10
BP	U1 snRNA 3'-end processing	2
BP	U2-type prespliceosome assembly	1
BP	U4 snRNA 3'-end processing	3
BP	U5 snRNA 3'-end processing	3
BP	UDP-N-acetylglucosamine metabolic process	3
BP	UDP-galactose transmembrane transport	3
BP	UDP-glucose metabolic process	9
BP	UDP-glucose transmembrane transport	2
BP	UDP-glucosylation	1
BP	UMP biosynthetic process	6
BP	UV-damage excision repair	18
BP	[2Fe-2S] cluster assembly	16
BP	acetaldehyde metabolic process	2
BP	acetyl-CoA biosynthetic process	30
BP	acetyl-CoA biosynthetic process from pyruvate	8
BP	acetyl-CoA catabolic process	2
BP	acetyl-CoA metabolic process	50
BP	actin cortical patch localization	5
BP	actin crosslink formation	8
BP	actin cytoskeleton organization	261
BP	actin cytoskeleton reorganization	5
BP	actin filament bundle assembly	21
BP	actin filament bundle organization	4
BP	actin filament capping	4
BP	actin filament depolymerization	5
BP	actin filament network formation	5
BP	actin filament organization	84
BP	actin filament polymerization	7
BP	actin filament reorganization	5
BP	actin filament reorganization involved in cell cycle	1
BP	actin filament severing	4
BP	actin filament-based process	29
BP	actin nucleation	18
BP	actin polymerization or depolymerization	12
BP	activation of GTPase activity	12
BP	activation of immune response	4
BP	activation of protein kinase activity	54
BP	actomyosin contractile ring assembly	15
BP	actomyosin contractile ring assembly actin filament organization	1
BP	actomyosin contractile ring contraction	1
BP	actomyosin structure organization	35
BP	acyl-CoA metabolic process	72
BP	acylglycerol catabolic process	3
BP	acylglycerol metabolic process	2
BP	adenine biosynthetic process	1
BP	adenine nucleotide transport	9
BP	adhesion of symbiont to host	22
BP	adhesion of symbiont to host cell	1
BP	aerobic electron transport chain	1
BP	aerobic respiration	120
BP	age-dependent response to oxidative stress	1
BP	aggrephagy	8
BP	aging	168
BP	alanyl-tRNA aminoacylation	3
BP	alcohol catabolic process	7
BP	alcohol metabolic process	75
BP	aldehyde catabolic process	14
BP	alpha-amino acid metabolic process	70
BP	alpha-ketoglutarate transport	4
BP	amide biosynthetic process	254
BP	amide transport	141
BP	amine biosynthetic process	3
BP	amine metabolic process	28
BP	amine transport	3
BP	amino acid homeostasis	1
BP	amino acid transmembrane transport	40
BP	amino acid transport	32
BP	amino-acid betaine metabolic process	2
BP	amino-acid betaine transport	1
BP	aminoacyl-tRNA metabolism involved in translational fidelity	2
BP	ammonia assimilation cycle	2
BP	ammonium transmembrane transport	18
BP	ammonium transport	24
BP	anaphase-promoting complex-dependent catabolic process	15
BP	anatomical structure development	100
BP	anatomical structure formation involved in morphogenesis	108
BP	anatomical structure morphogenesis	264
BP	animal organ development	2
BP	animal organ morphogenesis	8
BP	anion homeostasis	1
BP	anion transmembrane transport	185
BP	anion transport	208
BP	antibiotic metabolic process	24
BP	antimicrobial humoral response	15
BP	apoptotic mitochondrial changes	5
BP	apoptotic process	60
BP	arginine biosynthetic process	18
BP	arginine biosynthetic process via ornithine	2
BP	arginine metabolic process	18
BP	argininosuccinate metabolic process	2
BP	aromatic amino acid family metabolic process	10
BP	aromatic compound biosynthetic process	151
BP	aromatic compound catabolic process	112
BP	arsenate ion transmembrane transport	1
BP	asparagine biosynthetic process	4
BP	asparagine metabolic process	2
BP	asparaginyl-tRNA aminoacylation	6
BP	aspartate family amino acid metabolic process	19
BP	aspartate metabolic process	3
BP	aspartyl-tRNA aminoacylation	1
BP	assembly of large subunit precursor of preribosome	2
BP	attachment of GPI anchor to protein	4
BP	attachment of mitotic spindle microtubules to kinetochore	3
BP	attachment of spindle microtubules to kinetochore	10
BP	autophagic cell death	3
BP	autophagosome assembly	42
BP	autophagosome maturation	6
BP	autophagosome organization	21
BP	autophagy	378
BP	autophagy of mitochondrion	63
BP	autophagy of nucleus	10
BP	autophagy of peroxisome	18
BP	azole transmembrane transport	6
BP	barbed-end actin filament capping	6
BP	base-excision repair	36
BP	base-excision repair, AP site formation	8
BP	base-excision repair, gap-filling	4
BP	bicarbonate transport	7
BP	bilirubin transport	1
BP	biological process involved in interaction with host	20
BP	biological_process	1178
BP	biosynthetic process	416
BP	box C/D RNA 3'-end processing	4
BP	box C/D snoRNP assembly	4
BP	box H/ACA RNA 3'-end processing	2
BP	box H/ACA RNA metabolic process	1
BP	box H/ACA snoRNP assembly	6
BP	branched-chain amino acid biosynthetic process	7
BP	branched-chain amino acid catabolic process	12
BP	cadmium ion transmembrane transport	4
BP	calcium ion export	1
BP	calcium ion homeostasis	48
BP	calcium ion import	15
BP	calcium ion import across plasma membrane	15
BP	calcium ion import into cytosol	3
BP	calcium ion transmembrane import into cytosol	9
BP	calcium ion transmembrane transport	48
BP	calcium ion transport	48
BP	calcium ion transport into cytosol	12
BP	calcium-mediated signaling	8
BP	canonical glycolysis	30
BP	cap-independent translational initiation	1
BP	carbohydrate biosynthetic process	40
BP	carbohydrate catabolic process	40
BP	carbohydrate derivative catabolic process	22
BP	carbohydrate derivative metabolic process	109
BP	carbohydrate derivative transport	13
BP	carbohydrate homeostasis	2
BP	carbohydrate metabolic process	265
BP	carbohydrate phosphorylation	20
BP	carbon catabolite regulation of transcription	8
BP	carboxylic acid catabolic process	28
BP	carboxylic acid metabolic process	438
BP	carboxylic acid transmembrane transport	57
BP	carboxylic acid transport	21
BP	cardiolipin acyl-chain remodeling	4
BP	cardiolipin metabolic process	6
BP	carnitine metabolic process	4
BP	carnitine transmembrane transport	3
BP	carnitine transport	2
BP	catabolic process	470
BP	cation homeostasis	46
BP	cation transmembrane transport	255
BP	cation transport	371
BP	cell adhesion	120
BP	cell aggregation	1
BP	cell aging	120
BP	cell communication	452
BP	cell cycle	137
BP	cell cycle G1/S phase transition	22
BP	cell cycle G2/M phase transition	9
BP	cell cycle phase transition	17
BP	cell death	56
BP	cell death in response to hydrogen peroxide	1
BP	cell death in response to oxidative stress	1
BP	cell development	87
BP	cell differentiation	450
BP	cell division	204
BP	cell fate commitment	21
BP	cell junction assembly	1
BP	cell maturation	8
BP	cell migration	8
BP	cell morphogenesis	36
BP	cell motility	18
BP	cell part morphogenesis	1
BP	cell projection assembly	5
BP	cell projection organization	4
BP	cell redox homeostasis	56
BP	cell surface receptor signaling pathway	72
BP	cell volume homeostasis	8
BP	cell wall macromolecule catabolic process	2
BP	cell wall mannoprotein biosynthetic process	3
BP	cell-substrate adhesion	50
BP	cellular aldehyde metabolic process	102
BP	cellular amide catabolic process	3
BP	cellular amide metabolic process	153
BP	cellular amino acid biosynthetic process	44
BP	cellular amino acid catabolic process	51
BP	cellular amino acid metabolic process	686
BP	cellular aromatic compound metabolic process	421
BP	cellular biogenic amine metabolic process	14
BP	cellular calcium ion homeostasis	72
BP	cellular carbohydrate catabolic process	8
BP	cellular carbohydrate metabolic process	72
BP	cellular cation homeostasis	88
BP	cellular chemical homeostasis	47
BP	cellular component assembly	195
BP	cellular component maintenance	7
BP	cellular copper ion homeostasis	24
BP	cellular detoxification	34
BP	cellular detoxification of aldehyde	3
BP	cellular detoxification of methylglyoxal	1
BP	cellular detoxification of nitrogen compound	2
BP	cellular glucose homeostasis	7
BP	cellular heat acclimation	3
BP	cellular homeostasis	342
BP	cellular hyperosmotic response	16
BP	cellular hyperosmotic salinity response	6
BP	cellular hypotonic response	15
BP	cellular ion homeostasis	90
BP	cellular iron ion homeostasis	77
BP	cellular ketone metabolic process	14
BP	cellular lipid catabolic process	22
BP	cellular lipid metabolic process	308
BP	cellular localization	228
BP	cellular macromolecule biosynthetic process	492
BP	cellular macromolecule catabolic process	112
BP	cellular manganese ion homeostasis	2
BP	cellular metabolic process	825
BP	cellular metal ion homeostasis	90
BP	cellular modified amino acid catabolic process	2
BP	cellular modified amino acid metabolic process	28
BP	cellular oxidant detoxification	40
BP	cellular polysaccharide biosynthetic process	22
BP	cellular potassium ion homeostasis	18
BP	cellular process	2144
BP	cellular protein catabolic process	380
BP	cellular protein localization	1062
BP	cellular protein metabolic process	1585
BP	cellular protein modification process	1162
BP	cellular protein-containing complex assembly	896
BP	cellular protein-containing complex localization	21
BP	cellular respiration	216
BP	cellular response to DNA damage stimulus	860
BP	cellular response to UV	42
BP	cellular response to acidic pH	6
BP	cellular response to alkaline pH	4
BP	cellular response to alkaloid	3
BP	cellular response to amino acid starvation	30
BP	cellular response to antibiotic	36
BP	cellular response to arsenic-containing substance	3
BP	cellular response to benomyl	1
BP	cellular response to cadmium ion	5
BP	cellular response to caffeine	4
BP	cellular response to calcium ion	7
BP	cellular response to carbohydrate stimulus	2
BP	cellular response to cold	15
BP	cellular response to copper ion	12
BP	cellular response to cytokine stimulus	54
BP	cellular response to decreased oxygen levels	10
BP	cellular response to extracellular stimulus	196
BP	cellular response to fatty acid	4
BP	cellular response to glucose starvation	20
BP	cellular response to glucose stimulus	6
BP	cellular response to heat	147
BP	cellular response to hormone stimulus	14
BP	cellular response to hydrogen peroxide	35
BP	cellular response to hyperoxia	3
BP	cellular response to hypoxia	80
BP	cellular response to increased oxygen levels	2
BP	cellular response to inorganic substance	22
BP	cellular response to interleukin-12	9
BP	cellular response to ionizing radiation	6
BP	cellular response to iron ion	8
BP	cellular response to iron ion starvation	1
BP	cellular response to light stimulus	32
BP	cellular response to lipid	24
BP	cellular response to lithium ion	3
BP	cellular response to mechanical stimulus	6
BP	cellular response to menadione	2
BP	cellular response to metal ion	8
BP	cellular response to methylglyoxal	1
BP	cellular response to misfolded protein	44
BP	cellular response to nitric oxide	8
BP	cellular response to nitrogen starvation	5
BP	cellular response to nitrosative stress	3
BP	cellular response to nutrient	30
BP	cellular response to nutrient levels	188
BP	cellular response to oleic acid	2
BP	cellular response to organic cyclic compound	12
BP	cellular response to organic substance	204
BP	cellular response to organonitrogen compound	4
BP	cellular response to osmotic stress	100
BP	cellular response to oxidative stress	520
BP	cellular response to oxygen levels	22
BP	cellular response to pH	56
BP	cellular response to pheromone	16
BP	cellular response to phosphate starvation	4
BP	cellular response to purine-containing compound	3
BP	cellular response to radiation	18
BP	cellular response to reactive nitrogen species	3
BP	cellular response to reactive oxygen species	96
BP	cellular response to salt stress	8
BP	cellular response to starvation	273
BP	cellular response to steroid hormone stimulus	12
BP	cellular response to sterol depletion	2
BP	cellular response to stress	228
BP	cellular response to superoxide	6
BP	cellular response to topologically incorrect protein	21
BP	cellular response to toxic substance	92
BP	cellular response to unfolded protein	66
BP	cellular response to water deprivation	3
BP	cellular response to xenobiotic stimulus	8
BP	cellular sphingolipid homeostasis	3
BP	cellular stress response to acidic pH	1
BP	cellular water homeostasis	2
BP	cellular zinc ion homeostasis	12
BP	centriole assembly	6
BP	centriole replication	10
BP	centromere complex assembly	4
BP	centrosome cycle	18
BP	centrosome duplication	12
BP	ceramide biosynthetic process	18
BP	ceramide metabolic process	21
BP	ceramide transport	8
BP	chaperone cofactor-dependent protein refolding	5
BP	chaperone-mediated protein complex assembly	12
BP	chaperone-mediated protein folding	66
BP	chemical homeostasis	52
BP	chitin catabolic process	9
BP	chitin metabolic process	6
BP	chloride transmembrane transport	21
BP	chloride transport	21
BP	cholesterol biosynthetic process	7
BP	cholesterol metabolic process	7
BP	chromatin assembly	84
BP	chromatin assembly or disassembly	84
BP	chromatin organization	686
BP	chromatin remodeling	306
BP	chromatin-mediated maintenance of transcription	5
BP	chromosome condensation	28
BP	chromosome localization to nuclear envelope involved in homologous chromosome segregation	1
BP	chromosome organization	548
BP	chromosome organization involved in meiotic cell cycle	24
BP	chromosome segregation	245
BP	chromosome separation	8
BP	chylomicron assembly	27
BP	circadian regulation of gene expression	5
BP	circadian rhythm	7
BP	cis assembly of pre-catalytic spliceosome	1
BP	citrate metabolic process	52
BP	citrate transport	8
BP	clathrin-dependent endocytosis	24
BP	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2
BP	cleavage involved in rRNA processing	56
BP	cobalt ion transport	3
BP	coenzyme A biosynthetic process	12
BP	coenzyme A metabolic process	8
BP	cohesin loading	2
BP	copper ion export	8
BP	copper ion homeostasis	16
BP	copper ion import	3
BP	copper ion transmembrane transport	3
BP	copper ion transport	28
BP	cortical actin cytoskeleton organization	84
BP	cortical cytoskeleton organization	42
BP	cotranslational protein targeting to membrane	20
BP	cristae formation	9
BP	cysteine biosynthetic process	6
BP	cysteine biosynthetic process from serine	2
BP	cysteine biosynthetic process via cystathionine	3
BP	cysteine metabolic process	12
BP	cysteine transport	1
BP	cysteinyl-tRNA aminoacylation	2
BP	cytidine deamination	3
BP	cytidine transport	3
BP	cytochrome complex assembly	8
BP	cytokine-mediated signaling pathway	63
BP	cytokinetic process	26
BP	cytoplasm protein quality control by the ubiquitin-proteasome system	4
BP	cytoplasmic microtubule organization	15
BP	cytoplasmic translation	213
BP	cytoplasmic translational elongation	4
BP	cytoplasmic translational initiation	10
BP	cytoplasmic translational termination	4
BP	cytoskeleton organization	336
BP	cytoskeleton-dependent cytokinesis	105
BP	cytoskeleton-dependent intracellular transport	12
BP	cytosolic calcium ion transport	8
BP	cytosolic transport	12
BP	dITP catabolic process	1
BP	dTDP biosynthetic process	1
BP	dTMP biosynthetic process	2
BP	dTTP biosynthetic process	2
BP	dUDP biosynthetic process	1
BP	dUMP biosynthetic process	2
BP	dUTP catabolic process	1
BP	deadenylation-dependent decapping of nuclear-transcribed mRNA	9
BP	deadenylation-independent decapping of nuclear-transcribed mRNA	4
BP	demethylation	4
BP	deoxycytidine metabolic process	1
BP	deoxyribonucleoside catabolic process	1
BP	deoxyribonucleoside monophosphate biosynthetic process	2
BP	deoxyribonucleoside triphosphate catabolic process	1
BP	deoxyribonucleoside triphosphate metabolic process	2
BP	deoxyribonucleotide biosynthetic process	6
BP	deoxyribonucleotide catabolic process	2
BP	deoxyribose phosphate catabolic process	1
BP	dephosphorylation	120
BP	dephosphorylation of RNA polymerase II C-terminal domain	6
BP	detection of oxidative stress	4
BP	detection of stimulus	2
BP	detoxification of nitrogen compound	1
BP	developmental maturation	2
BP	developmental process	400
BP	developmental process involved in reproduction	74
BP	dicarboxylic acid catabolic process	2
BP	dicarboxylic acid metabolic process	52
BP	dicarboxylic acid transport	12
BP	dipeptide import across plasma membrane	6
BP	dipeptide transport	2
BP	disaccharide metabolic process	8
BP	divalent inorganic cation homeostasis	10
BP	division septum assembly	3
BP	dolichol biosynthetic process	2
BP	dolichol metabolic process	3
BP	dolichol-linked oligosaccharide biosynthetic process	6
BP	dolichyl monophosphate biosynthetic process	2
BP	double-strand break repair	248
BP	double-strand break repair involved in meiotic recombination	3
BP	double-strand break repair via break-induced replication	5
BP	double-strand break repair via classical nonhomologous end joining	3
BP	double-strand break repair via homologous recombination	119
BP	double-strand break repair via nonhomologous end joining	56
BP	double-strand break repair via single-strand annealing	2
BP	dynamin family protein polymerization involved in mitochondrial fission	1
BP	early endosome to Golgi transport	8
BP	electron transport chain	45
BP	endocytic recycling	7
BP	endocytosis	224
BP	endomembrane system organization	23
BP	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	39
BP	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	51
BP	endonucleolytic cleavage involved in tRNA processing	1
BP	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	20
BP	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2
BP	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	28
BP	endoplasmic reticulum localization	5
BP	endoplasmic reticulum membrane fusion	2
BP	endoplasmic reticulum membrane organization	25
BP	endoplasmic reticulum organization	55
BP	endoplasmic reticulum polarization	2
BP	endoplasmic reticulum to Golgi vesicle-mediated transport	184
BP	endoplasmic reticulum tubular network maintenance	1
BP	endoplasmic reticulum tubular network membrane organization	4
BP	endoplasmic reticulum tubular network organization	6
BP	endoplasmic reticulum unfolded protein response	66
BP	endoplasmic reticulum-plasma membrane tethering	9
BP	endosomal transport	126
BP	endosome organization	8
BP	endosome transport via multivesicular body sorting pathway	15
BP	energy derivation by oxidation of organic compounds	74
BP	energy reserve metabolic process	30
BP	entrainment of circadian clock	4
BP	entrainment of circadian clock by photoperiod	3
BP	enzyme-directed rRNA 2'-O-methylation	1
BP	enzyme-directed rRNA pseudouridine synthesis	6
BP	epithelial tube morphogenesis	1
BP	epithelium development	2
BP	error-free postreplication DNA repair	2
BP	error-free translesion synthesis	9
BP	error-prone translesion synthesis	12
BP	erythrocyte development	5
BP	erythrocyte differentiation	8
BP	erythrocyte homeostasis	3
BP	erythrocyte maturation	3
BP	establishment of cell polarity	126
BP	establishment of chromosome localization	4
BP	establishment of localization in cell	688
BP	establishment of mitochondrion localization	3
BP	establishment of mitotic sister chromatid cohesion	6
BP	establishment of mitotic spindle localization	4
BP	establishment of organelle localization	58
BP	establishment of protein localization	828
BP	establishment of protein localization to endoplasmic reticulum	8
BP	establishment of protein localization to membrane	60
BP	establishment of protein localization to mitochondrial membrane	6
BP	establishment of protein localization to mitochondrion	38
BP	establishment of protein localization to organelle	174
BP	establishment of protein localization to peroxisome	7
BP	establishment of protein localization to plasma membrane	9
BP	establishment of protein localization to vacuole	11
BP	establishment of protein-containing complex localization to telomere	1
BP	establishment of sister chromatid cohesion	5
BP	establishment of spindle localization	6
BP	establishment of vesicle localization	24
BP	establishment or maintenance of actin cytoskeleton polarity	10
BP	establishment or maintenance of cell polarity	259
BP	establishment or maintenance of cell polarity regulating cell shape	16
BP	ethanol catabolic process	6
BP	exit from mitosis	8
BP	exocyst localization	1
BP	exocytosis	63
BP	exonucleolytic catabolism of deadenylated mRNA	36
BP	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	7
BP	export across plasma membrane	12
BP	extracellular structure organization	9
BP	farnesyl diphosphate biosynthetic process	12
BP	farnesyl diphosphate biosynthetic process, mevalonate pathway	4
BP	farnesyl diphosphate metabolic process	6
BP	fatty acid beta-oxidation	72
BP	fatty acid beta-oxidation using acyl-CoA dehydrogenase	4
BP	fatty acid beta-oxidation using acyl-CoA oxidase	5
BP	fatty acid biosynthetic process	40
BP	fatty acid catabolic process	48
BP	fatty acid metabolic process	128
BP	fatty acid oxidation	40
BP	fatty acid transport	15
BP	fluid transport	2
BP	folic acid metabolic process	10
BP	folic acid-containing compound biosynthetic process	3
BP	folic acid-containing compound metabolic process	6
BP	formation of cytoplasmic translation initiation complex	12
BP	formation of structure involved in a symbiotic process	2
BP	formation of translation preinitiation complex	9
BP	formin-nucleated actin cable assembly	3
BP	free ubiquitin chain polymerization	6
BP	fructose 1,6-bisphosphate metabolic process	4
BP	fructose 6-phosphate metabolic process	15
BP	fumarate metabolic process	4
BP	galactose catabolic process	9
BP	galactose catabolic process via UDP-galactose	2
BP	galactose metabolic process	15
BP	gamma-aminobutyric acid catabolic process	8
BP	gamma-aminobutyric acid metabolic process	4
BP	gene conversion	6
BP	gene expression	1014
BP	gene silencing	188
BP	gene silencing by RNA	8
BP	generation of catalytic spliceosome for first transesterification step	8
BP	generation of catalytic spliceosome for second transesterification step	2
BP	generation of neurons	5
BP	generation of precursor metabolites and energy	364
BP	genitalia development	3
BP	genitalia morphogenesis	2
BP	geranyl diphosphate biosynthetic process	1
BP	geranylgeranyl diphosphate biosynthetic process	1
BP	global genome nucleotide-excision repair	4
BP	gluconeogenesis	24
BP	glucosamine metabolic process	2
BP	glucose 1-phosphate metabolic process	1
BP	glucose 6-phosphate metabolic process	28
BP	glucose catabolic process	18
BP	glucose homeostasis	7
BP	glucose metabolic process	96
BP	glucosylceramide biosynthetic process	6
BP	glutamate biosynthetic process	28
BP	glutamate catabolic process	6
BP	glutamate decarboxylation to succinate	2
BP	glutamate metabolic process	70
BP	glutamine catabolic process	4
BP	glutamine family amino acid metabolic process	21
BP	glutamine metabolic process	16
BP	glutaminyl-tRNA aminoacylation	2
BP	glutaminyl-tRNAGln biosynthesis via transamidation	4
BP	glutamyl-tRNA aminoacylation	3
BP	glutathione catabolic process	4
BP	glutathione metabolic process	48
BP	glyceraldehyde-3-phosphate biosynthetic process	2
BP	glyceraldehyde-3-phosphate metabolic process	7
BP	glycerol biosynthetic process	3
BP	glycerol catabolic process	4
BP	glycerol metabolic process	20
BP	glycerol-3-phosphate catabolic process	1
BP	glycerol-3-phosphate metabolic process	3
BP	glycerolipid metabolic process	52
BP	glycerophospholipid biosynthetic process	68
BP	glycerophospholipid catabolic process	8
BP	glycerophospholipid metabolic process	50
BP	glycine biosynthetic process	1
BP	glycine biosynthetic process, by transamination of glyoxylate	2
BP	glycine catabolic process	2
BP	glycine decarboxylation via glycine cleavage system	2
BP	glycine import into mitochondrion	1
BP	glycine metabolic process	10
BP	glycine transport	4
BP	glycogen biosynthetic process	18
BP	glycogen metabolic process	30
BP	glycolipid biosynthetic process	45
BP	glycolipid metabolic process	30
BP	glycolytic process	49
BP	glycolytic process through fructose-6-phosphate	6
BP	glycolytic process through glucose-6-phosphate	6
BP	glycoprotein biosynthetic process	85
BP	glycoprotein catabolic process	50
BP	glycoprotein metabolic process	140
BP	glycosphingolipid biosynthetic process	10
BP	glycosphingolipid metabolic process	8
BP	glycosylation	51
BP	glycosylceramide metabolic process	2
BP	glyoxylate cycle	1
BP	glyoxylate metabolic process	3
BP	guanosine metabolic process	2
BP	heme A biosynthetic process	4
BP	heme biosynthetic process	64
BP	heme metabolic process	32
BP	heme transport	12
BP	hemopoiesis	8
BP	heterochromatin assembly	24
BP	heterochromatin assembly by small RNA	1
BP	heterochromatin organization	40
BP	heterocycle metabolic process	842
BP	hexose biosynthetic process	8
BP	hexose metabolic process	17
BP	histidine biosynthetic process	4
BP	histidine metabolic process	4
BP	histidyl-tRNA aminoacylation	2
BP	histone H2A acetylation	4
BP	histone H2A phosphorylation	2
BP	histone H2B conserved C-terminal lysine ubiquitination	2
BP	histone H2B ubiquitination	12
BP	histone H3 acetylation	10
BP	histone H3 deacetylation	5
BP	histone H3-K14 acetylation	4
BP	histone H3-K36 demethylation	4
BP	histone H3-K4 methylation	20
BP	histone H3-K4 trimethylation	5
BP	histone H3-K79 methylation	3
BP	histone H3-K9 demethylation	4
BP	histone H4 acetylation	25
BP	histone H4 deacetylation	5
BP	histone H4-K12 acetylation	3
BP	histone H4-K5 acetylation	2
BP	histone H4-K8 acetylation	2
BP	histone acetylation	64
BP	histone arginine methylation	3
BP	histone deacetylation	35
BP	histone demethylation	2
BP	histone displacement	1
BP	histone exchange	28
BP	histone glutamine methylation	2
BP	histone lysine demethylation	1
BP	histone lysine methylation	24
BP	histone methylation	40
BP	histone modification	126
BP	histone monoubiquitination	8
BP	histone phosphorylation	30
BP	histone ubiquitination	20
BP	histone-serine phosphorylation	1
BP	homeostasis of number of cells	1
BP	homeostatic process	316
BP	homocysteine metabolic process	6
BP	homologous chromosome pairing at meiosis	9
BP	homologous chromosome segregation	21
BP	homologous recombination	7
BP	humoral immune response	21
BP	hydrogen peroxide catabolic process	12
BP	hydrogen peroxide metabolic process	6
BP	hydrogen sulfide biosynthetic process	3
BP	hydrogen sulfide metabolic process	2
BP	hyperosmotic response	18
BP	hyperosmotic salinity response	3
BP	hypotonic response	6
BP	immune response	27
BP	immune system development	3
BP	immune system process	18
BP	import across plasma membrane	24
BP	import into cell	72
BP	import into nucleus	44
BP	indolalkylamine biosynthetic process	1
BP	inner mitochondrial membrane organization	40
BP	inorganic anion transport	20
BP	inorganic cation import across plasma membrane	12
BP	inorganic cation transmembrane transport	164
BP	inosine biosynthetic process	3
BP	inosine catabolic process	2
BP	inositol lipid-mediated signaling	9
BP	inositol phosphate biosynthetic process	2
BP	inositol phosphate metabolic process	3
BP	interleukin-12-mediated signaling pathway	27
BP	interleukin-23-mediated signaling pathway	18
BP	intermembrane lipid transfer	12
BP	internal peptidyl-lysine acetylation	32
BP	internal protein amino acid acetylation	32
BP	interstrand cross-link repair	18
BP	intra-Golgi vesicle-mediated transport	54
BP	intracellular distribution of mitochondria	3
BP	intracellular lipid transport	4
BP	intracellular mRNA localization	12
BP	intracellular pH reduction	36
BP	intracellular protein transmembrane transport	72
BP	intracellular protein transport	903
BP	intracellular signal transduction	312
BP	intracellular sterol transport	4
BP	intracellular transport	1127
BP	ion homeostasis	141
BP	ion transmembrane transport	456
BP	ion transport	552
BP	iron import into cell	16
BP	iron import into the mitochondrion	1
BP	iron incorporation into metallo-sulfur cluster	2
BP	iron ion homeostasis	117
BP	iron ion import across plasma membrane	6
BP	iron ion transmembrane transport	25
BP	iron ion transport	36
BP	iron-sulfur cluster assembly	63
BP	isocitrate metabolic process	12
BP	isoleucine biosynthetic process	5
BP	isoleucine catabolic process	4
BP	isoleucyl-tRNA aminoacylation	2
BP	isopentenyl diphosphate biosynthetic process	3
BP	isopentenyl diphosphate biosynthetic process, mevalonate pathway	4
BP	isopentenyl diphosphate metabolic process	3
BP	isoprenoid biosynthetic process	24
BP	isoprenoid metabolic process	8
BP	ketone catabolic process	3
BP	kinetochore assembly	10
BP	kinetochore organization	8
BP	kynurenine metabolic process	6
BP	lactate biosynthetic process	2
BP	lactate metabolic process	3
BP	lagging strand elongation	26
BP	late endosome to vacuole transport	26
BP	late endosome to vacuole transport via multivesicular body sorting pathway	5
BP	late nucleophagy	3
BP	leading strand elongation	8
BP	leucine biosynthetic process	4
BP	leucine catabolic process	6
BP	leucyl-tRNA aminoacylation	2
BP	lipid biosynthetic process	294
BP	lipid catabolic process	64
BP	lipid homeostasis	28
BP	lipid localization	42
BP	lipid metabolic process	680
BP	lipid modification	26
BP	lipid oxidation	16
BP	lipid phosphorylation	20
BP	lipid storage	5
BP	lipid translocation	4
BP	lipid transport	100
BP	lipid tube assembly	3
BP	lipoate biosynthetic process	4
BP	lipoate metabolic process	2
BP	lipoprotein biosynthetic process	14
BP	lipoprotein metabolic process	21
BP	localization within membrane	10
BP	locomotion	6
BP	long-chain fatty acid biosynthetic process	8
BP	long-chain fatty acid import into cell	4
BP	long-chain fatty acid metabolic process	10
BP	long-chain fatty acid transport	12
BP	lysine biosynthetic process via aminoadipic acid	4
BP	mRNA 3'-end processing	33
BP	mRNA 5'-splice site recognition	18
BP	mRNA branch site recognition	1
BP	mRNA catabolic process	120
BP	mRNA cis splicing, via spliceosome	51
BP	mRNA cleavage	16
BP	mRNA cleavage involved in mRNA processing	3
BP	mRNA export from nucleus	200
BP	mRNA export from nucleus in response to heat stress	4
BP	mRNA metabolic process	165
BP	mRNA modification	1
BP	mRNA polyadenylation	30
BP	mRNA processing	245
BP	mRNA pseudouridine synthesis	3
BP	mRNA splice site selection	36
BP	mRNA splicing, via spliceosome	225
BP	mRNA transcription	2
BP	mRNA transcription by RNA polymerase II	4
BP	mRNA transport	125
BP	macroautophagy	174
BP	macromolecule glycosylation	17
BP	macromolecule localization	209
BP	macromolecule metabolic process	599
BP	maintenance of DNA repeat elements	12
BP	maintenance of ER location	2
BP	maintenance of Golgi location	2
BP	maintenance of cell polarity	16
BP	maintenance of location in cell	11
BP	maintenance of mitotic sister chromatid cohesion	2
BP	maintenance of protein localization in endoplasmic reticulum	3
BP	maintenance of protein location	18
BP	maintenance of protein location in cell	32
BP	maintenance of protein location in nucleus	7
BP	maintenance of rDNA	2
BP	maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter	1
BP	maintenance of translational fidelity	2
BP	malate metabolic process	4
BP	malate transmembrane transport	1
BP	male genitalia development	4
BP	male genitalia morphogenesis	1
BP	male sex differentiation	3
BP	manganese ion homeostasis	2
BP	manganese ion transmembrane transport	20
BP	manganese ion transport	20
BP	mannose metabolic process	8
BP	mannose trimming involved in glycoprotein ERAD pathway	27
BP	mannosylation	12
BP	maturation of 5.8S rRNA	90
BP	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	58
BP	maturation of 5S rRNA	1
BP	maturation of LSU-rRNA	13
BP	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	30
BP	maturation of SSU-rRNA	114
BP	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	148
BP	mature ribosome assembly	3
BP	meiosis I	39
BP	meiotic DNA double-strand break formation	6
BP	meiotic DNA double-strand break processing	3
BP	meiotic DNA double-strand break processing involved in reciprocal meiotic recombination	3
BP	meiotic cell cycle	420
BP	meiotic cell cycle checkpoint signaling	3
BP	meiotic chromosome condensation	4
BP	meiotic chromosome segregation	39
BP	meiotic chromosome separation	4
BP	meiotic gene conversion	2
BP	meiotic mismatch repair	8
BP	meiotic nuclear division	16
BP	meiotic recombination checkpoint signaling	9
BP	meiotic sister chromatid cohesion	4
BP	meiotic spindle organization	3
BP	meiotic telomere clustering	2
BP	membrane assembly	12
BP	membrane biogenesis	8
BP	membrane docking	14
BP	membrane fission	3
BP	membrane fusion	133
BP	membrane lipid metabolic process	60
BP	membrane organization	384
BP	membrane raft assembly	6
BP	membrane raft distribution	2
BP	membrane raft localization	1
BP	membrane raft organization	12
BP	membrane raft polarization	2
BP	metabolic process	871
BP	metal ion homeostasis	64
BP	metal ion transport	108
BP	metaphase plate congression	4
BP	metaphase/anaphase transition of mitotic cell cycle	3
BP	methionine biosynthetic process	32
BP	methionine metabolic process	50
BP	methionine transport	1
BP	methionyl-tRNA aminoacylation	2
BP	methylation	150
BP	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2
BP	methylglyoxal catabolic process to lactate	3
BP	methylglyoxal metabolic process	6
BP	microtubule anchoring	5
BP	microtubule anchoring at microtubule organizing center	2
BP	microtubule bundle formation	6
BP	microtubule cytoskeleton organization	128
BP	microtubule cytoskeleton organization involved in mitosis	12
BP	microtubule depolymerization	8
BP	microtubule organizing center localization	3
BP	microtubule organizing center organization	24
BP	microtubule polymerization	6
BP	microtubule polymerization or depolymerization	3
BP	microtubule-based movement	35
BP	microtubule-based process	126
BP	microtubule-based transport	4
BP	mismatch repair	56
BP	mitochondria-nucleus signaling pathway	4
BP	mitochondrial ADP transmembrane transport	6
BP	mitochondrial ATP synthesis coupled electron transport	20
BP	mitochondrial ATP synthesis coupled proton transport	12
BP	mitochondrial ATP transmembrane transport	6
BP	mitochondrial DNA metabolic process	9
BP	mitochondrial DNA repair	6
BP	mitochondrial DNA replication	12
BP	mitochondrial RNA 3'-end processing	2
BP	mitochondrial RNA catabolic process	1
BP	mitochondrial RNA metabolic process	10
BP	mitochondrial RNA processing	4
BP	mitochondrial alanyl-tRNA aminoacylation	1
BP	mitochondrial alpha-ketoglutarate transmembrane transport	2
BP	mitochondrial asparaginyl-tRNA aminoacylation	2
BP	mitochondrial citrate transmembrane transport	2
BP	mitochondrial cytochrome c oxidase assembly	30
BP	mitochondrial double-strand break repair via homologous recombination	2
BP	mitochondrial electron transport, cytochrome c to oxygen	7
BP	mitochondrial electron transport, succinate to ubiquinone	2
BP	mitochondrial electron transport, ubiquinol to cytochrome c	8
BP	mitochondrial fission	12
BP	mitochondrial genome maintenance	72
BP	mitochondrial membrane fission	2
BP	mitochondrial membrane organization	48
BP	mitochondrial phosphate ion transmembrane transport	1
BP	mitochondrial protein catabolic process	6
BP	mitochondrial proton-transporting ATP synthase complex assembly	2
BP	mitochondrial pyruvate transmembrane transport	1
BP	mitochondrial respirasome assembly	2
BP	mitochondrial respiratory chain complex I assembly	4
BP	mitochondrial respiratory chain complex III assembly	6
BP	mitochondrial respiratory chain complex assembly	36
BP	mitochondrial tRNA methylation	3
BP	mitochondrial tRNA modification	2
BP	mitochondrial tRNA processing	2
BP	mitochondrial threonyl-tRNA aminoacylation	1
BP	mitochondrial transcription	5
BP	mitochondrial translation	162
BP	mitochondrial translational elongation	6
BP	mitochondrial translational termination	3
BP	mitochondrial transmembrane transport	93
BP	mitochondrial transport	222
BP	mitochondrial tyrosyl-tRNA aminoacylation	2
BP	mitochondrion distribution	28
BP	mitochondrion localization	48
BP	mitochondrion morphogenesis	5
BP	mitochondrion organization	448
BP	mitotic DNA damage checkpoint signaling	12
BP	mitotic DNA integrity checkpoint signaling	13
BP	mitotic DNA replication	20
BP	mitotic DNA replication checkpoint signaling	12
BP	mitotic DNA replication initiation	3
BP	mitotic DNA replication preinitiation complex assembly	1
BP	mitotic G1 DNA damage checkpoint signaling	20
BP	mitotic G1/S transition checkpoint signaling	10
BP	mitotic G2 DNA damage checkpoint signaling	6
BP	mitotic G2/M transition checkpoint	6
BP	mitotic cell cycle	616
BP	mitotic cell cycle checkpoint signaling	57
BP	mitotic cell cycle phase transition	34
BP	mitotic chromosome condensation	40
BP	mitotic cohesin loading	2
BP	mitotic cytokinesis	160
BP	mitotic cytokinetic process	18
BP	mitotic intra-S DNA damage checkpoint signaling	40
BP	mitotic metaphase plate congression	3
BP	mitotic nuclear division	56
BP	mitotic recombination	33
BP	mitotic recombination-dependent replication fork processing	4
BP	mitotic sister chromatid cohesion	50
BP	mitotic sister chromatid cohesion, centromeric	2
BP	mitotic sister chromatid segregation	150
BP	mitotic sister chromatid separation	3
BP	mitotic spindle assembly	15
BP	mitotic spindle assembly checkpoint signaling	28
BP	mitotic spindle disassembly	2
BP	mitotic spindle elongation	2
BP	mitotic spindle organization	40
BP	modification-dependent protein catabolic process	159
BP	modulation of process of other organism	13
BP	monocarboxylic acid metabolic process	88
BP	monocarboxylic acid transport	40
BP	monopolar spindle attachment to meiosis I kinetochore	2
BP	monosaccharide metabolic process	22
BP	morphogenesis of an epithelium	5
BP	multicellular organism development	30
BP	multivesicular body sorting pathway	18
BP	myeloid cell development	2
BP	myeloid cell differentiation	7
BP	myeloid cell homeostasis	2
BP	ncRNA processing	220
BP	ncRNA transcription	22
BP	negative regulation of ATPase activity	5
BP	negative regulation of Arp2/3 complex-mediated actin nucleation	5
BP	negative regulation of DNA binding	12
BP	negative regulation of DNA biosynthetic process	9
BP	negative regulation of DNA metabolic process	14
BP	negative regulation of DNA recombination	28
BP	negative regulation of DNA recombination at telomere	1
BP	negative regulation of DNA replication	25
BP	negative regulation of DNA-binding transcription factor activity	18
BP	negative regulation of DNA-dependent DNA replication	5
BP	negative regulation of DNA-templated transcription, elongation	2
BP	negative regulation of G protein-coupled receptor signaling pathway	10
BP	negative regulation of G1/S transition of mitotic cell cycle	42
BP	negative regulation of G2/M transition of mitotic cell cycle	25
BP	negative regulation of MAP kinase activity	10
BP	negative regulation of MAPK cascade	12
BP	negative regulation of Notch signaling pathway	6
BP	negative regulation of RNA biosynthetic process	152
BP	negative regulation of RNA catabolic process	1
BP	negative regulation of RNA splicing	1
BP	negative regulation of Ras protein signal transduction	18
BP	negative regulation of SREBP signaling pathway	1
BP	negative regulation of TOR signaling	24
BP	negative regulation of TORC1 signaling	8
BP	negative regulation of actin filament binding	4
BP	negative regulation of actin filament bundle assembly	3
BP	negative regulation of actin filament depolymerization	3
BP	negative regulation of actin filament polymerization	15
BP	negative regulation of actin nucleation	2
BP	negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway	4
BP	negative regulation of amino acid transport	1
BP	negative regulation of autophagy	48
BP	negative regulation of autophagy of mitochondrion	4
BP	negative regulation of barbed-end actin filament capping	3
BP	negative regulation of binding	12
BP	negative regulation of biosynthetic process	192
BP	negative regulation of cAMP-mediated signaling	10
BP	negative regulation of calcium-independent cell-cell adhesion	1
BP	negative regulation of calcium-mediated signaling	6
BP	negative regulation of catabolic process	10
BP	negative regulation of catalytic activity	72
BP	negative regulation of cell adhesion	7
BP	negative regulation of cell cycle	280
BP	negative regulation of cell cycle G1/S phase transition	24
BP	negative regulation of cell cycle G2/M phase transition	10
BP	negative regulation of cell cycle phase transition	17
BP	negative regulation of cell cycle process	34
BP	negative regulation of cell development	1
BP	negative regulation of cell differentiation	14
BP	negative regulation of cell division	6
BP	negative regulation of cell growth	16
BP	negative regulation of cell population proliferation	8
BP	negative regulation of cell-cell adhesion	5
BP	negative regulation of cellular biosynthetic process	96
BP	negative regulation of cellular metabolic process	121
BP	negative regulation of cellular protein catabolic process	2
BP	negative regulation of cellular protein localization	1
BP	negative regulation of cellular protein metabolic process	116
BP	negative regulation of cellular response to heat	3
BP	negative regulation of chromosome organization	20
BP	negative regulation of cyclin-dependent protein kinase activity	1
BP	negative regulation of cyclin-dependent protein serine/threonine kinase activity	5
BP	negative regulation of cytokinesis	6
BP	negative regulation of cytoplasmic translation	15
BP	negative regulation of cytoskeleton organization	6
BP	negative regulation of deoxyribonuclease activity	1
BP	negative regulation of dephosphorylation	3
BP	negative regulation of endocytosis	6
BP	negative regulation of endodeoxyribonuclease activity	1
BP	negative regulation of endopeptidase activity	6
BP	negative regulation of endoplasmic reticulum unfolded protein response	2
BP	negative regulation of exit from mitosis	2
BP	negative regulation of gene expression	824
BP	negative regulation of gene expression, epigenetic	322
BP	negative regulation of gluconeogenesis	12
BP	negative regulation of glycogen biosynthetic process	6
BP	negative regulation of growth	18
BP	negative regulation of helicase activity	2
BP	negative regulation of histone H3-K14 acetylation	2
BP	negative regulation of histone H3-K36 methylation	1
BP	negative regulation of histone H3-K4 methylation	4
BP	negative regulation of histone H3-K9 methylation	4
BP	negative regulation of histone acetylation	10
BP	negative regulation of histone methylation	2
BP	negative regulation of hydrolase activity	24
BP	negative regulation of intracellular signal transduction	39
BP	negative regulation of ion transmembrane transport	1
BP	negative regulation of ion transport	4
BP	negative regulation of kinase activity	20
BP	negative regulation of lipid biosynthetic process	8
BP	negative regulation of lipid metabolic process	4
BP	negative regulation of lipid transport	1
BP	negative regulation of mRNA 3'-end processing	1
BP	negative regulation of mRNA catabolic process	1
BP	negative regulation of mRNA polyadenylation	2
BP	negative regulation of mRNA splicing, via spliceosome	4
BP	negative regulation of macroautophagy	12
BP	negative regulation of meiotic cell cycle	33
BP	negative regulation of meiotic nuclear division	24
BP	negative regulation of microtubule depolymerization	7
BP	negative regulation of microtubule polymerization or depolymerization	2
BP	negative regulation of mitochondrion organization	4
BP	negative regulation of mitotic cell cycle	162
BP	negative regulation of mitotic cell cycle DNA replication	2
BP	negative regulation of mitotic cell cycle phase transition	51
BP	negative regulation of mitotic metaphase/anaphase transition	12
BP	negative regulation of mitotic nuclear division	32
BP	negative regulation of mitotic recombination	2
BP	negative regulation of mitotic sister chromatid separation	6
BP	negative regulation of nuclease activity	1
BP	negative regulation of nucleic acid-templated transcription	152
BP	negative regulation of oxidoreductase activity	5
BP	negative regulation of peptidase activity	3
BP	negative regulation of peptidyl-lysine acetylation	6
BP	negative regulation of phagocytosis	7
BP	negative regulation of phosphatase activity	12
BP	negative regulation of phosphatidylinositol biosynthetic process	2
BP	negative regulation of phospholipid biosynthetic process	6
BP	negative regulation of phosphoprotein phosphatase activity	15
BP	negative regulation of phosphorylation	30
BP	negative regulation of proteasomal protein catabolic process	5
BP	negative regulation of protein acetylation	6
BP	negative regulation of protein binding	28
BP	negative regulation of protein catabolic process	18
BP	negative regulation of protein dephosphorylation	9
BP	negative regulation of protein glutathionylation	2
BP	negative regulation of protein homodimerization activity	1
BP	negative regulation of protein kinase activity	45
BP	negative regulation of protein localization to kinetochore	1
BP	negative regulation of protein metabolic process	31
BP	negative regulation of protein phosphorylation	30
BP	negative regulation of protein polymerization	3
BP	negative regulation of protein polyubiquitination	1
BP	negative regulation of protein serine/threonine kinase activity	20
BP	negative regulation of protein ubiquitination	5
BP	negative regulation of protein-containing complex assembly	18
BP	negative regulation of protein-containing complex disassembly	9
BP	negative regulation of proteolysis	35
BP	negative regulation of proteolysis involved in cellular protein catabolic process	1
BP	negative regulation of response to endoplasmic reticulum stress	2
BP	negative regulation of ribosomal DNA heterochromatin assembly	2
BP	negative regulation of sequestering of calcium ion	3
BP	negative regulation of signal transduction	136
BP	negative regulation of sister chromatid cohesion	2
BP	negative regulation of small GTPase mediated signal transduction	12
BP	negative regulation of stress-activated MAPK cascade	8
BP	negative regulation of supramolecular fiber organization	6
BP	negative regulation of telomerase activity	18
BP	negative regulation of telomere maintenance	4
BP	negative regulation of telomere maintenance via recombination	3
BP	negative regulation of telomere maintenance via telomerase	6
BP	negative regulation of telomere maintenance via telomere lengthening	5
BP	negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled	1
BP	negative regulation of transcription by RNA polymerase I	1
BP	negative regulation of transcription by RNA polymerase II	396
BP	negative regulation of transcription by RNA polymerase III	2
BP	negative regulation of transcription elongation from RNA polymerase II promoter	7
BP	negative regulation of transcription from RNA polymerase II promoter by glucose	2
BP	negative regulation of transcription from RNA polymerase II promoter in response to stress	6
BP	negative regulation of transcription involved in G1/S transition of mitotic cell cycle	3
BP	negative regulation of transcription, DNA-templated	592
BP	negative regulation of translation	66
BP	negative regulation of translation in response to stress	2
BP	negative regulation of translational elongation	2
BP	negative regulation of translational frameshifting	1
BP	negative regulation of translational initiation	12
BP	negative regulation of translational initiation in response to stress	2
BP	negative regulation of transmembrane transport	2
BP	negative regulation of transport	8
BP	negative regulation of transposition	5
BP	negative regulation of transposition, RNA-mediated	1
BP	nervous system development	7
BP	neurogenesis	8
BP	neuron development	7
BP	neuron differentiation	8
BP	neuron maturation	5
BP	neuron remodeling	5
BP	neurotransmitter biosynthetic process	10
BP	neurotransmitter catabolic process	12
BP	neurotransmitter metabolic process	24
BP	neurotransmitter transport	6
BP	neutral amino acid transport	21
BP	neutral lipid metabolic process	2
BP	nicotinamide nucleotide metabolic process	27
BP	nitric oxide biosynthetic process	6
BP	nitric oxide catabolic process	1
BP	nitric oxide metabolic process	4
BP	nitrogen catabolite activation of transcription from RNA polymerase II promoter	1
BP	nitrogen compound metabolic process	1470
BP	nitrogen compound transport	344
BP	nonfunctional rRNA decay	8
BP	nuclear DNA replication	22
BP	nuclear chromosome segregation	30
BP	nuclear envelope organization	14
BP	nuclear export	148
BP	nuclear mRNA surveillance	18
BP	nuclear migration	20
BP	nuclear migration along microtubule	4
BP	nuclear polyadenylation-dependent CUT catabolic process	2
BP	nuclear polyadenylation-dependent mRNA catabolic process	10
BP	nuclear polyadenylation-dependent rRNA catabolic process	10
BP	nuclear polyadenylation-dependent tRNA catabolic process	5
BP	nuclear pore complex assembly	8
BP	nuclear pore localization	3
BP	nuclear pore organization	24
BP	nuclear protein quality control by the ubiquitin-proteasome system	1
BP	nuclear retention of pre-mRNA at the site of transcription	2
BP	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription	1
BP	nuclear retention of unspliced pre-mRNA at the site of transcription	2
BP	nuclear-transcribed mRNA catabolic process	100
BP	nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay	9
BP	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	84
BP	nuclear-transcribed mRNA catabolic process, deadenylation-independent decay	4
BP	nuclear-transcribed mRNA catabolic process, exonucleolytic	18
BP	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	18
BP	nuclear-transcribed mRNA catabolic process, no-go decay	4
BP	nuclear-transcribed mRNA catabolic process, non-stop decay	8
BP	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	70
BP	nuclear-transcribed mRNA poly(A) tail shortening	10
BP	nucleic acid phosphodiester bond hydrolysis	354
BP	nucleobase transport	2
BP	nucleobase-containing compound metabolic process	1194
BP	nucleobase-containing compound transport	53
BP	nucleobase-containing small molecule catabolic process	6
BP	nucleobase-containing small molecule metabolic process	81
BP	nucleocytoplasmic transport	322
BP	nucleolar large rRNA transcription by RNA polymerase I	16
BP	nucleolus organization	6
BP	nucleoside diphosphate biosynthetic process	1
BP	nucleoside diphosphate metabolic process	11
BP	nucleoside diphosphate phosphorylation	24
BP	nucleoside metabolic process	39
BP	nucleoside monophosphate biosynthetic process	23
BP	nucleoside monophosphate phosphorylation	2
BP	nucleoside phosphate catabolic process	18
BP	nucleoside phosphate metabolic process	67
BP	nucleoside transmembrane transport	8
BP	nucleoside transport	4
BP	nucleoside triphosphate biosynthetic process	32
BP	nucleoside triphosphate catabolic process	4
BP	nucleosome assembly	84
BP	nucleosome disassembly	12
BP	nucleosome mobilization	4
BP	nucleosome organization	87
BP	nucleosome positioning	10
BP	nucleotide biosynthetic process	160
BP	nucleotide metabolic process	201
BP	nucleotide phosphorylation	24
BP	nucleotide transport	13
BP	nucleotide-excision repair	126
BP	nucleotide-excision repair involved in interstrand cross-link repair	1
BP	nucleotide-excision repair, DNA damage recognition	2
BP	nucleotide-excision repair, DNA duplex unwinding	2
BP	nucleotide-excision repair, DNA gap filling	4
BP	nucleotide-excision repair, DNA incision	9
BP	nucleotide-excision repair, DNA incision, 5'-to lesion	12
BP	nucleotide-sugar metabolic process	10
BP	nucleus localization	10
BP	nucleus organization	102
BP	oligopeptide transmembrane transport	6
BP	oligopeptide transport	3
BP	oligosaccharide biosynthetic process	35
BP	oligosaccharide catabolic process	20
BP	oligosaccharide metabolic process	54
BP	oligosaccharide-lipid intermediate biosynthetic process	1
BP	one-carbon metabolic process	24
BP	organelle assembly	129
BP	organelle disassembly	45
BP	organelle fusion	57
BP	organelle localization	94
BP	organelle localization by membrane tethering	14
BP	organelle organization	1620
BP	organelle transport along microtubule	16
BP	organic acid metabolic process	304
BP	organic acid transmembrane transport	19
BP	organic anion transport	258
BP	organic cation transport	24
BP	organic substance transport	196
BP	organonitrogen compound catabolic process	230
BP	organophosphate catabolic process	12
BP	organophosphate metabolic process	104
BP	ornithine biosynthetic process	1
BP	ornithine metabolic process	3
BP	osmosensory signaling pathway	20
BP	oxalate transport	4
BP	oxaloacetate metabolic process	3
BP	oxaloacetate transport	2
BP	oxaloacetate(2-) transmembrane transport	1
BP	oxidative phosphorylation	36
BP	pH reduction	36
BP	pantothenate metabolic process	12
BP	parallel actin filament bundle assembly	2
BP	pentose biosynthetic process	2
BP	pentose catabolic process	2
BP	pentose metabolic process	10
BP	pentose-phosphate shunt	18
BP	pentose-phosphate shunt, non-oxidative branch	6
BP	pentose-phosphate shunt, oxidative branch	12
BP	peptide biosynthetic process	212
BP	peptide catabolic process	24
BP	peptide metabolic process	496
BP	peptide secretion	4
BP	peptide transport	695
BP	peptidyl-amino acid modification	64
BP	peptidyl-arginine N-methylation	2
BP	peptidyl-arginine methylation	2
BP	peptidyl-arginine methylation, to symmetrical-dimethyl arginine	2
BP	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	6
BP	peptidyl-glutamine methylation	2
BP	peptidyl-histidine phosphorylation	1
BP	peptidyl-lysine acetylation	32
BP	peptidyl-lysine dimethylation	3
BP	peptidyl-lysine methylation	36
BP	peptidyl-lysine modification	31
BP	peptidyl-lysine monomethylation	3
BP	peptidyl-lysine trimethylation	8
BP	peptidyl-methionine modification	3
BP	peptidyl-proline hydroxylation	27
BP	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	27
BP	peptidyl-proline modification	13
BP	peptidyl-serine dephosphorylation	5
BP	peptidyl-serine phosphorylation	112
BP	peptidyl-threonine phosphorylation	18
BP	peptidyl-tyrosine dephosphorylation	10
BP	peptidyl-tyrosine phosphorylation	8
BP	peroxisomal membrane transport	5
BP	peroxisome fission	3
BP	peroxisome organization	72
BP	phenol-containing compound metabolic process	2
BP	phenotypic switching	6
BP	phenylalanyl-tRNA aminoacylation	3
BP	phosphate ion transmembrane transport	8
BP	phosphate ion transport	20
BP	phosphate-containing compound metabolic process	1002
BP	phosphatidic acid biosynthetic process	14
BP	phosphatidic acid metabolic process	4
BP	phosphatidylcholine biosynthetic process	18
BP	phosphatidylcholine catabolic process	5
BP	phosphatidylcholine metabolic process	24
BP	phosphatidylethanolamine biosynthetic process	25
BP	phosphatidylethanolamine metabolic process	12
BP	phosphatidylglycerol metabolic process	6
BP	phosphatidylinositol biosynthetic process	40
BP	phosphatidylinositol dephosphorylation	5
BP	phosphatidylinositol metabolic process	52
BP	phosphatidylinositol phosphate biosynthetic process	24
BP	phosphatidylinositol-3-phosphate biosynthetic process	2
BP	phosphatidylinositol-mediated signaling	18
BP	phosphatidylserine biosynthetic process	6
BP	phosphatidylserine metabolic process	4
BP	phospholipid biosynthetic process	174
BP	phospholipid catabolic process	8
BP	phospholipid dephosphorylation	3
BP	phospholipid metabolic process	252
BP	phospholipid translocation	20
BP	phospholipid transport	42
BP	phosphorelay signal transduction system	2
BP	phosphorylation	518
BP	phosphorylation of RNA polymerase II C-terminal domain	12
BP	photoperiodism	2
BP	piecemeal microautophagy of the nucleus	10
BP	plasma lipoprotein particle assembly	18
BP	plasma membrane organization	30
BP	plasma membrane phospholipid scrambling	12
BP	plasma membrane selenite transport	2
BP	plasma membrane tubulation	5
BP	poly(A)+ mRNA export from nucleus	52
BP	polyadenylation-dependent snoRNA 3'-end processing	10
BP	polyamine biosynthetic process	8
BP	polyamine metabolic process	2
BP	polyamine transmembrane transport	3
BP	polyphosphate metabolic process	4
BP	polyprenol biosynthetic process	1
BP	polysaccharide catabolic process	2
BP	polysaccharide localization	1
BP	polysaccharide metabolic process	17
BP	pore complex assembly	20
BP	porphyrin-containing compound biosynthetic process	24
BP	porphyrin-containing compound metabolic process	24
BP	positive regulation of ATPase activity	30
BP	positive regulation of Arp2/3 complex-mediated actin nucleation	4
BP	positive regulation of DNA binding	10
BP	positive regulation of DNA biosynthetic process	10
BP	positive regulation of DNA damage checkpoint	2
BP	positive regulation of DNA metabolic process	10
BP	positive regulation of DNA primase activity	1
BP	positive regulation of DNA recombination	1
BP	positive regulation of DNA repair	28
BP	positive regulation of DNA replication	30
BP	positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity	4
BP	positive regulation of DNA-dependent DNA replication	6
BP	positive regulation of DNA-dependent DNA replication initiation	3
BP	positive regulation of DNA-directed DNA polymerase activity	2
BP	positive regulation of DNA-templated transcription, elongation	85
BP	positive regulation of DNA-templated transcription, initiation	8
BP	positive regulation of G1/S transition of mitotic cell cycle	36
BP	positive regulation of G2/M transition of mitotic cell cycle	10
BP	positive regulation of GTP binding	1
BP	positive regulation of GTPase activity	84
BP	positive regulation of L-arginine import across plasma membrane	1
BP	positive regulation of MAP kinase activity	32
BP	positive regulation of MAPK cascade	64
BP	positive regulation of RNA biosynthetic process	142
BP	positive regulation of RNA polymerase II transcription preinitiation complex assembly	12
BP	positive regulation of RNA splicing	10
BP	positive regulation of Ras protein signal transduction	6
BP	positive regulation of Rho guanyl-nucleotide exchange factor activity	2
BP	positive regulation of Rho protein signal transduction	6
BP	positive regulation of SREBP signaling pathway	2
BP	positive regulation of TOR signaling	18
BP	positive regulation of TORC1 signaling	6
BP	positive regulation of TORC2 signaling	1
BP	positive regulation of actin cytoskeleton reorganization	6
BP	positive regulation of actin filament bundle assembly	5
BP	positive regulation of actin filament depolymerization	10
BP	positive regulation of actin filament polymerization	32
BP	positive regulation of actin nucleation	3
BP	positive regulation of amino acid transport	2
BP	positive regulation of apoptotic process	10
BP	positive regulation of autophagosome maturation	8
BP	positive regulation of autophagy	56
BP	positive regulation of binding	9
BP	positive regulation of catalytic activity	288
BP	positive regulation of cation transmembrane transport	1
BP	positive regulation of cell adhesion	45
BP	positive regulation of cell aging	4
BP	positive regulation of cell cycle	204
BP	positive regulation of cell cycle G1/S phase transition	30
BP	positive regulation of cell cycle G2/M phase transition	6
BP	positive regulation of cell cycle checkpoint	2
BP	positive regulation of cell cycle phase transition	19
BP	positive regulation of cell cycle process	64
BP	positive regulation of cell death	14
BP	positive regulation of cell development	2
BP	positive regulation of cell differentiation	32
BP	positive regulation of cell division	64
BP	positive regulation of cell fate commitment	4
BP	positive regulation of cell growth	14
BP	positive regulation of cell population proliferation	18
BP	positive regulation of cell-substrate adhesion	30
BP	positive regulation of cellular biosynthetic process	178
BP	positive regulation of cellular component biogenesis	17
BP	positive regulation of cellular protein catabolic process	65
BP	positive regulation of cellular protein localization	12
BP	positive regulation of cellular protein metabolic process	141
BP	positive regulation of cellular response to heat	1
BP	positive regulation of cellular response to hypoxia	2
BP	positive regulation of chromosome organization	46
BP	positive regulation of chromosome segregation	24
BP	positive regulation of chromosome separation	22
BP	positive regulation of cyclin-dependent protein kinase activity	9
BP	positive regulation of cyclin-dependent protein serine/threonine kinase activity	10
BP	positive regulation of cytokinesis	30
BP	positive regulation of cytoplasmic mRNA processing body assembly	9
BP	positive regulation of cytoskeleton organization	28
BP	positive regulation of cytosolic calcium ion concentration	24
BP	positive regulation of dephosphorylation	1
BP	positive regulation of developmental growth	4
BP	positive regulation of endocytosis	21
BP	positive regulation of endopeptidase activity	15
BP	positive regulation of establishment of protein localization	6
BP	positive regulation of exit from mitosis	3
BP	positive regulation of exocytosis	12
BP	positive regulation of gene expression	858
BP	positive regulation of gene expression, epigenetic	24
BP	positive regulation of gluconeogenesis	16
BP	positive regulation of glucose metabolic process	16
BP	positive regulation of glutamate metabolic process	1
BP	positive regulation of growth	80
BP	positive regulation of histone H3-K36 methylation	1
BP	positive regulation of histone H3-K36 trimethylation	2
BP	positive regulation of histone H3-K4 methylation	4
BP	positive regulation of histone H3-K9 dimethylation	3
BP	positive regulation of histone H3-K9 methylation	4
BP	positive regulation of histone H3-K9 trimethylation	2
BP	positive regulation of histone acetylation	28
BP	positive regulation of histone methylation	6
BP	positive regulation of histone modification	7
BP	positive regulation of hydrogen peroxide-induced cell death	1
BP	positive regulation of hydrogen peroxide-mediated programmed cell death	3
BP	positive regulation of hydrolase activity	46
BP	positive regulation of immune response	10
BP	positive regulation of immune system process	2
BP	positive regulation of intracellular protein transport	3
BP	positive regulation of intracellular signal transduction	48
BP	positive regulation of intracellular transport	6
BP	positive regulation of ion transmembrane transport	2
BP	positive regulation of ion transport	4
BP	positive regulation of kinase activity	55
BP	positive regulation of ligase activity	5
BP	positive regulation of lipid biosynthetic process	12
BP	positive regulation of lipid metabolic process	2
BP	positive regulation of mRNA catabolic process	6
BP	positive regulation of mRNA splicing, via spliceosome	6
BP	positive regulation of macroautophagy	42
BP	positive regulation of macromolecule biosynthetic process	83
BP	positive regulation of meiosis I	1
BP	positive regulation of meiotic nuclear division	3
BP	positive regulation of metabolic process	248
BP	positive regulation of mitochondrial DNA metabolic process	2
BP	positive regulation of mitochondrial DNA replication	4
BP	positive regulation of mitochondrial fusion	3
BP	positive regulation of mitochondrial translation	15
BP	positive regulation of mitochondrion organization	9
BP	positive regulation of mitotic DNA damage checkpoint	2
BP	positive regulation of mitotic cell cycle	130
BP	positive regulation of mitotic cell cycle phase transition	38
BP	positive regulation of mitotic cytokinesis	3
BP	positive regulation of mitotic cytokinetic process	6
BP	positive regulation of mitotic metaphase/anaphase transition	33
BP	positive regulation of mitotic nuclear division	78
BP	positive regulation of nitric oxide biosynthetic process	9
BP	positive regulation of nitric oxide metabolic process	1
BP	positive regulation of nitrogen compound metabolic process	226
BP	positive regulation of nuclear cell cycle DNA replication	9
BP	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	6
BP	positive regulation of nucleic acid-templated transcription	70
BP	positive regulation of nucleocytoplasmic transport	2
BP	positive regulation of organelle assembly	3
BP	positive regulation of organelle organization	82
BP	positive regulation of oxidative stress-induced cell death	1
BP	positive regulation of oxidoreductase activity	3
BP	positive regulation of peptidase activity	18
BP	positive regulation of peptidyl-lysine acetylation	4
BP	positive regulation of phosphatase activity	3
BP	positive regulation of phospholipid biosynthetic process	6
BP	positive regulation of phosphorylation	114
BP	positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues	2
BP	positive regulation of programmed cell death	12
BP	positive regulation of proteasomal protein catabolic process	91
BP	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	104
BP	positive regulation of protein acetylation	8
BP	positive regulation of protein autophosphorylation	12
BP	positive regulation of protein binding	5
BP	positive regulation of protein catabolic process	126
BP	positive regulation of protein depolymerization	2
BP	positive regulation of protein export from nucleus	5
BP	positive regulation of protein kinase activity	110
BP	positive regulation of protein localization to nucleus	6
BP	positive regulation of protein maturation	1
BP	positive regulation of protein metabolic process	192
BP	positive regulation of protein modification process	104
BP	positive regulation of protein phosphorylation	152
BP	positive regulation of protein polymerization	8
BP	positive regulation of protein processing	6
BP	positive regulation of protein serine/threonine kinase activity	49
BP	positive regulation of protein sumoylation	5
BP	positive regulation of protein transport	6
BP	positive regulation of protein-containing complex assembly	55
BP	positive regulation of protein-containing complex disassembly	8
BP	positive regulation of proteolysis	60
BP	positive regulation of proteolysis involved in cellular protein catabolic process	39
BP	positive regulation of rRNA processing	2
BP	positive regulation of reactive oxygen species biosynthetic process	4
BP	positive regulation of reactive oxygen species metabolic process	6
BP	positive regulation of receptor internalization	5
BP	positive regulation of receptor-mediated endocytosis	14
BP	positive regulation of reciprocal meiotic recombination	4
BP	positive regulation of replicative senescence	2
BP	positive regulation of response to DNA damage stimulus	16
BP	positive regulation of response to oxidative stress	2
BP	positive regulation of secretion	8
BP	positive regulation of signal transduction	70
BP	positive regulation of sister chromatid cohesion	2
BP	positive regulation of small GTPase mediated signal transduction	3
BP	positive regulation of sodium ion transport	5
BP	positive regulation of stress-activated MAPK cascade	20
BP	positive regulation of stress-activated protein kinase signaling cascade	8
BP	positive regulation of supramolecular fiber organization	6
BP	positive regulation of telomere maintenance	3
BP	positive regulation of telomere maintenance via telomerase	6
BP	positive regulation of telomere maintenance via telomere lengthening	2
BP	positive regulation of transcription by RNA polymerase I	24
BP	positive regulation of transcription by RNA polymerase II	616
BP	positive regulation of transcription by RNA polymerase III	10
BP	positive regulation of transcription elongation from RNA polymerase II promoter	90
BP	positive regulation of transcription from RNA polymerase II promoter by galactose	1
BP	positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance	1
BP	positive regulation of transcription from RNA polymerase II promoter in response to calcium ion	1
BP	positive regulation of transcription from RNA polymerase II promoter in response to heat stress	2
BP	positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress	4
BP	positive regulation of transcription from RNA polymerase II promoter in response to stress	24
BP	positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus	20
BP	positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	3
BP	positive regulation of transcription initiation from RNA polymerase II promoter	24
BP	positive regulation of transcription involved in G1/S transition of mitotic cell cycle	6
BP	positive regulation of transcription involved in G2/M transition of mitotic cell cycle	1
BP	positive regulation of transcription, DNA-templated	594
BP	positive regulation of translation	63
BP	positive regulation of translational initiation	6
BP	positive regulation of translational initiation in response to starvation	1
BP	positive regulation of translational initiation in response to stress	1
BP	positive regulation of transport	10
BP	positive regulation of ubiquitin-dependent endocytosis	2
BP	positive regulation of ubiquitin-dependent protein catabolic process	12
BP	positive regulation of vacuole organization	2
BP	positive regulation of viral entry into host cell	27
BP	positive regulation of viral life cycle	9
BP	positive regulation of viral process	27
BP	post-Golgi vesicle-mediated transport	114
BP	post-chaperonin tubulin folding pathway	3
BP	post-embryonic animal organ development	1
BP	post-embryonic animal organ morphogenesis	1
BP	post-embryonic development	6
BP	post-translational protein modification	54
BP	postreplication repair	48
BP	posttranscriptional regulation of gene expression	195
BP	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	1
BP	posttranslational protein targeting to endoplasmic reticulum membrane	2
BP	potassium ion export across plasma membrane	6
BP	potassium ion homeostasis	15
BP	potassium ion transmembrane transport	56
BP	potassium ion transport	40
BP	pre-mRNA catabolic process	1
BP	pre-mRNA cleavage required for polyadenylation	12
BP	programmed cell death	40
BP	programmed cell death in response to reactive oxygen species	1
BP	proline biosynthetic process	2
BP	proline catabolic process	3
BP	proline catabolic process to glutamate	2
BP	proline metabolic process	2
BP	proline transmembrane transport	4
BP	proline transport	6
BP	prolyl-tRNA aminoacylation	4
BP	proteasomal protein catabolic process	196
BP	proteasomal ubiquitin-independent protein catabolic process	21
BP	proteasome assembly	40
BP	proteasome core complex assembly	2
BP	proteasome regulatory particle assembly	6
BP	proteasome-mediated ubiquitin-dependent protein catabolic process	352
BP	protein K63-linked ubiquitination	28
BP	protein N-linked glycosylation	70
BP	protein N-linked glycosylation via asparagine	14
BP	protein O-linked glycosylation	21
BP	protein O-linked mannosylation	15
BP	protein acetylation	108
BP	protein acylation	18
BP	protein alpha-1,2-demannosylation	18
BP	protein arginylation	3
BP	protein autophosphorylation	24
BP	protein autoprocessing	14
BP	protein autosumoylation	1
BP	protein biotinylation	2
BP	protein catabolic process	672
BP	protein catabolic process in the vacuole	8
BP	protein complex oligomerization	8
BP	protein deacetylation	20
BP	protein deglycosylation	55
BP	protein demethylation	3
BP	protein deneddylation	3
BP	protein dephosphorylation	88
BP	protein depolymerization	3
BP	protein desumoylation	4
BP	protein deubiquitination	18
BP	protein exit from endoplasmic reticulum	12
BP	protein export from nucleus	296
BP	protein farnesylation	2
BP	protein folding	287
BP	protein folding in endoplasmic reticulum	36
BP	protein glycosylation	119
BP	protein glycosylation in endoplasmic reticulum	3
BP	protein homooligomerization	6
BP	protein hydroxylation	18
BP	protein import	99
BP	protein import into mitochondrial intermembrane space	8
BP	protein import into mitochondrial matrix	55
BP	protein import into nucleus	77
BP	protein import into peroxisome matrix	30
BP	protein import into peroxisome matrix, docking	4
BP	protein initiator methionine removal	2
BP	protein insertion into ER membrane	6
BP	protein insertion into membrane	16
BP	protein insertion into mitochondrial inner membrane	20
BP	protein insertion into mitochondrial inner membrane from matrix	4
BP	protein insertion into mitochondrial membrane	4
BP	protein insertion into mitochondrial outer membrane	4
BP	protein lipidation	35
BP	protein lipoylation	5
BP	protein localization	1638
BP	protein localization to Golgi apparatus	12
BP	protein localization to cell cortex	12
BP	protein localization to cell periphery	12
BP	protein localization to cell surface	5
BP	protein localization to chromatin	9
BP	protein localization to chromosome	26
BP	protein localization to chromosome, centromeric region	21
BP	protein localization to chromosome, telomeric region	5
BP	protein localization to cytoskeleton	9
BP	protein localization to endoplasmic reticulum	30
BP	protein localization to endoplasmic reticulum exit site	2
BP	protein localization to heterochromatin	2
BP	protein localization to kinetochore	24
BP	protein localization to kinetochore involved in kinetochore assembly	1
BP	protein localization to membrane	125
BP	protein localization to mitochondrion	95
BP	protein localization to nuclear envelope	3
BP	protein localization to nuclear inner membrane	1
BP	protein localization to nucleus	65
BP	protein localization to organelle	564
BP	protein localization to phagophore assembly site	12
BP	protein localization to plasma membrane	48
BP	protein localization to vacuolar membrane	1
BP	protein localization to vacuole	50
BP	protein mannosylation	15
BP	protein maturation	273
BP	protein maturation by [2Fe-2S] cluster transfer	2
BP	protein maturation by [4Fe-4S] cluster transfer	12
BP	protein maturation by iron-sulfur cluster transfer	16
BP	protein metabolic process	694
BP	protein methylation	55
BP	protein modification by small protein conjugation	96
BP	protein modification by small protein removal	10
BP	protein modification process	166
BP	protein monoubiquitination	25
BP	protein neddylation	6
BP	protein peptidyl-prolyl isomerization	20
BP	protein phosphorylation	370
BP	protein polymerization	30
BP	protein polyubiquitination	60
BP	protein prenylation	2
BP	protein processing	182
BP	protein quality control for misfolded or incompletely synthesized proteins	65
BP	protein refolding	35
BP	protein retention in ER lumen	6
BP	protein secretion	32
BP	protein stabilization	20
BP	protein sumoylation	24
BP	protein targeting	344
BP	protein targeting to ER	32
BP	protein targeting to membrane	63
BP	protein targeting to mitochondrion	162
BP	protein targeting to peroxisome	35
BP	protein targeting to vacuole	22
BP	protein targeting to vacuole involved in autophagy	1
BP	protein transmembrane transport	48
BP	protein transport	945
BP	protein transport along microtubule	8
BP	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	2
BP	protein ubiquitination	225
BP	protein unfolding	2
BP	protein urmylation	2
BP	protein-DNA complex assembly	56
BP	protein-DNA complex disassembly	3
BP	protein-containing complex assembly	980
BP	protein-containing complex disassembly	24
BP	protein-containing complex localization	43
BP	protein-containing complex subunit organization	177
BP	protein-lipid complex assembly	10
BP	proteolysis	1008
BP	proteolysis involved in cellular protein catabolic process	402
BP	proton transmembrane transport	192
BP	proton-transporting ATP synthase complex assembly	1
BP	proton-transporting V-type ATPase complex assembly	4
BP	pseudouridine synthesis	8
BP	pteridine-containing compound biosynthetic process	3
BP	pteridine-containing compound metabolic process	3
BP	purine nucleobase biosynthetic process	16
BP	purine nucleobase metabolic process	12
BP	purine nucleobase transport	1
BP	purine nucleoside catabolic process	4
BP	purine nucleoside metabolic process	16
BP	purine nucleotide biosynthetic process	140
BP	purine nucleotide catabolic process	4
BP	purine nucleotide metabolic process	132
BP	purine nucleotide salvage	1
BP	purine nucleotide transport	9
BP	purine ribonucleoside catabolic process	3
BP	purine ribonucleoside monophosphate biosynthetic process	38
BP	purine ribonucleoside salvage	6
BP	purine ribonucleotide catabolic process	2
BP	purine ribonucleotide transport	9
BP	purine-containing compound salvage	6
BP	purine-containing compound transmembrane transport	4
BP	putrescine transport	2
BP	pyridoxal 5'-phosphate salvage	4
BP	pyridoxal phosphate biosynthetic process	2
BP	pyridoxine biosynthetic process	2
BP	pyrimidine deoxyribonucleotide catabolic process	2
BP	pyrimidine nucleobase biosynthetic process	3
BP	pyrimidine nucleobase metabolic process	5
BP	pyrimidine nucleobase transport	3
BP	pyrimidine nucleoside catabolic process	2
BP	pyrimidine nucleoside metabolic process	20
BP	pyrimidine nucleoside salvage	2
BP	pyrimidine nucleoside transport	1
BP	pyrimidine nucleotide biosynthetic process	5
BP	pyrimidine nucleotide import into mitochondrion	3
BP	pyrimidine nucleotide metabolic process	15
BP	pyrimidine nucleotide transport	1
BP	pyrimidine nucleotide-sugar transmembrane transport	1
BP	pyrimidine ribonucleotide biosynthetic process	4
BP	pyrimidine-containing compound salvage	5
BP	pyrimidine-containing compound transmembrane transport	6
BP	pyruvate biosynthetic process	21
BP	pyruvate metabolic process	42
BP	pyruvate transmembrane transport	2
BP	quaternary ammonium group transport	2
BP	quinone metabolic process	16
BP	rDNA heterochromatin assembly	21
BP	rRNA (guanine-N7)-methylation	2
BP	rRNA 2'-O-methylation	1
BP	rRNA 3'-end processing	9
BP	rRNA base methylation	6
BP	rRNA catabolic process	45
BP	rRNA export from nucleus	10
BP	rRNA metabolic process	196
BP	rRNA methylation	36
BP	rRNA modification	12
BP	rRNA processing	656
BP	rRNA pseudouridine synthesis	8
BP	rRNA transcription	78
BP	rRNA transport	5
BP	re-entry into mitotic cell cycle	2
BP	reactive oxygen species biosynthetic process	3
BP	reactive oxygen species metabolic process	40
BP	receptor catabolic process	5
BP	receptor metabolic process	2
BP	receptor recycling	5
BP	receptor-mediated endocytosis	40
BP	reciprocal meiotic recombination	42
BP	recombinational repair	54
BP	recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex	2
BP	reductive iron assimilation	6
BP	regulation of ATP biosynthetic process	2
BP	regulation of ATP metabolic process	2
BP	regulation of ATPase activity	30
BP	regulation of Arp2/3 complex-mediated actin nucleation	8
BP	regulation of COPII vesicle coating	2
BP	regulation of DNA binding	15
BP	regulation of DNA biosynthetic process	6
BP	regulation of DNA damage checkpoint	10
BP	regulation of DNA recombination	27
BP	regulation of DNA repair	18
BP	regulation of DNA replication	140
BP	regulation of DNA strand resection involved in replication fork processing	2
BP	regulation of DNA-binding transcription factor activity	18
BP	regulation of DNA-dependent DNA replication	18
BP	regulation of DNA-dependent DNA replication initiation	40
BP	regulation of DNA-templated transcription in response to stress	48
BP	regulation of DNA-templated transcription, elongation	108
BP	regulation of ER to Golgi vesicle-mediated transport	8
BP	regulation of G protein-coupled receptor signaling pathway	14
BP	regulation of G1/S transition of mitotic cell cycle	48
BP	regulation of G2/M transition of mitotic cell cycle	70
BP	regulation of GTP binding	1
BP	regulation of GTPase activity	120
BP	regulation of L-arginine import	1
BP	regulation of MAP kinase activity	30
BP	regulation of MAPK cascade	50
BP	regulation of Notch signaling pathway	6
BP	regulation of RNA biosynthetic process	465
BP	regulation of RNA export from nucleus	1
BP	regulation of RNA metabolic process	501
BP	regulation of RNA polymerase II transcription preinitiation complex assembly	6
BP	regulation of RNA splicing	15
BP	regulation of Ras protein signal transduction	20
BP	regulation of Rho guanyl-nucleotide exchange factor activity	1
BP	regulation of Rho protein signal transduction	6
BP	regulation of SNARE complex assembly	6
BP	regulation of SREBP signaling pathway	4
BP	regulation of TOR signaling	56
BP	regulation of TORC1 signaling	4
BP	regulation of actin binding	2
BP	regulation of actin cytoskeleton organization	120
BP	regulation of actin cytoskeleton reorganization	5
BP	regulation of actin filament bundle assembly	2
BP	regulation of actin filament depolymerization	6
BP	regulation of actin filament length	20
BP	regulation of actin filament organization	33
BP	regulation of actin filament polymerization	50
BP	regulation of actin filament-based process	30
BP	regulation of actin nucleation	4
BP	regulation of actin polymerization or depolymerization	40
BP	regulation of adenylate cyclase activity	2
BP	regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway	2
BP	regulation of anion transport	12
BP	regulation of apoptotic process	104
BP	regulation of apoptotic signaling pathway	9
BP	regulation of arginine metabolic process	1
BP	regulation of autophagosome assembly	5
BP	regulation of autophagosome maturation	6
BP	regulation of autophagy	126
BP	regulation of autophagy of mitochondrion	12
BP	regulation of barbed-end actin filament capping	4
BP	regulation of binding	16
BP	regulation of cAMP-mediated signaling	6
BP	regulation of calcium-mediated signaling	24
BP	regulation of cardiolipin metabolic process	1
BP	regulation of catalytic activity	405
BP	regulation of cation transmembrane transport	4
BP	regulation of cell adhesion	42
BP	regulation of cell cycle	720
BP	regulation of cell cycle G1/S phase transition	48
BP	regulation of cell cycle G2/M phase transition	42
BP	regulation of cell cycle phase transition	90
BP	regulation of cell cycle process	234
BP	regulation of cell death	28
BP	regulation of cell differentiation	48
BP	regulation of cell division	32
BP	regulation of cell fate commitment	2
BP	regulation of cell growth	99
BP	regulation of cell morphogenesis	48
BP	regulation of cell population proliferation	24
BP	regulation of cell projection assembly	8
BP	regulation of cell projection organization	8
BP	regulation of cell shape	84
BP	regulation of cell size	45
BP	regulation of cell-cell adhesion	5
BP	regulation of cell-substrate adhesion	10
BP	regulation of cellular amino acid metabolic process	3
BP	regulation of cellular component organization	262
BP	regulation of cellular component size	20
BP	regulation of cellular ketone metabolic process	18
BP	regulation of cellular localization	57
BP	regulation of cellular pH	45
BP	regulation of cellular process	388
BP	regulation of cellular protein catabolic process	4
BP	regulation of cellular protein localization	48
BP	regulation of cellular protein metabolic process	288
BP	regulation of cellular respiration	4
BP	regulation of cellular response to drug	4
BP	regulation of cellular response to heat	24
BP	regulation of cellular response to hypoxia	3
BP	regulation of cellular response to oxidative stress	50
BP	regulation of cellular response to stress	172
BP	regulation of centromere complex assembly	2
BP	regulation of cholesterol biosynthetic process	4
BP	regulation of cholesterol metabolic process	6
BP	regulation of chromatin assembly	21
BP	regulation of chromatin assembly or disassembly	14
BP	regulation of chromatin organization	104
BP	regulation of chromosome organization	147
BP	regulation of chromosome segregation	110
BP	regulation of chromosome separation	34
BP	regulation of circadian rhythm	7
BP	regulation of cohesin loading	2
BP	regulation of cyclase activity	1
BP	regulation of cyclin-dependent protein serine/threonine kinase activity	30
BP	regulation of cytokinesis	48
BP	regulation of cytoplasmic translation	27
BP	regulation of cytoskeleton organization	144
BP	regulation of cytosolic calcium ion concentration	24
BP	regulation of dephosphorylation	44
BP	regulation of developmental growth	2
BP	regulation of developmental process	25
BP	regulation of endocytosis	32
BP	regulation of endodeoxyribonuclease activity	2
BP	regulation of endopeptidase activity	12
BP	regulation of endoplasmic reticulum unfolded protein response	6
BP	regulation of endosome size	3
BP	regulation of entry of bacterium into host cell	2
BP	regulation of establishment of bipolar cell polarity	1
BP	regulation of establishment of cell polarity	5
BP	regulation of establishment of protein localization	28
BP	regulation of establishment of protein localization to chromosome	4
BP	regulation of establishment or maintenance of cell polarity	24
BP	regulation of exit from mitosis	42
BP	regulation of exocyst localization	1
BP	regulation of exocytosis	42
BP	regulation of gene expression	1680
BP	regulation of gene expression, epigenetic	245
BP	regulation of gene silencing	13
BP	regulation of generation of precursor metabolites and energy	5
BP	regulation of gluconeogenesis	36
BP	regulation of glucose metabolic process	63
BP	regulation of glutamate metabolic process	1
BP	regulation of glutamine family amino acid metabolic process	2
BP	regulation of glycogen biosynthetic process	15
BP	regulation of glycogen metabolic process	9
BP	regulation of glycolytic process	6
BP	regulation of glycoprotein biosynthetic process	2
BP	regulation of growth	90
BP	regulation of histone H2B conserved C-terminal lysine ubiquitination	2
BP	regulation of histone H3-K14 acetylation	2
BP	regulation of histone H3-K36 methylation	4
BP	regulation of histone H3-K36 trimethylation	2
BP	regulation of histone H3-K4 methylation	21
BP	regulation of histone H3-K9 methylation	2
BP	regulation of histone H3-K9 trimethylation	1
BP	regulation of histone acetylation	18
BP	regulation of histone methylation	30
BP	regulation of histone modification	42
BP	regulation of histone ubiquitination	2
BP	regulation of hydrogen peroxide-induced cell death	1
BP	regulation of immune response	12
BP	regulation of immune system process	8
BP	regulation of intracellular pH	90
BP	regulation of intracellular protein transport	20
BP	regulation of intracellular signal transduction	152
BP	regulation of intracellular transport	30
BP	regulation of intrinsic apoptotic signaling pathway	45
BP	regulation of ion transmembrane transport	6
BP	regulation of ion transport	5
BP	regulation of iron ion transport	2
BP	regulation of isoprenoid metabolic process	1
BP	regulation of ketone biosynthetic process	2
BP	regulation of kinase activity	60
BP	regulation of lipid biosynthetic process	40
BP	regulation of lipid metabolic process	105
BP	regulation of lipid transport	6
BP	regulation of localization	48
BP	regulation of mRNA 3'-end processing	4
BP	regulation of mRNA export from nucleus	3
BP	regulation of mRNA polyadenylation	1
BP	regulation of mRNA processing	28
BP	regulation of mRNA splicing, via spliceosome	10
BP	regulation of mRNA stability	28
BP	regulation of mRNA stability involved in response to oxidative stress	2
BP	regulation of mRNA stability involved in response to stress	2
BP	regulation of macroautophagy	45
BP	regulation of meiosis I	18
BP	regulation of meiotic cell cycle	66
BP	regulation of meiotic nuclear division	11
BP	regulation of membrane lipid distribution	28
BP	regulation of membrane permeability	8
BP	regulation of membrane potential	15
BP	regulation of metabolic process	558
BP	regulation of microtubule cytoskeleton organization	28
BP	regulation of microtubule depolymerization	1
BP	regulation of microtubule polymerization or depolymerization	3
BP	regulation of microtubule-based process	15
BP	regulation of mitochondrial DNA metabolic process	2
BP	regulation of mitochondrial DNA replication	2
BP	regulation of mitochondrial fusion	1
BP	regulation of mitochondrial membrane permeability	10
BP	regulation of mitochondrial membrane potential	7
BP	regulation of mitochondrial translation	9
BP	regulation of mitochondrion organization	36
BP	regulation of mitotic cell cycle	448
BP	regulation of mitotic cell cycle DNA replication	4
BP	regulation of mitotic cell cycle phase transition	180
BP	regulation of mitotic cytokinesis	15
BP	regulation of mitotic metaphase/anaphase transition	68
BP	regulation of mitotic nuclear division	189
BP	regulation of mitotic recombination	4
BP	regulation of mitotic sister chromatid separation	17
BP	regulation of mitotic spindle organization	10
BP	regulation of neurotransmitter levels	24
BP	regulation of nitric oxide biosynthetic process	2
BP	regulation of nitrogen utilization	1
BP	regulation of nuclear cell cycle DNA replication	21
BP	regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	4
BP	regulation of nucleic acid-templated transcription	310
BP	regulation of nucleocytoplasmic transport	28
BP	regulation of nucleotide-excision repair	4
BP	regulation of organelle assembly	10
BP	regulation of organelle organization	100
BP	regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	9
BP	regulation of oxidoreductase activity	2
BP	regulation of pH	75
BP	regulation of peptidase activity	8
BP	regulation of phagocytosis	5
BP	regulation of phenotypic switching	4
BP	regulation of phosphatase activity	28
BP	regulation of phosphatidylinositol dephosphorylation	8
BP	regulation of phospholipid biosynthetic process	6
BP	regulation of phospholipid metabolic process	22
BP	regulation of phosphoprotein phosphatase activity	24
BP	regulation of phosphorylation	150
BP	regulation of phosphorylation of RNA polymerase II C-terminal domain	8
BP	regulation of plasma lipoprotein particle levels	9
BP	regulation of plasma membrane bounded cell projection organization	6
BP	regulation of primary metabolic process	252
BP	regulation of programmed cell death	42
BP	regulation of proteasomal protein catabolic process	24
BP	regulation of proteasomal ubiquitin-dependent protein catabolic process	8
BP	regulation of protein autophosphorylation	6
BP	regulation of protein binding	30
BP	regulation of protein catabolic process	42
BP	regulation of protein dephosphorylation	12
BP	regulation of protein export from nucleus	20
BP	regulation of protein glycosylation	2
BP	regulation of protein kinase activity	114
BP	regulation of protein localization	133
BP	regulation of protein localization to chromatin	1
BP	regulation of protein localization to nucleus	3
BP	regulation of protein metabolic process	300
BP	regulation of protein phosphorylation	196
BP	regulation of protein polyubiquitination	1
BP	regulation of protein processing	6
BP	regulation of protein serine/threonine kinase activity	39
BP	regulation of protein serine/threonine phosphatase activity	2
BP	regulation of protein stability	27
BP	regulation of protein sumoylation	1
BP	regulation of protein transport	15
BP	regulation of protein ubiquitination	15
BP	regulation of protein-containing complex assembly	125
BP	regulation of protein-containing complex disassembly	14
BP	regulation of proteolysis	98
BP	regulation of purine nucleotide metabolic process	2
BP	regulation of pyruvate dehydrogenase activity	1
BP	regulation of rRNA processing	3
BP	regulation of reactive oxygen species biosynthetic process	5
BP	regulation of reactive oxygen species metabolic process	6
BP	regulation of receptor internalization	4
BP	regulation of receptor-mediated endocytosis	6
BP	regulation of response to DNA damage stimulus	24
BP	regulation of response to drug	6
BP	regulation of response to endoplasmic reticulum stress	18
BP	regulation of response to osmotic stress	3
BP	regulation of response to oxidative stress	10
BP	regulation of response to reactive oxygen species	1
BP	regulation of retrograde vesicle-mediated transport, Golgi to ER	2
BP	regulation of ribosome biogenesis	1
BP	regulation of ruffle assembly	3
BP	regulation of secretion	14
BP	regulation of sequestering of calcium ion	3
BP	regulation of sequestering of zinc ion	8
BP	regulation of signal transduction	342
BP	regulation of signal transduction by p53 class mediator	6
BP	regulation of signaling	58
BP	regulation of sister chromatid cohesion	1
BP	regulation of sister chromatid segregation	42
BP	regulation of small GTPase mediated signal transduction	24
BP	regulation of sodium ion transport	4
BP	regulation of steroid biosynthetic process	8
BP	regulation of steroid metabolic process	4
BP	regulation of stress-activated MAPK cascade	30
BP	regulation of stress-activated protein kinase signaling cascade	6
BP	regulation of supramolecular fiber organization	12
BP	regulation of telomerase activity	12
BP	regulation of telomere maintenance	20
BP	regulation of telomere maintenance via telomerase	18
BP	regulation of telomere maintenance via telomere lengthening	6
BP	regulation of transcription by RNA polymerase I	22
BP	regulation of transcription by RNA polymerase II	1155
BP	regulation of transcription by RNA polymerase III	20
BP	regulation of transcription by glucose	6
BP	regulation of transcription elongation from RNA polymerase II promoter	48
BP	regulation of transcription from RNA polymerase II promoter by glucose	2
BP	regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance	1
BP	regulation of transcription from RNA polymerase II promoter in response to iron	2
BP	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	15
BP	regulation of transcription from RNA polymerase II promoter in response to stress	36
BP	regulation of transcription initiation from RNA polymerase II promoter	7
BP	regulation of transcription involved in G1/S transition of mitotic cell cycle	35
BP	regulation of transcription involved in G2/M transition of mitotic cell cycle	2
BP	regulation of transcription, DNA-templated	1216
BP	regulation of transcription-coupled nucleotide-excision repair	2
BP	regulation of translation	252
BP	regulation of translation in response to stress	2
BP	regulation of translational elongation	12
BP	regulation of translational fidelity	6
BP	regulation of translational initiation	63
BP	regulation of translational initiation in response to stress	1
BP	regulation of translational termination	25
BP	regulation of transport	64
BP	regulation of ubiquinone biosynthetic process	2
BP	regulation of ubiquitin-dependent protein catabolic process	6
BP	regulation of vacuole organization	8
BP	regulation of vesicle fusion	8
BP	regulation of vesicle targeting, to, from or within Golgi	1
BP	regulation of vesicle-mediated transport	85
BP	regulation of viral entry into host cell	18
BP	regulation of viral life cycle	9
BP	regulation of viral process	9
BP	release of sequestered calcium ion into cytosol	18
BP	removal of superoxide radicals	18
BP	replication fork arrest	2
BP	replication fork processing	15
BP	replication fork reversal	1
BP	replication-born double-strand break repair via sister chromatid exchange	9
BP	reproduction	180
BP	reproductive process	252
BP	reproductive structure development	4
BP	reproductive system development	4
BP	rescue of stalled ribosome	6
BP	resolution of meiotic recombination intermediates	4
BP	resolution of mitotic recombination intermediates	2
BP	resolution of recombination intermediates	1
BP	respiratory chain complex IV assembly	24
BP	respiratory electron transport chain	48
BP	response to DNA damage checkpoint signaling	4
BP	response to UV	64
BP	response to UV-B	3
BP	response to UV-C	3
BP	response to acetate	2
BP	response to acidic pH	16
BP	response to alcohol	18
BP	response to alkaline pH	2
BP	response to alkaloid	1
BP	response to amino acid	4
BP	response to amino acid starvation	10
BP	response to anesthetic	1
BP	response to antibiotic	95
BP	response to arsenic-containing substance	6
BP	response to blue light	4
BP	response to cadmium ion	6
BP	response to caffeine	3
BP	response to calcium ion	6
BP	response to carbohydrate	6
BP	response to carbon dioxide	1
BP	response to cold	12
BP	response to copper ion	9
BP	response to cytokine	63
BP	response to decreased oxygen levels	10
BP	response to endoplasmic reticulum stress	312
BP	response to external biotic stimulus	18
BP	response to extracellular stimulus	212
BP	response to fatty acid	4
BP	response to fungicide	1
BP	response to glucose	6
BP	response to heat	150
BP	response to hormone	16
BP	response to hydrogen peroxide	40
BP	response to hyperoxia	2
BP	response to hypoxia	80
BP	response to inorganic substance	54
BP	response to interleukin-12	18
BP	response to intra-S DNA damage checkpoint signaling	1
BP	response to ionizing radiation	6
BP	response to iron ion	8
BP	response to light stimulus	50
BP	response to lipid	48
BP	response to lithium ion	1
BP	response to mechanical stimulus	5
BP	response to metal ion	65
BP	response to methylglyoxal	1
BP	response to methylmercury	2
BP	response to misfolded protein	22
BP	response to nitric oxide	6
BP	response to nitrosative stress	2
BP	response to nutrient	55
BP	response to nutrient levels	204
BP	response to oleic acid	1
BP	response to organic cyclic compound	15
BP	response to organic substance	504
BP	response to organonitrogen compound	30
BP	response to osmotic stress	198
BP	response to other organism	18
BP	response to oxidative stress	477
BP	response to oxygen radical	3
BP	response to pH	54
BP	response to pheromone	16
BP	response to purine-containing compound	2
BP	response to radiation	66
BP	response to reactive oxygen species	98
BP	response to salt stress	24
BP	response to singlet oxygen	1
BP	response to starvation	210
BP	response to steroid hormone	6
BP	response to sterol depletion	4
BP	response to stimulus	332
BP	response to superoxide	9
BP	response to temperature stimulus	108
BP	response to toxic substance	162
BP	response to unfolded protein	84
BP	response to water	3
BP	response to water deprivation	3
BP	response to xenobiotic stimulus	14
BP	response to zinc ion	8
BP	reticulophagy	15
BP	retrograde protein transport, ER to cytosol	6
BP	retrograde transport, endosome to Golgi	54
BP	retrograde transport, vesicle recycling within Golgi	4
BP	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	112
BP	rhythmic process	3
BP	riboflavin biosynthetic process	4
BP	riboflavin metabolic process	8
BP	riboflavin transport	3
BP	ribonucleoprotein complex assembly	104
BP	ribonucleoprotein complex biogenesis	143
BP	ribonucleoprotein complex localization	37
BP	ribonucleoside monophosphate biosynthetic process	42
BP	ribonucleotide metabolic process	46
BP	ribose phosphate biosynthetic process	64
BP	ribose phosphate metabolic process	104
BP	ribosomal large subunit assembly	48
BP	ribosomal large subunit biogenesis	150
BP	ribosomal large subunit export from nucleus	12
BP	ribosomal small subunit assembly	21
BP	ribosomal small subunit biogenesis	180
BP	ribosomal small subunit export from nucleus	12
BP	ribosomal subunit export from nucleus	22
BP	ribosome assembly	132
BP	ribosome biogenesis	819
BP	ribosome disassembly	9
BP	ribosome-associated ubiquitin-dependent protein catabolic process	4
BP	second-messenger-mediated signaling	2
BP	secondary metabolic process	5
BP	secretion	44
BP	secretion by cell	44
BP	secretory granule organization	2
BP	selective autophagy	10
BP	selenocysteine metabolic process	1
BP	septin cytoskeleton organization	8
BP	septin ring assembly	2
BP	septin ring organization	3
BP	sequestering of actin monomers	8
BP	sequestering of calcium ion	5
BP	serine family amino acid biosynthetic process	5
BP	serine family amino acid catabolic process	8
BP	serine family amino acid metabolic process	11
BP	seryl-tRNA aminoacylation	4
BP	sex determination	42
BP	sex differentiation	5
BP	sexual reproduction	190
BP	signal peptide processing	20
BP	signal transduction	760
BP	signal transduction by p53 class mediator	2
BP	signal transduction in response to DNA damage	20
BP	signaling	270
BP	single strand break repair	4
BP	sister chromatid cohesion	77
BP	sister chromatid segregation	56
BP	small GTPase mediated signal transduction	104
BP	snRNA 3'-end processing	10
BP	snRNA metabolic process	7
BP	snRNA modification	2
BP	snRNA processing	15
BP	snRNA pseudouridine synthesis	1
BP	snRNA transcription	2
BP	snoRNA localization	2
BP	snoRNA splicing	2
BP	sodium ion transmembrane transport	12
BP	sodium ion transport	12
BP	spermidine biosynthetic process	3
BP	spermidine metabolic process	1
BP	spermine biosynthetic process	2
BP	spermine transmembrane transport	2
BP	spermine transport	2
BP	sphingolipid biosynthetic process	63
BP	sphingolipid mediated signaling pathway	1
BP	sphingolipid metabolic process	91
BP	spindle assembly	18
BP	spindle localization	6
BP	spindle organization	35
BP	spliceosomal complex assembly	42
BP	spliceosomal complex disassembly	8
BP	spliceosomal snRNP assembly	10
BP	spliceosomal tri-snRNP complex assembly	16
BP	spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)	2
BP	stabilization of membrane potential	3
BP	steroid biosynthetic process	77
BP	steroid metabolic process	98
BP	sterol biosynthetic process	55
BP	sterol metabolic process	42
BP	sterol transport	36
BP	strand invasion	2
BP	stress granule assembly	18
BP	stress-activated MAPK cascade	8
BP	stress-activated protein kinase signaling cascade	18
BP	succinate metabolic process	4
BP	succinyl-CoA metabolic process	4
BP	sucrose metabolic process	2
BP	sulfate assimilation	3
BP	sulfate transmembrane transport	6
BP	sulfate transport	15
BP	sulfur amino acid biosynthetic process	10
BP	sulfur compound metabolic process	180
BP	superoxide metabolic process	18
BP	supramolecular fiber organization	119
BP	synaptonemal complex assembly	18
BP	synaptonemal complex organization	3
BP	system development	3
BP	tRNA 3'-end processing	8
BP	tRNA 3'-trailer cleavage	1
BP	tRNA C5-cytosine methylation	1
BP	tRNA N1-guanine methylation	2
BP	tRNA aminoacylation	46
BP	tRNA aminoacylation for mitochondrial protein translation	6
BP	tRNA aminoacylation for protein translation	63
BP	tRNA catabolic process	10
BP	tRNA dihydrouridine synthesis	3
BP	tRNA export from nucleus	12
BP	tRNA metabolic process	61
BP	tRNA methylation	40
BP	tRNA modification	80
BP	tRNA processing	162
BP	tRNA pseudouridine synthesis	6
BP	tRNA splicing, via endonucleolytic cleavage and ligation	12
BP	tRNA thio-modification	6
BP	tRNA threonylcarbamoyladenosine metabolic process	2
BP	tRNA threonylcarbamoyladenosine modification	3
BP	tRNA transcription	7
BP	tRNA transcription by RNA polymerase III	14
BP	tRNA transport	4
BP	tRNA wobble base cytosine methylation	1
BP	tRNA wobble cytosine modification	1
BP	tRNA wobble position uridine thiolation	2
BP	tRNA wobble uridine modification	30
BP	telomere capping	21
BP	telomere localization	2
BP	telomere maintenance	128
BP	telomere maintenance via recombination	30
BP	telomere maintenance via telomerase	18
BP	telomere maintenance via telomere lengthening	9
BP	telomere organization	16
BP	telomeric 3' overhang formation	4
BP	termination of RNA polymerase II transcription	15
BP	tetrahydrofolate biosynthetic process	3
BP	tetrahydrofolate metabolic process	3
BP	tetrahydrofolylpolyglutamate biosynthetic process	3
BP	tetrahydrofolylpolyglutamate metabolic process	1
BP	tetrapyrrole metabolic process	8
BP	thiamine diphosphate biosynthetic process	2
BP	thiamine diphosphate metabolic process	2
BP	thiamine metabolic process	3
BP	thiamine-containing compound metabolic process	2
BP	thiosulfate transport	1
BP	threonine catabolic process	4
BP	threonine metabolic process	6
BP	threonyl-tRNA aminoacylation	6
BP	tissue development	5
BP	tissue morphogenesis	1
BP	toxin biosynthetic process	2
BP	toxin metabolic process	6
BP	transcription by RNA polymerase I	56
BP	transcription by RNA polymerase II	468
BP	transcription by RNA polymerase III	66
BP	transcription elongation from RNA polymerase I promoter	8
BP	transcription elongation from RNA polymerase II promoter	90
BP	transcription initiation from RNA polymerase II promoter	88
BP	transcription initiation from RNA polymerase III promoter	9
BP	transcription preinitiation complex assembly	8
BP	transcription, DNA-templated	511
BP	transcription-coupled nucleotide-excision repair	20
BP	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	4
BP	transcriptional start site selection at RNA polymerase II promoter	4
BP	translation	1040
BP	translation reinitiation	2
BP	translational elongation	50
BP	translational initiation	91
BP	translational termination	36
BP	translesion synthesis	20
BP	transmembrane transport	812
BP	transport	293
BP	transport along microtubule	4
BP	transposition, RNA-mediated	2
BP	transsulfuration	4
BP	traversing start control point of mitotic cell cycle	12
BP	trehalose catabolic process	2
BP	trehalose metabolic process	6
BP	trehalose metabolism in response to stress	3
BP	tricarboxylic acid cycle	65
BP	tricarboxylic acid metabolic process	28
BP	tricarboxylic acid transmembrane transport	2
BP	triglyceride catabolic process	6
BP	triglyceride metabolic process	14
BP	tripeptide import across plasma membrane	2
BP	tryptophan catabolic process	8
BP	tryptophan catabolic process to kynurenine	4
BP	tryptophan metabolic process	8
BP	tryptophanyl-tRNA aminoacylation	2
BP	tube development	2
BP	tube morphogenesis	1
BP	tubulin complex assembly	16
BP	tyrosine catabolic process	4
BP	tyrosine metabolic process	9
BP	tyrosyl-tRNA aminoacylation	1
BP	ubiquinone biosynthetic process	49
BP	ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	1
BP	ubiquinone metabolic process	14
BP	ubiquinone-6 biosynthetic process	2
BP	ubiquitin recycling	6
BP	ubiquitin-dependent ERAD pathway	207
BP	ubiquitin-dependent endocytosis	3
BP	ubiquitin-dependent glycoprotein ERAD pathway	10
BP	ubiquitin-dependent protein catabolic process	477
BP	ubiquitin-dependent protein catabolic process via the N-end rule pathway	1
BP	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	28
BP	ultradian rhythm	4
BP	uracil metabolic process	1
BP	urea cycle	30
BP	urea metabolic process	5
BP	uridine catabolic process	2
BP	uridine metabolic process	2
BP	uroporphyrinogen III biosynthetic process	2
BP	vacuolar acidification	60
BP	vacuolar protein processing	3
BP	vacuolar proton-transporting V-type ATPase complex assembly	10
BP	vacuolar transmembrane transport	1
BP	vacuolar transport	48
BP	vacuole fusion, non-autophagic	10
BP	vacuole organization	60
BP	valine biosynthetic process	4
BP	valine catabolic process	4
BP	valine metabolic process	5
BP	valyl-tRNA aminoacylation	2
BP	very long-chain fatty acid biosynthetic process	4
BP	very long-chain fatty acid metabolic process	12
BP	very-low-density lipoprotein particle assembly	45
BP	vesicle budding from membrane	25
BP	vesicle docking	40
BP	vesicle docking involved in exocytosis	15
BP	vesicle fusion	54
BP	vesicle fusion with Golgi apparatus	6
BP	vesicle localization	16
BP	vesicle organization	133
BP	vesicle targeting	32
BP	vesicle targeting, to, from or within Golgi	1
BP	vesicle tethering involved in exocytosis	4
BP	vesicle-mediated transport	658
BP	viral entry into host cell	6
BP	viral life cycle	2
BP	viral process	3
BP	vitamin metabolic process	13
BP	vitamin transmembrane transport	2
BP	vitamin transport	10
BP	water homeostasis	5
BP	water transport	7
BP	wybutosine biosynthetic process	4
BP	xenobiotic detoxification by transmembrane export across the plasma membrane	12
BP	xenobiotic export	20
BP	xenobiotic transmembrane transport	76
BP	xenobiotic transport	15
BP	xylulose catabolic process	1
BP	xylulose metabolic process	2
BP	zinc ion homeostasis	8
BP	zinc ion transmembrane transport	18
BP	zinc ion transport	18
CC	6-phosphofructokinase complex	4
CC	90S preribosome	105
CC	AP-1 adaptor complex	4
CC	AP-2 adaptor complex	12
CC	AP-3 adaptor complex	3
CC	AP-type membrane coat adaptor complex	16
CC	ASTRA complex	2
CC	ATPase complex	19
CC	Arp2/3 protein complex	8
CC	Atg1/ULK1 kinase complex	3
CC	BLOC-1 complex	2
CC	CCAAT-binding factor complex	2
CC	CCR4-NOT complex	6
CC	CCR4-NOT core complex	2
CC	CHRAC	3
CC	CMG complex	1
CC	COPI vesicle coat	15
CC	COPI-coated vesicle	12
CC	COPI-coated vesicle membrane	6
CC	COPII vesicle coat	12
CC	COPII-coated ER to Golgi transport vesicle	28
CC	CORVET complex	6
CC	CURI complex	1
CC	Cajal body	18
CC	Cdc73/Paf1 complex	4
CC	Ctf18 RFC-like complex	4
CC	Cul3-RING ubiquitin ligase complex	12
CC	DNA polymerase complex	2
CC	DNA repair complex	16
CC	DNA replication factor C complex	6
CC	DNA replication preinitiation complex	3
CC	Dsl1/NZR complex	2
CC	EKC/KEOPS complex	2
CC	EMC complex	2
CC	ER to Golgi transport vesicle membrane	15
CC	ER ubiquitin ligase complex	2
CC	ERCC4-ERCC1 complex	3
CC	ESCRT I complex	6
CC	ESCRT III complex	4
CC	ESCRT-0 complex	3
CC	Elg1 RFC-like complex	2
CC	F-actin capping protein complex	3
CC	FACT complex	1
CC	GARP complex	2
CC	GATOR1 complex	2
CC	GET complex	6
CC	GPI-anchor transamidase complex	4
CC	Golgi apparatus	495
CC	Golgi cis cisterna	4
CC	Golgi cisterna	28
CC	Golgi cisterna membrane	4
CC	Golgi lumen	4
CC	Golgi medial cisterna	6
CC	Golgi membrane	144
CC	Golgi stack	40
CC	Golgi trans cisterna	6
CC	Golgi transport complex	12
CC	Golgi-associated vesicle	55
CC	Golgi-associated vesicle membrane	28
CC	H4 histone acetyltransferase complex	7
CC	HIR complex	2
CC	HOPS complex	4
CC	HULC complex	4
CC	Hrd1p ubiquitin ligase ERAD-L complex	6
CC	Hrd1p ubiquitin ligase complex	6
CC	I band	6
CC	Ino80 complex	8
CC	Ku70:Ku80 complex	3
CC	MICOS complex	3
CC	MIS12/MIND type complex	2
CC	MWP complex	1
CC	Mis6-Sim4 complex	1
CC	Mon1-Ccz1 complex	3
CC	Mpp10 complex	4
CC	Mre11 complex	4
CC	MutLalpha complex	1
CC	MutSalpha complex	2
CC	MutSbeta complex	2
CC	NADH dehydrogenase complex	3
CC	NatA complex	2
CC	NatC complex	2
CC	Ndc80 complex	2
CC	Noc1p-Noc2p complex	1
CC	Noc2p-Noc3p complex	1
CC	Noc4p-Nop14p complex	2
CC	NuA3a histone acetyltransferase complex	1
CC	NuA3b histone acetyltransferase complex	1
CC	NuA4 histone acetyltransferase complex	10
CC	P-body	40
CC	PAM complex, Tim23 associated import motor	9
CC	PAN complex	2
CC	PAS complex	1
CC	PTW/PP1 phosphatase complex	4
CC	PeBoW complex	4
CC	Prp19 complex	6
CC	Pwp2p-containing subcomplex of 90S preribosome	2
CC	R2TP complex	2
CC	RISC complex	6
CC	RNA cap binding complex	2
CC	RNA polymerase I complex	6
CC	RNA polymerase I transcription regulator complex	2
CC	RNA polymerase II transcription regulator complex	105
CC	RNA polymerase II, core complex	9
CC	RNA polymerase II, holoenzyme	32
CC	RNA polymerase III complex	18
CC	RQC complex	4
CC	RSC-type complex	3
CC	Rad17 RFC-like complex	1
CC	Rad6-Rad18 complex	1
CC	RecQ family helicase-topoisomerase III complex	1
CC	Ric1-Rgp1 guanyl-nucleotide exchange factor complex	2
CC	Rix1 complex	1
CC	SAGA complex	16
CC	SAGA-type complex	8
CC	SAM complex	3
CC	SCF ubiquitin ligase complex	25
CC	SLIK (SAGA-like) complex	3
CC	SNARE complex	30
CC	SPOTS complex	2
CC	SUMO activating enzyme complex	2
CC	SWI/SNF complex	10
CC	Seh1-associated complex	3
CC	Set1C/COMPASS complex	12
CC	Sin3-type complex	2
CC	Ski complex	2
CC	Sm-like protein family complex	13
CC	Swr1 complex	12
CC	THO complex	1
CC	THO complex part of transcription export complex	2
CC	TIM22 mitochondrial import inner membrane insertion complex	4
CC	TIM23 mitochondrial import inner membrane translocase complex	20
CC	TORC1 complex	6
CC	TORC2 complex	9
CC	TRAPP complex	6
CC	TRAPPII protein complex	2
CC	TRAPPIII protein complex	1
CC	TSC1-TSC2 complex	2
CC	U1 snRNP	12
CC	U2 snRNP	6
CC	U2-type catalytic step 1 spliceosome	4
CC	U2-type post-mRNA release spliceosomal complex	2
CC	U2-type post-spliceosomal complex	1
CC	U2-type prespliceosome	21
CC	U2-type spliceosomal complex	42
CC	U4 snRNP	6
CC	U4/U6 x U5 tri-snRNP complex	18
CC	U5 snRNP	25
CC	UTP-C complex	3
CC	VCP-NPL4-UFD1 AAA ATPase complex	4
CC	WASH complex	3
CC	Z disc	7
CC	acetolactate synthase complex	2
CC	actin cytoskeleton	168
CC	actin filament	24
CC	actin filament bundle	10
CC	activating signal cointegrator 1 complex	1
CC	actomyosin contractile ring	14
CC	alpha DNA polymerase:primase complex	3
CC	aminoacyl-tRNA synthetase multienzyme complex	4
CC	anaphase-promoting complex	8
CC	anchored component of external side of plasma membrane	36
CC	anchored component of membrane	40
CC	anchored component of plasma membrane	60
CC	anchored component of the cytoplasmic side of the plasma membrane	3
CC	astral microtubule	4
CC	autophagosome	12
CC	autophagosome membrane	5
CC	box C/D RNP complex	12
CC	box H/ACA RNP complex	1
CC	box H/ACA snoRNP complex	4
CC	catalytic complex	537
CC	catalytic step 2 spliceosome	6
CC	cell cortex	235
CC	cell cortex region	18
CC	cell division site	30
CC	cell leading edge	4
CC	cell periphery	1236
CC	cell projection	128
CC	cell projection membrane	5
CC	cell surface	410
CC	cell tip	46
CC	cellular_component	1189
CC	centrosome	21
CC	chaperone complex	12
CC	chaperonin-containing T-complex	9
CC	checkpoint clamp complex	1
CC	chromatin	1100
CC	chromatin silencing complex	5
CC	chromosome	798
CC	chromosome, centromeric core domain	2
CC	chromosome, centromeric region	120
CC	chromosome, telomeric region	96
CC	cis-Golgi network	42
CC	cis-Golgi network membrane	3
CC	clathrin adaptor complex	6
CC	clathrin coat	15
CC	clathrin coat of coated pit	8
CC	clathrin coat of endocytic vesicle	2
CC	clathrin coat of trans-Golgi network vesicle	3
CC	clathrin vesicle coat	6
CC	clathrin-coated endocytic vesicle	12
CC	clathrin-coated endocytic vesicle membrane	4
CC	clathrin-coated pit	12
CC	clathrin-coated vesicle	36
CC	clathrin-coated vesicle membrane	6
CC	coated vesicle	39
CC	coated vesicle membrane	9
CC	cohesin complex	10
CC	commitment complex	6
CC	condensed chromosome	64
CC	condensed chromosome, centromeric region	32
CC	condensed nuclear chromosome	80
CC	condensin complex	12
CC	contractile fiber	3
CC	contractile ring	14
CC	core mediator complex	3
CC	cortical actin cytoskeleton	114
CC	cortical cytoskeleton	100
CC	cortical endoplasmic reticulum	18
CC	cortical microtubule	1
CC	cortical microtubule cytoskeleton	1
CC	cullin-RING ubiquitin ligase complex	27
CC	cyclin A2-CDK2 complex	4
CC	cyclin-dependent protein kinase holoenzyme complex	24
CC	cyclin/CDK positive transcription elongation factor complex	4
CC	cytochrome complex	9
CC	cytoplasm	11592
CC	cytoplasmic exosome (RNase complex)	18
CC	cytoplasmic microtubule	30
CC	cytoplasmic region	47
CC	cytoplasmic ribonucleoprotein granule	78
CC	cytoplasmic side of membrane	24
CC	cytoplasmic side of mitochondrial outer membrane	2
CC	cytoplasmic side of plasma membrane	60
CC	cytoplasmic stress granule	180
CC	cytoplasmic ubiquitin ligase complex	4
CC	cytoplasmic vesicle	360
CC	cytoplasmic vesicle membrane	45
CC	cytoskeleton	357
CC	cytosol	2475
CC	cytosolic large ribosomal subunit	108
CC	cytosolic proteasome complex	18
CC	cytosolic ribosome	120
CC	cytosolic small ribosomal subunit	85
CC	cytosolic tRNA wobble base thiouridylase complex	1
CC	dehydrodolichyl diphosphate synthase complex	2
CC	delta DNA polymerase complex	2
CC	early endosome	28
CC	elongin complex	2
CC	endocytic vesicle	15
CC	endocytic vesicle membrane	4
CC	endomembrane system	904
CC	endoplasmic reticulum	1573
CC	endoplasmic reticulum exit site	5
CC	endoplasmic reticulum lumen	66
CC	endoplasmic reticulum membrane	456
CC	endoplasmic reticulum tubular network	24
CC	endoplasmic reticulum-Golgi intermediate compartment	60
CC	endosome	304
CC	endosome membrane	56
CC	epsilon DNA polymerase complex	3
CC	eukaryotic 43S preinitiation complex	12
CC	eukaryotic 48S preinitiation complex	4
CC	eukaryotic translation elongation factor 1 complex	6
CC	eukaryotic translation initiation factor 2B complex	6
CC	eukaryotic translation initiation factor 3 complex	8
CC	eukaryotic translation initiation factor 3 complex, eIF3e	2
CC	eukaryotic translation initiation factor 3 complex, eIF3m	2
CC	eukaryotic translation initiation factor 4F complex	4
CC	exocyst	20
CC	exosome (RNase complex)	24
CC	external side of plasma membrane	135
CC	extracellular matrix	90
CC	extracellular region	657
CC	extracellular space	18
CC	extrinsic component of cytoplasmic side of plasma membrane	12
CC	extrinsic component of membrane	132
CC	extrinsic component of mitochondrial inner membrane	15
CC	extrinsic component of mitochondrial outer membrane	1
CC	extrinsic component of organelle membrane	21
CC	extrinsic component of plasma membrane	24
CC	extrinsic component of vacuolar membrane	3
CC	glutamyl-tRNA(Gln) amidotransferase complex	4
CC	glycine cleavage complex	2
CC	growing cell tip	3
CC	guanyl-nucleotide exchange factor complex	16
CC	heterochromatin	84
CC	histone H3-K14 acetyltransferase complex	1
CC	histone acetyltransferase complex	22
CC	histone deacetylase complex	40
CC	histone methyltransferase complex	20
CC	inner kinetochore	1
CC	inner mitochondrial membrane protein complex	24
CC	integral component of Golgi membrane	16
CC	integral component of endoplasmic reticulum membrane	112
CC	integral component of membrane	1860
CC	integral component of mitochondrial inner membrane	60
CC	integral component of mitochondrial membrane	68
CC	integral component of mitochondrial outer membrane	25
CC	integral component of organelle membrane	96
CC	integral component of peroxisomal membrane	21
CC	integral component of plasma membrane	240
CC	intracellular anatomical structure	2298
CC	intracellular membrane-bounded organelle	6468
CC	intracellular organelle	2032
CC	intracellular vesicle	240
CC	intrinsic component of Golgi membrane	4
CC	intrinsic component of endoplasmic reticulum membrane	48
CC	intrinsic component of external side of plasma membrane	12
CC	intrinsic component of membrane	1182
CC	intrinsic component of mitochondrial inner membrane	24
CC	intrinsic component of mitochondrial outer membrane	10
CC	intrinsic component of organelle membrane	24
CC	intrinsic component of peroxisomal membrane	3
CC	intrinsic component of plasma membrane	148
CC	intrinsic component of the cytoplasmic side of the plasma membrane	18
CC	kinesin complex	16
CC	kinetochore	63
CC	kinetochore microtubule	6
CC	large ribosomal subunit	81
CC	late endosome	84
CC	late endosome membrane	10
CC	lateral cell cortex	2
CC	leading edge membrane	3
CC	lipid droplet	105
CC	lysosomal membrane	9
CC	lysosome	16
CC	lytic vacuole	106
CC	m-AAA complex	1
CC	mRNA cap binding complex	3
CC	mRNA cleavage and polyadenylation specificity factor complex	9
CC	mRNA cleavage factor complex	16
CC	mannosyltransferase complex	6
CC	mediator complex	15
CC	meiotic spindle	8
CC	meiotic spindle pole	2
CC	membrane	3420
CC	membrane coat	40
CC	membrane microdomain	12
CC	membrane protein complex	158
CC	membrane raft	48
CC	membrane-bounded organelle	936
CC	methyltransferase complex	4
CC	microtubule	49
CC	microtubule associated complex	32
CC	microtubule cytoskeleton	175
CC	microtubule end	2
CC	microtubule organizing center	126
CC	microtubule plus-end	5
CC	midbody	6
CC	mismatch repair complex	2
CC	mitochondria-associated endoplasmic reticulum membrane	3
CC	mitochondrial DNA-directed RNA polymerase complex	1
CC	mitochondrial alpha-ketoglutarate dehydrogenase complex	15
CC	mitochondrial crista	4
CC	mitochondrial crista junction	2
CC	mitochondrial degradosome	2
CC	mitochondrial envelope	396
CC	mitochondrial inner membrane	528
CC	mitochondrial intermembrane space	40
CC	mitochondrial large ribosomal subunit	32
CC	mitochondrial matrix	406
CC	mitochondrial membrane	558
CC	mitochondrial nucleoid	64
CC	mitochondrial outer membrane	189
CC	mitochondrial outer membrane translocase complex	12
CC	mitochondrial oxoglutarate dehydrogenase complex	3
CC	mitochondrial proton-transporting ATP synthase complex	30
CC	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	8
CC	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	8
CC	mitochondrial proton-transporting ATP synthase, catalytic core	2
CC	mitochondrial proton-transporting ATP synthase, stator stalk	1
CC	mitochondrial pyruvate dehydrogenase complex	16
CC	mitochondrial respirasome	35
CC	mitochondrial respiratory chain complex I	15
CC	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3
CC	mitochondrial respiratory chain complex III	12
CC	mitochondrial respiratory chain complex IV	5
CC	mitochondrial ribosome	72
CC	mitochondrial small ribosomal subunit	21
CC	mitochondrion	3150
CC	mitotic cohesin complex	2
CC	mitotic spindle	15
CC	mitotic spindle midzone	4
CC	multi-eIF complex	2
CC	multivesicular body	18
CC	myofibril	5
CC	nascent polypeptide-associated complex	2
CC	nuclear MIS12/MIND complex	1
CC	nuclear RNA export factor complex	2
CC	nuclear body	30
CC	nuclear chromosome	854
CC	nuclear cyclin-dependent protein kinase holoenzyme complex	4
CC	nuclear envelope	273
CC	nuclear envelope lumen	3
CC	nuclear exosome (RNase complex)	20
CC	nuclear inner membrane	24
CC	nuclear lumen	510
CC	nuclear matrix	5
CC	nuclear membrane	96
CC	nuclear microtubule	1
CC	nuclear mitotic cohesin complex	2
CC	nuclear origin of replication recognition complex	10
CC	nuclear outer membrane-endoplasmic reticulum membrane network	61
CC	nuclear periphery	63
CC	nuclear pore	80
CC	nuclear pore central transport channel	3
CC	nuclear pore cytoplasmic filaments	9
CC	nuclear pore inner ring	2
CC	nuclear pore nuclear basket	4
CC	nuclear pore outer ring	6
CC	nuclear pore transmembrane ring	1
CC	nuclear pre-replicative complex	3
CC	nuclear proteasome complex	1
CC	nuclear replication fork	72
CC	nuclear ubiquitin ligase complex	4
CC	nucleoid	16
CC	nucleolus	736
CC	nucleoplasm	600
CC	nucleosome	54
CC	nucleotide-activated protein kinase complex	4
CC	nucleotide-excision repair complex	12
CC	nucleotide-excision repair factor 1 complex	4
CC	nucleotide-excision repair factor 2 complex	1
CC	nucleotide-excision repair factor 3 complex	1
CC	nucleus	5832
CC	nucleus-vacuole junction	5
CC	oligosaccharyltransferase complex	10
CC	organelle inner membrane	70
CC	organelle membrane	567
CC	organelle membrane contact site	14
CC	origin recognition complex	2
CC	outer kinetochore	3
CC	outer membrane	54
CC	outer mitochondrial membrane protein complex	4
CC	oxidoreductase complex	52
CC	oxoglutarate dehydrogenase complex	6
CC	palmitoyltransferase complex	2
CC	peptidase complex	21
CC	pericentric heterochromatin	45
CC	perinuclear region of cytoplasm	7
CC	peroxisomal importomer complex	2
CC	peroxisomal matrix	36
CC	peroxisomal membrane	42
CC	peroxisome	175
CC	phagocytic vesicle	5
CC	phagophore assembly site	48
CC	phagophore assembly site membrane	10
CC	phenylalanine-tRNA ligase complex	2
CC	phosphatidylinositol 3-kinase complex	12
CC	phosphatidylinositol 3-kinase complex, class III	6
CC	phosphatidylinositol 3-kinase complex, class III, type I	2
CC	phosphatidylinositol 3-kinase complex, class III, type II	2
CC	phospholipid-translocating ATPase complex	2
CC	phosphopantothenoylcysteine decarboxylase complex	1
CC	plasma membrane	1551
CC	plasma membrane bounded cell projection	32
CC	plasma membrane protein complex	30
CC	polysome	48
CC	post-mRNA release spliceosomal complex	14
CC	post-spliceosomal complex	1
CC	precatalytic spliceosome	2
CC	prefoldin complex	4
CC	preribosome	66
CC	preribosome, large subunit precursor	48
CC	preribosome, small subunit precursor	24
CC	procollagen-proline 4-dioxygenase complex	18
CC	proteasome accessory complex	8
CC	proteasome complex	70
CC	proteasome core complex	24
CC	proteasome core complex, alpha-subunit complex	8
CC	proteasome core complex, beta-subunit complex	8
CC	proteasome regulatory particle	16
CC	proteasome regulatory particle, base subcomplex	2
CC	proteasome regulatory particle, lid subcomplex	3
CC	proteasome storage granule	8
CC	protein farnesyltransferase complex	2
CC	protein kinase CK2 complex	6
CC	protein kinase complex	11
CC	protein phosphatase type 1 complex	10
CC	protein phosphatase type 2A complex	5
CC	protein serine/threonine phosphatase complex	8
CC	protein-DNA complex	76
CC	protein-containing complex	4923
CC	proton-transporting ATP synthase complex	12
CC	proton-transporting ATP synthase complex, catalytic core F(1)	2
CC	proton-transporting ATP synthase complex, coupling factor F(o)	8
CC	proton-transporting V-type ATPase complex	16
CC	proton-transporting V-type ATPase, V0 domain	3
CC	proton-transporting V-type ATPase, V1 domain	5
CC	proton-transporting two-sector ATPase complex	14
CC	proton-transporting two-sector ATPase complex, catalytic domain	7
CC	pyruvate dehydrogenase complex	12
CC	rDNA heterochromatin	12
CC	recycling endosome	7
CC	replication fork	100
CC	replication fork protection complex	13
CC	replisome	8
CC	respirasome	7
CC	respiratory chain complex I	3
CC	respiratory chain complex IV	3
CC	retromer complex	6
CC	retromer, cargo-selective complex	2
CC	ribonuclease MRP complex	3
CC	ribonucleoprotein complex	1408
CC	ribonucleoprotein granule	156
CC	ribose phosphate diphosphokinase complex	1
CC	ribosome	354
CC	rough endoplasmic reticulum	5
CC	rough endoplasmic reticulum membrane	3
CC	ruffle	7
CC	ruffle membrane	5
CC	sarcomere	7
CC	septin collar	2
CC	septin complex	8
CC	septin cytoskeleton	8
CC	septin ring	8
CC	serine C-palmitoyltransferase complex	2
CC	serine/threonine protein kinase complex	10
CC	signal peptidase complex	2
CC	signal recognition particle	2
CC	signal recognition particle receptor complex	3
CC	signal recognition particle, endoplasmic reticulum targeting	8
CC	site of DNA damage	44
CC	site of double-strand break	66
CC	site of polarized growth	56
CC	small nuclear ribonucleoprotein complex	52
CC	small ribosomal subunit	120
CC	small-subunit processome	84
CC	sno(s)RNA-containing ribonucleoprotein complex	40
CC	spindle	48
CC	spindle microtubule	15
CC	spindle midzone	4
CC	spindle pole	15
CC	spliceosomal complex	216
CC	spliceosomal snRNP complex	11
CC	spliceosomal tri-snRNP complex	6
CC	storage vacuole	106
CC	succinate-CoA ligase complex	1
CC	supramolecular fiber	10
CC	t-UTP complex	2
CC	telomerase holoenzyme complex	6
CC	trans-Golgi network	78
CC	trans-Golgi network membrane	6
CC	trans-Golgi network transport vesicle	14
CC	trans-Golgi network transport vesicle membrane	3
CC	transcription elongation factor complex	45
CC	transcription export complex	3
CC	transcription factor AP-1 complex	2
CC	transcription factor TFIID complex	15
CC	transcription factor TFIIE complex	1
CC	transcription factor TFIIF complex	1
CC	transcription factor TFIIH core complex	3
CC	transcription factor TFIIH holo complex	8
CC	transcription factor TFIIIB complex	3
CC	transcription factor TFIIIC complex	4
CC	transcription factor TFIIK complex	2
CC	transcription preinitiation complex	2
CC	transcription regulator complex	180
CC	transcription repressor complex	5
CC	transcriptionally active chromatin	15
CC	transferase complex	282
CC	translation release factor complex	1
CC	transmembrane transporter complex	3
CC	transport vesicle	42
CC	transport vesicle membrane	16
CC	tricarboxylic acid cycle enzyme complex	5
CC	tubulin complex	1
CC	ubiquitin conjugating enzyme complex	6
CC	ubiquitin ligase complex	128
CC	vacuolar membrane	165
CC	vacuolar proton-transporting V-type ATPase complex	24
CC	vacuolar proton-transporting V-type ATPase, V0 domain	3
CC	vacuolar proton-transporting V-type ATPase, V1 domain	15
CC	vacuole	545
CC	vesicle	360
CC	vesicle coat	9
CC	vesicle membrane	54
CC	vesicle tethering complex	14
MF	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity	1
MF	1-acylglycerol-3-phosphate O-acyltransferase activity	7
MF	1-acylglycerophosphocholine O-acyltransferase activity	6
MF	1-phosphatidylinositol 4-kinase activity	8
MF	1-phosphatidylinositol binding	5
MF	1-phosphatidylinositol-3-kinase activity	5
MF	1-pyrroline-5-carboxylate dehydrogenase activity	1
MF	18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity	1
MF	2 iron, 2 sulfur cluster binding	20
MF	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity	1
MF	2-aminoadipate transaminase activity	2
MF	2-oxoglutarate-dependent dioxygenase activity	55
MF	3' overhang single-stranded DNA endodeoxyribonuclease activity	2
MF	3'-5' DNA helicase activity	15
MF	3'-5' exonuclease activity	32
MF	3'-5'-exodeoxyribonuclease activity	4
MF	3'-5'-exoribonuclease activity	35
MF	3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	3
MF	3'-tyrosyl-DNA phosphodiesterase activity	2
MF	3-chloroallyl aldehyde dehydrogenase activity	2
MF	3-dehydrosphinganine reductase activity	4
MF	3-hydroxyacyl-CoA dehydrogenase activity	10
MF	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	2
MF	3-oxoacyl-[acyl-carrier-protein] synthase activity	3
MF	3-phosphoinositide-dependent protein kinase activity	1
MF	4 iron, 4 sulfur cluster binding	10
MF	4-aminobutyrate transaminase activity	1
MF	4-hydroxybenzoate octaprenyltransferase activity	1
MF	5'-3' DNA helicase activity	8
MF	5'-3' RNA polymerase activity	12
MF	5'-3' exodeoxyribonuclease activity	4
MF	5'-3' exonuclease activity	8
MF	5'-flap endonuclease activity	4
MF	5'-nucleotidase activity	4
MF	5'-tyrosyl-DNA phosphodiesterase activity	3
MF	5-aminolevulinate synthase activity	2
MF	5S rRNA binding	4
MF	6-phosphofructokinase activity	10
MF	6-phosphogluconolactonase activity	8
MF	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity	2
MF	8-oxo-dGDP phosphatase activity	3
MF	ADP binding	6
MF	ADP transmembrane transporter activity	8
MF	AMP binding	10
MF	AMP-activated protein kinase activity	4
MF	ATP binding	464
MF	ATP hydrolysis activity	574
MF	ATP transmembrane transporter activity	10
MF	ATP-dependent activity, acting on DNA	78
MF	ATP-dependent activity, acting on RNA	40
MF	ATP-dependent peptidase activity	8
MF	ATP:ADP antiporter activity	8
MF	ATPase activator activity	30
MF	ATPase binding	5
MF	ATPase inhibitor activity	8
MF	ATPase regulator activity	18
MF	ATPase-coupled cation transmembrane transporter activity	77
MF	ATPase-coupled ion transmembrane transporter activity	24
MF	ATPase-coupled transmembrane transporter activity	95
MF	C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity	1
MF	CoA hydrolase activity	1
MF	CoA-ligase activity	6
MF	D-ribulokinase activity	1
MF	D-serine ammonia-lyase activity	1
MF	DNA N-glycosylase activity	8
MF	DNA binding	1020
MF	DNA binding, bending	6
MF	DNA clamp unloader activity	4
MF	DNA helicase activity	84
MF	DNA insertion or deletion binding	1
MF	DNA ligase (ATP) activity	2
MF	DNA ligase activity	3
MF	DNA primase activity	6
MF	DNA replication origin binding	45
MF	DNA secondary structure binding	4
MF	DNA topoisomerase binding	1
MF	DNA translocase activity	6
MF	DNA-(apurinic or apyrimidinic site) endonuclease activity	3
MF	DNA-binding transcription activator activity, RNA polymerase II-specific	96
MF	DNA-binding transcription factor activity	252
MF	DNA-binding transcription factor activity, RNA polymerase II-specific	153
MF	DNA-binding transcription repressor activity, RNA polymerase II-specific	32
MF	DNA-directed 5'-3' RNA polymerase activity	30
MF	DNA-directed DNA polymerase activity	30
MF	FAD binding	12
MF	FAD transmembrane transporter activity	6
MF	FFAT motif binding	3
MF	FK506 binding	10
MF	FMN adenylyltransferase activity	2
MF	FMN binding	15
MF	G-protein alpha-subunit binding	12
MF	G-quadruplex DNA binding	4
MF	GDP binding	6
MF	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	1
MF	GDP-dissociation inhibitor activity	6
MF	GMP synthase (glutamine-hydrolyzing) activity	2
MF	GMP synthase activity	2
MF	GPI-anchor transamidase activity	4
MF	GTP binding	210
MF	GTPase activator activity	108
MF	GTPase activity	216
MF	GTPase binding	69
MF	GTPase regulator activity	90
MF	H3 histone acetyltransferase activity	1
MF	H4 histone acetyltransferase activity	2
MF	Hsp70 protein binding	30
MF	Hsp90 protein binding	12
MF	IMP 5'-nucleotidase activity	2
MF	IMP dehydrogenase activity	2
MF	IgE binding	3
MF	L-amino acid transmembrane transporter activity	12
MF	L-isoleucine transaminase activity	1
MF	L-leucine transaminase activity	1
MF	L-malate dehydrogenase activity	8
MF	L-methionine transmembrane transporter activity	1
MF	L-proline transmembrane transporter activity	4
MF	L-serine ammonia-lyase activity	6
MF	L-threonine ammonia-lyase activity	2
MF	L-valine transaminase activity	1
MF	MAP kinase activity	5
MF	MAP kinase kinase kinase activity	8
MF	MAP kinase kinase kinase kinase activity	6
MF	MAP kinase phosphatase activity	8
MF	MAP kinase serine/threonine phosphatase activity	2
MF	MAP-kinase scaffold activity	6
MF	MCM complex binding	1
MF	N,N-dimethylaniline monooxygenase activity	4
MF	N-acetylglucosaminylphosphatidylinositol deacetylase activity	3
MF	N-acetyltransferase activity	42
MF	N-acylphosphatidylethanolamine-specific phospholipase D activity	4
MF	N-acyltransferase activity	18
MF	N-methyltransferase activity	32
MF	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	2
MF	NAD binding	10
MF	NAD(P)H oxidase H2O2-forming activity	5
MF	NAD+ diphosphatase activity	2
MF	NAD+ kinase activity	3
MF	NADH dehydrogenase (quinone) activity	2
MF	NADH dehydrogenase (ubiquinone) activity	8
MF	NADH dehydrogenase activity	20
MF	NADP binding	21
MF	NADPH-adrenodoxin reductase activity	1
MF	NEDD8 activating enzyme activity	4
MF	NEDD8-specific protease activity	3
MF	O-acyltransferase activity	20
MF	O-methyltransferase activity	18
MF	P-type calcium transporter activity	5
MF	P-type ion transporter activity	6
MF	RNA binding	1359
MF	RNA helicase activity	154
MF	RNA lariat debranching enzyme activator activity	1
MF	RNA lariat debranching enzyme activity	2
MF	RNA ligase (ATP) activity	3
MF	RNA methyltransferase activity	72
MF	RNA polymerase I core binding	3
MF	RNA polymerase I general transcription initiation factor activity	2
MF	RNA polymerase I general transcription initiation factor binding	1
MF	RNA polymerase II C-terminal domain binding	8
MF	RNA polymerase II C-terminal domain phosphoserine binding	4
MF	RNA polymerase II CTD heptapeptide repeat kinase activity	4
MF	RNA polymerase II CTD heptapeptide repeat phosphatase activity	3
MF	RNA polymerase II cis-regulatory region sequence-specific DNA binding	77
MF	RNA polymerase II complex binding	20
MF	RNA polymerase II core promoter sequence-specific DNA binding	4
MF	RNA polymerase II general transcription initiation factor binding	2
MF	RNA polymerase II transcription regulatory region sequence-specific DNA binding	84
MF	RNA polymerase III core binding	1
MF	RNA polymerase III general transcription initiation factor activity	5
MF	RNA polymerase III transcription regulatory region sequence-specific DNA binding	2
MF	RNA polymerase III type 1 promoter sequence-specific DNA binding	1
MF	RNA polymerase III type 3 promoter sequence-specific DNA binding	2
MF	RNA polymerase binding	30
MF	RNA polymerase core enzyme binding	12
MF	RNA stem-loop binding	5
MF	RNA strand annealing activity	4
MF	RNA-DNA hybrid ribonuclease activity	28
MF	S-adenosyl-L-methionine transmembrane transporter activity	3
MF	S-adenosylmethionine-dependent methyltransferase activity	68
MF	S-methyl-5-thioadenosine phosphorylase activity	2
MF	S-methyl-5-thioribose-1-phosphate isomerase activity	2
MF	SH3 domain binding	7
MF	SNAP receptor activity	20
MF	SNARE binding	32
MF	SUMO activating enzyme activity	3
MF	SUMO binding	10
MF	SUMO conjugating enzyme activity	2
MF	SUMO ligase activity	3
MF	SUMO transferase activity	12
MF	SUMO-specific endopeptidase activity	4
MF	SUMO-specific isopeptidase activity	5
MF	SUMO-specific protease activity	1
MF	TBP-class protein binding	30
MF	TFIID-class transcription factor complex binding	3
MF	TFIIIC-class transcription factor complex binding	4
MF	U1 snRNA binding	2
MF	U1 snRNP binding	1
MF	U2 snRNP binding	1
MF	U3 snoRNA binding	6
MF	U4 snRNA binding	3
MF	U5 snRNA binding	1
MF	U6 snRNA binding	4
MF	UDP-galactose transmembrane transporter activity	2
MF	UDP-glucose 4-epimerase activity	2
MF	UDP-glucose transmembrane transporter activity	1
MF	UDP-glucose:glycoprotein glucosyltransferase activity	4
MF	UDP-glucosyltransferase activity	18
MF	UDP-glycosyltransferase activity	18
MF	UTP:glucose-1-phosphate uridylyltransferase activity	3
MF	Y-form DNA binding	4
MF	[acyl-carrier-protein] S-malonyltransferase activity	4
MF	acetate-CoA ligase activity	10
MF	acetolactate synthase activity	1
MF	acetyl-CoA C-acyltransferase activity	6
MF	acetyl-CoA carboxylase activity	3
MF	acetyl-CoA:L-glutamate N-acetyltransferase activity	4
MF	acetyltransferase activator activity	2
MF	acetyltransferase activity	70
MF	acid phosphatase activity	4
MF	acid-amino acid ligase activity	2
MF	acid-thiol ligase activity	8
MF	aconitate hydratase activity	8
MF	actin binding	72
MF	actin filament binding	56
MF	actin monomer binding	14
MF	acyl binding	2
MF	acyl carrier activity	2
MF	acyl-CoA dehydrogenase activity	6
MF	acyl-CoA hydrolase activity	5
MF	acyl-CoA oxidase activity	3
MF	acylglycerol O-acyltransferase activity	2
MF	acylglycerol lipase activity	8
MF	acylglycerone-phosphate reductase activity	2
MF	acylpyruvate hydrolase activity	1
MF	acyltransferase activity	125
MF	acyltransferase activity, transferring groups other than amino-acyl groups	54
MF	adenine nucleotide transmembrane transporter activity	8
MF	adenosylhomocysteinase activity	2
MF	adenyl nucleotide binding	63
MF	adenyl-nucleotide exchange factor activity	4
MF	adenylate kinase activity	4
MF	adenylyltransferase activity	3
MF	alanine-glyoxylate transaminase activity	3
MF	alanine-tRNA ligase activity	5
MF	alcohol binding	6
MF	alcohol dehydrogenase (NAD+) activity	6
MF	alcohol dehydrogenase [NAD(P)+] activity	1
MF	aldehyde dehydrogenase (NAD+) activity	15
MF	aldose 1-epimerase activity	2
MF	alpha,alpha-trehalase activity	1
MF	alpha-1,2-mannosyltransferase activity	9
MF	alpha-ketoglutarate transmembrane transporter activity	3
MF	alpha-mannosidase activity	2
MF	alpha-tubulin binding	6
MF	amide binding	28
MF	amide transmembrane transporter activity	4
MF	amidophosphoribosyltransferase activity	1
MF	amine transmembrane transporter activity	2
MF	amino acid binding	8
MF	amino acid kinase activity	3
MF	amino acid transmembrane transporter activity	36
MF	aminoacyl-tRNA editing activity	3
MF	aminopeptidase activity	72
MF	ammonia-lyase activity	3
MF	ammonium transmembrane transporter activity	30
MF	anion channel activity	9
MF	anion transmembrane transporter activity	68
MF	anion:anion antiporter activity	18
MF	antioxidant activity	60
MF	antiporter activity	77
MF	aralkylamine N-acetyltransferase activity	3
MF	arginine binding	6
MF	argininosuccinate lyase activity	1
MF	argininosuccinate synthase activity	2
MF	arginyltransferase activity	2
MF	arylsulfatase activity	4
MF	asparagine synthase (glutamine-hydrolyzing) activity	3
MF	asparagine-tRNA ligase activity	8
MF	aspartate carbamoyltransferase activity	2
MF	aspartate-tRNA ligase activity	2
MF	aspartic-type endopeptidase activity	48
MF	aspartic-type peptidase activity	8
MF	azole transmembrane transporter activity	6
MF	basal RNA polymerase II transcription machinery binding	10
MF	beta-glucosidase activity	6
MF	beta-tubulin binding	10
MF	bicarbonate transmembrane transporter activity	5
MF	bilirubin transmembrane transporter activity	2
MF	biotin carboxylase activity	1
MF	biotin-[acetyl-CoA-carboxylase] ligase activity	1
MF	biotin-protein ligase activity	3
MF	box H/ACA snoRNA binding	3
MF	branched-chain-amino-acid transaminase activity	1
MF	cadmium ion transmembrane transporter activity	4
MF	calcium channel activity	21
MF	calcium ion binding	80
MF	calcium ion transmembrane transporter activity	24
MF	calcium:cation antiporter activity	2
MF	calcium:proton antiporter activity	2
MF	calmodulin binding	9
MF	carbamoyl-phosphate synthase (ammonia) activity	4
MF	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	4
MF	carbohydrate binding	21
MF	carbohydrate derivative binding	291
MF	carbohydrate kinase activity	10
MF	carbon-carbon lyase activity	18
MF	carbon-sulfur lyase activity	6
MF	carbonate dehydratase activity	3
MF	carbonyl reductase (NADPH) activity	3
MF	carboxy-lyase activity	32
MF	carboxylic acid binding	4
MF	carboxylic acid transmembrane transporter activity	54
MF	carboxylic ester hydrolase activity	55
MF	carboxypeptidase activity	30
MF	cargo receptor activity	6
MF	carnitine O-acetyltransferase activity	3
MF	carnitine transmembrane transporter activity	4
MF	catalytic activity	2428
MF	cation binding	84
MF	cation channel activity	28
MF	cation transmembrane transporter activity	168
MF	cation:cation antiporter activity	8
MF	cell adhesion molecule binding	80
MF	centromeric DNA binding	8
MF	channel activity	45
MF	channel regulator activity	3
MF	chaperone binding	24
MF	chitin binding	8
MF	chitinase activity	8
MF	chloride channel activity	18
MF	chloride transmembrane transporter activity	15
MF	cholesterol binding	20
MF	choline kinase activity	2
MF	chromatin DNA binding	20
MF	chromatin binding	252
MF	cis-regulatory region sequence-specific DNA binding	84
MF	cis-trans isomerase activity	4
MF	citrate (Si)-synthase activity	2
MF	citrate transmembrane transporter activity	5
MF	clathrin adaptor activity	6
MF	clathrin binding	10
MF	cohesin loading activity	1
MF	copper ion binding	7
MF	core promoter sequence-specific DNA binding	8
MF	cyclic-nucleotide phosphodiesterase activity	1
MF	cyclin binding	10
MF	cyclin-dependent protein kinase activating kinase activity	1
MF	cyclin-dependent protein kinase activity	3
MF	cyclin-dependent protein serine/threonine kinase activator activity	10
MF	cyclin-dependent protein serine/threonine kinase activity	15
MF	cyclin-dependent protein serine/threonine kinase regulator activity	15
MF	cystathionine beta-synthase activity	2
MF	cysteine-tRNA ligase activity	2
MF	cysteine-type endopeptidase activity	16
MF	cysteine-type peptidase activity	49
MF	cytidine deaminase activity	5
MF	cytidine transmembrane transporter activity	2
MF	cytidylyltransferase activity	2
MF	cytochrome-c oxidase activity	6
MF	cytoskeletal motor activity	25
MF	cytoskeletal protein binding	126
MF	dITP diphosphatase activity	2
MF	dUTP diphosphatase activity	1
MF	damaged DNA binding	48
MF	deacetylase activity	8
MF	deaminase activity	2
MF	dehydrodolichyl diphosphate synthase activity	2
MF	demethylase activity	10
MF	deoxycytidyl transferase activity	2
MF	deoxyribonuclease activity	20
MF	deubiquitinase activity	20
MF	diacylglycerol binding	7
MF	diamine N-acetyltransferase activity	4
MF	dicarboxylic acid transmembrane transporter activity	10
MF	dihydrolipoyl dehydrogenase activity	2
MF	dihydrolipoyllysine-residue acetyltransferase activity	3
MF	dihydrolipoyllysine-residue succinyltransferase activity	2
MF	dihydroorotase activity	3
MF	dimethylallyltranstransferase activity	2
MF	dioxygenase activity	13
MF	dipeptidase activity	5
MF	dipeptide transmembrane transporter activity	6
MF	dipeptidyl-peptidase activity	4
MF	diphthine synthase activity	2
MF	disulfide oxidoreductase activity	56
MF	dolichol kinase activity	3
MF	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6
MF	dolichyl-phosphate-mannose-protein mannosyltransferase activity	9
MF	double-strand/single-strand DNA junction binding	1
MF	double-stranded DNA 5'-3' exodeoxyribonuclease activity	1
MF	double-stranded DNA binding	308
MF	double-stranded DNA exodeoxyribonuclease activity	2
MF	double-stranded RNA binding	14
MF	double-stranded telomeric DNA binding	3
MF	electron transfer activity	25
MF	electron-transferring-flavoprotein dehydrogenase activity	3
MF	endochitinase activity	1
MF	endodeoxyribonuclease activity	20
MF	endodeoxyribonuclease activity, producing 5'-phosphomonoesters	1
MF	endonuclease activity	119
MF	endopeptidase activator activity	15
MF	endopeptidase activity	207
MF	endopeptidase inhibitor activity	6
MF	endopeptidase regulator activity	4
MF	endoribonuclease activity	91
MF	endoribonuclease activity, producing 5'-phosphomonoesters	16
MF	enoyl-CoA hydratase activity	12
MF	enzyme activator activity	228
MF	enzyme binding	329
MF	enzyme inhibitor activity	60
MF	enzyme regulator activity	295
MF	epoxide hydrolase activity	5
MF	estradiol binding	2
MF	ethanolamine kinase activity	3
MF	ethanolamine-phosphate cytidylyltransferase activity	2
MF	ether hydrolase activity	1
MF	eukaryotic initiation factor 4G binding	2
MF	exonuclease activity	50
MF	exopeptidase activity	30
MF	exoribonuclease activity	15
MF	exoribonuclease activity, producing 5'-phosphomonoesters	5
MF	extracellular matrix binding	7
MF	farnesyltranstransferase activity	6
MF	fatty acid ligase activity	2
MF	fatty acid synthase activity	2
MF	fatty-acyl-CoA binding	4
MF	ferredoxin-NADP+ reductase activity	1
MF	ferric iron binding	3
MF	ferric-chelate reductase activity	1
MF	ferrochelatase activity	2
MF	ferrous iron binding	12
MF	ferrous iron transmembrane transporter activity	12
MF	ferroxidase activity	10
MF	fibronectin binding	6
MF	flap endonuclease activity	1
MF	flavin adenine dinucleotide binding	49
MF	formate-tetrahydrofolate ligase activity	2
MF	four-way junction DNA binding	9
MF	four-way junction helicase activity	4
MF	fructose-6-phosphate binding	6
MF	galactokinase activity	4
MF	gamma-tubulin binding	5
MF	general transcription initiation factor activity	2
MF	geranyltranstransferase activity	2
MF	glucose binding	3
MF	glucose-6-phosphate dehydrogenase activity	2
MF	glucosidase activity	12
MF	glucosyltransferase activity	18
MF	glucuronosyltransferase activity	6
MF	glutamate 5-kinase activity	2
MF	glutamate decarboxylase activity	2
MF	glutamate dehydrogenase (NADP+) activity	1
MF	glutamate dehydrogenase [NAD(P)+] activity	1
MF	glutamate-tRNA ligase activity	3
MF	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	2
MF	glutamine-tRNA ligase activity	3
MF	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4
MF	glutathione disulfide oxidoreductase activity	6
MF	glutathione peroxidase activity	5
MF	glutathione transferase activity	15
MF	glutathione-disulfide reductase (NADPH) activity	4
MF	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	4
MF	glycerol-3-phosphate O-acyltransferase activity	6
MF	glycerol-3-phosphate dehydrogenase [NAD+] activity	1
MF	glycerone kinase activity	2
MF	glycerone-phosphate O-acyltransferase activity	3
MF	glycine dehydrogenase (decarboxylating) activity	2
MF	glycine transmembrane transporter activity	5
MF	glycogenin glucosyltransferase activity	2
MF	glycolipid mannosyltransferase activity	2
MF	glycosyltransferase activity	80
MF	guanine/thymine mispair binding	4
MF	guanyl ribonucleotide binding	30
MF	guanyl-nucleotide exchange factor activity	104
MF	heat shock protein binding	40
MF	helicase activity	128
MF	heme binding	24
MF	heterocyclic compound binding	333
MF	heteroduplex DNA loop binding	1
MF	hexosyltransferase activity	26
MF	histidine-tRNA ligase activity	4
MF	histone H3-methyl-lysine-36 demethylase activity	4
MF	histone H3-methyl-lysine-9 demethylase activity	4
MF	histone acetyltransferase activity	21
MF	histone acetyltransferase activity (H4-K12 specific)	1
MF	histone acetyltransferase activity (H4-K5 specific)	2
MF	histone acetyltransferase activity (H4-K8 specific)	1
MF	histone binding	126
MF	histone deacetylase activity	6
MF	histone demethylase activity	4
MF	histone kinase activity	1
MF	histone methyltransferase activity	9
MF	histone methyltransferase activity (H3-K4 specific)	7
MF	histone serine kinase activity	2
MF	histone-arginine N-methyltransferase activity	5
MF	histone-glutamine methyltransferase activity	2
MF	histone-lysine N-methyltransferase activity	7
MF	holo-[acyl-carrier-protein] synthase activity	3
MF	hormone binding	8
MF	hydro-lyase activity	26
MF	hydrolase activity	1841
MF	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	228
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	18
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	2
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	4
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	12
MF	hydrolase activity, acting on ester bonds	340
MF	hydrolase activity, acting on glycosyl bonds	60
MF	hydrolase activity, hydrolyzing N-glycosyl compounds	4
MF	hydrolase activity, hydrolyzing O-glycosyl compounds	64
MF	hydroxymethyl-, formyl- and related transferase activity	1
MF	hydroxymethylbilane synthase activity	2
MF	hydroxymethylglutaryl-CoA reductase (NADPH) activity	2
MF	hydroxymethylglutaryl-CoA synthase activity	4
MF	hypoxanthine phosphoribosyltransferase activity	2
MF	identical protein binding	72
MF	immunoglobulin binding	1
MF	indoleamine 2,3-dioxygenase activity	4
MF	inorganic cation transmembrane transporter activity	99
MF	inorganic phosphate transmembrane transporter activity	8
MF	inositol tetrakisphosphate 3-kinase activity	1
MF	inositol tetrakisphosphate 6-kinase activity	2
MF	inositol tetrakisphosphate kinase activity	1
MF	inositol-1,3,4,5,6-pentakisphosphate kinase activity	3
MF	inositol-1,4,5-trisphosphate 3-kinase activity	4
MF	inositol-1,4,5-trisphosphate 6-kinase activity	1
MF	integrin binding	81
MF	intramolecular oxidoreductase activity, transposing C=C bonds	1
MF	intramolecular transferase activity, phosphotransferases	3
MF	ion channel activity	48
MF	ion gated channel activity	3
MF	ion transmembrane transporter activity	325
MF	iron chaperone activity	2
MF	iron ion binding	24
MF	iron ion transmembrane transporter activity	18
MF	iron-sulfur cluster binding	36
MF	isocitrate dehydrogenase (NAD+) activity	4
MF	isocitrate dehydrogenase (NADP+) activity	6
MF	isoleucine-tRNA ligase activity	3
MF	isomerase activity	84
MF	isopentenyl-diphosphate delta-isomerase activity	2
MF	isopeptidase activity	1
MF	kinase activator activity	30
MF	kinase activity	432
MF	kinase binding	48
MF	kinase inhibitor activity	8
MF	kinase regulator activity	30
MF	kynurenine 3-monooxygenase activity	3
MF	lactoylglutathione lyase activity	1
MF	laminin binding	7
MF	large ribosomal subunit rRNA binding	4
MF	leak channel activity	3
MF	leucine-tRNA ligase activity	3
MF	ligase activity	82
MF	ligase activity, forming carbon-nitrogen bonds	14
MF	lipase activity	52
MF	lipid binding	266
MF	lipid transporter activity	48
MF	lipoate synthase activity	2
MF	long-chain fatty acid transporter activity	16
MF	long-chain fatty acyl-CoA binding	2
MF	lyase activity	96
MF	lysine N-methyltransferase activity	4
MF	lysine-acetylated histone binding	6
MF	lysophosphatidic acid acyltransferase activity	2
MF	lysophospholipase activity	16
MF	lysophospholipid acyltransferase activity	4
MF	mRNA 3'-UTR binding	7
MF	mRNA 5'-UTR binding	4
MF	mRNA binding	420
MF	macrolide binding	2
MF	magnesium ion binding	42
MF	malate dehydrogenase activity	3
MF	malate transmembrane transporter activity	1
MF	manganese ion binding	6
MF	manganese ion transmembrane transporter activity	30
MF	mannose binding	6
MF	mannose-6-phosphate isomerase activity	2
MF	mannose-ethanolamine phosphotransferase activity	3
MF	mannosidase activity	1
MF	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	4
MF	mannosyltransferase activity	36
MF	membrane insertase activity	4
MF	metal ion binding	304
MF	metal ion transmembrane transporter activity	57
MF	metal ion:proton antiporter activity	6
MF	metalloaminopeptidase activity	36
MF	metallocarboxypeptidase activity	8
MF	metallochaperone activity	1
MF	metalloendopeptidase activity	56
MF	metalloexopeptidase activity	28
MF	metallopeptidase activity	144
MF	methenyltetrahydrofolate cyclohydrolase activity	4
MF	methionine adenosyltransferase activity	2
MF	methionine-tRNA ligase activity	3
MF	methylated histone binding	7
MF	methylenetetrahydrofolate dehydrogenase (NAD+) activity	5
MF	methylenetetrahydrofolate dehydrogenase (NADP+) activity	4
MF	methylenetetrahydrofolate reductase (NAD(P)H) activity	8
MF	methyltransferase activity	138
MF	microtubule binding	28
MF	microtubule motor activity	32
MF	minus-end-directed microtubule motor activity	8
MF	misfolded protein binding	21
MF	mismatched DNA binding	6
MF	mitochondrial promoter sequence-specific DNA binding	2
MF	mitochondrial ribosome binding	4
MF	mitochondrion targeting sequence binding	6
MF	mitogen-activated protein kinase binding	5
MF	mitogen-activated protein kinase kinase kinase binding	5
MF	modification-dependent protein binding	26
MF	modified amino acid binding	4
MF	molecular adaptor activity	120
MF	molecular_function	1039
MF	monocarboxylic acid transmembrane transporter activity	16
MF	monooxygenase activity	24
MF	monosaccharide binding	8
MF	monovalent cation:proton antiporter activity	3
MF	neurotransmitter transmembrane transporter activity	7
MF	neutral amino acid transmembrane transporter activity	21
MF	nitric oxide dioxygenase activity	1
MF	non-membrane spanning protein tyrosine phosphatase activity	5
MF	nuclear export signal receptor activity	12
MF	nuclear import signal receptor activity	15
MF	nuclear localization sequence binding	10
MF	nuclease activity	130
MF	nucleic acid binding	1464
MF	nucleobase transmembrane transporter activity	2
MF	nucleoside binding	30
MF	nucleoside diphosphate kinase activity	3
MF	nucleoside kinase activity	1
MF	nucleoside monophosphate kinase activity	6
MF	nucleoside transmembrane transporter activity	4
MF	nucleoside-diphosphatase activity	3
MF	nucleoside-triphosphatase activity	436
MF	nucleoside-triphosphate diphosphatase activity	6
MF	nucleosomal DNA binding	15
MF	nucleosome binding	35
MF	nucleotidase activity	2
MF	nucleotide binding	642
MF	nucleotide diphosphatase activity	6
MF	nucleotide-sugar transmembrane transporter activity	6
MF	nucleotidyltransferase activity	80
MF	oligosaccharyl transferase activity	1
MF	omega-amidase activity	2
MF	organic acid binding	4
MF	organic acid transmembrane transporter activity	18
MF	organic anion transmembrane transporter activity	135
MF	organic cation transmembrane transporter activity	20
MF	organic cyclic compound binding	678
MF	ornithine carbamoyltransferase activity	2
MF	orotidine-5'-phosphate decarboxylase activity	2
MF	osmosensor activity	1
MF	oxalate transmembrane transporter activity	4
MF	oxaloacetate transmembrane transporter activity	1
MF	oxidized purine nucleobase lesion DNA N-glycosylase activity	1
MF	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	2
MF	oxidoreductase activity	470
MF	oxidoreductase activity, acting on NAD(P)H	39
MF	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4
MF	oxidoreductase activity, acting on a sulfur group of donors	64
MF	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4
MF	oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor	1
MF	oxidoreductase activity, acting on metal ions	8
MF	oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor	2
MF	oxidoreductase activity, acting on other nitrogenous compounds as donors	2
MF	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	17
MF	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	16
MF	oxidoreductase activity, acting on peroxide as acceptor	12
MF	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	1
MF	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3
MF	oxidoreductase activity, acting on the CH-CH group of donors	9
MF	oxidoreductase activity, acting on the CH-NH group of donors	9
MF	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	140
MF	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	18
MF	oxoglutarate dehydrogenase (succinyl-transferring) activity	8
MF	oxysterol binding	10
MF	palmitoyltransferase activity	5
MF	passive transmembrane transporter activity	9
MF	peptidase activator activity	15
MF	peptidase activity	392
MF	peptidase inhibitor activity	3
MF	peptide N-acetyltransferase activity	5
MF	peptide alpha-N-acetyltransferase activity	6
MF	peptide binding	60
MF	peptide transmembrane transporter activity	12
MF	peptide-lysine-N-acetyltransferase activity	6
MF	peptidyl-proline 4-dioxygenase activity	18
MF	peptidyl-proline dioxygenase activity	27
MF	peptidyl-prolyl cis-trans isomerase activity	32
MF	peptidyltransferase activity	2
MF	peroxidase activity	28
MF	peroxiredoxin activity	3
MF	phenylalanine-tRNA ligase activity	4
MF	phosphatase activator activity	12
MF	phosphatase activity	90
MF	phosphatase inhibitor activity	6
MF	phosphatase regulator activity	35
MF	phosphate ion transmembrane transporter activity	3
MF	phosphatidate phosphatase activity	6
MF	phosphatidic acid binding	8
MF	phosphatidylethanolamine binding	4
MF	phosphatidylinositol 3-kinase activity	4
MF	phosphatidylinositol binding	120
MF	phosphatidylinositol bisphosphate binding	28
MF	phosphatidylinositol bisphosphate phosphatase activity	1
MF	phosphatidylinositol deacylase activity	2
MF	phosphatidylinositol kinase activity	3
MF	phosphatidylinositol phosphate 5-phosphatase activity	3
MF	phosphatidylinositol phosphate binding	80
MF	phosphatidylinositol transfer activity	5
MF	phosphatidylinositol-3,4,5-trisphosphate binding	9
MF	phosphatidylinositol-3,4-bisphosphate binding	4
MF	phosphatidylinositol-3,5-bisphosphate binding	12
MF	phosphatidylinositol-3-phosphate binding	25
MF	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6
MF	phosphatidylinositol-4,5-bisphosphate binding	35
MF	phosphatidylinositol-4-phosphate binding	20
MF	phosphatidylinositol-5-phosphate binding	20
MF	phosphatidylserine binding	18
MF	phosphatidylserine decarboxylase activity	3
MF	phosphoenolpyruvate carboxykinase activity	1
MF	phosphoglucomutase activity	8
MF	phosphogluconate dehydrogenase (decarboxylating) activity	2
MF	phosphoglycerate kinase activity	4
MF	phospholipase A2 activity	6
MF	phospholipase activity	16
MF	phospholipid binding	252
MF	phospholipid scramblase activity	10
MF	phospholipid transporter activity	24
MF	phosphomannomutase activity	3
MF	phosphomevalonate kinase activity	3
MF	phosphopantetheine binding	1
MF	phosphopantothenoylcysteine decarboxylase activity	4
MF	phosphopentomutase activity	1
MF	phosphoprotein binding	15
MF	phosphoprotein phosphatase activity	50
MF	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity	2
MF	phosphoric diester hydrolase activity	15
MF	phosphoserine residue binding	12
MF	phosphotransferase activity, alcohol group as acceptor	141
MF	phosphotransferase activity, for other substituted phosphate groups	2
MF	plus-end-directed microtubule motor activity	8
MF	poly(A) binding	15
MF	poly(A)-specific ribonuclease activity	6
MF	polydeoxyribonucleotide 5'-hydroxyl-kinase activity	3
MF	polydeoxyribonucleotide kinase activity	1
MF	polynucleotide 5'-hydroxyl-kinase activity	4
MF	polyprenyltransferase activity	2
MF	polysaccharide binding	3
MF	polysome binding	2
MF	polyubiquitin modification-dependent protein binding	60
MF	potassium channel activity	7
MF	potassium ion leak channel activity	3
MF	potassium ion transmembrane transporter activity	10
MF	potassium:proton antiporter activity	6
MF	pre-mRNA 5'-splice site binding	2
MF	pre-mRNA binding	15
MF	pre-mRNA branch point binding	1
MF	prenyltransferase activity	24
MF	procollagen-proline 4-dioxygenase activity	18
MF	proline-rich region binding	6
MF	proline-tRNA ligase activity	6
MF	promoter-specific chromatin binding	15
MF	proteasome binding	20
MF	proteasome-activating activity	5
MF	protein C-terminus binding	6
MF	protein N-terminus binding	4
MF	protein binding	970
MF	protein deacetylase activity	3
MF	protein dimerization activity	90
MF	protein disulfide isomerase activity	60
MF	protein domain specific binding	20
MF	protein farnesyltransferase activity	2
MF	protein folding chaperone	36
MF	protein heterodimerization activity	72
MF	protein histidine kinase activity	1
MF	protein homodimerization activity	42
MF	protein kinase C binding	6
MF	protein kinase activator activity	42
MF	protein kinase activity	240
MF	protein kinase binding	42
MF	protein kinase inhibitor activity	12
MF	protein kinase regulator activity	50
MF	protein methyltransferase activity	24
MF	protein phosphatase activator activity	12
MF	protein phosphatase inhibitor activity	12
MF	protein phosphatase regulator activity	40
MF	protein phosphorylated amino acid binding	6
MF	protein prenyltransferase activity	1
MF	protein self-association	7
MF	protein serine/threonine kinase activator activity	12
MF	protein serine/threonine kinase activity	198
MF	protein serine/threonine kinase inhibitor activity	6
MF	protein serine/threonine phosphatase activity	42
MF	protein serine/threonine phosphatase inhibitor activity	6
MF	protein tag	4
MF	protein transmembrane transporter activity	6
MF	protein tyrosine kinase activity	9
MF	protein tyrosine phosphatase activity	16
MF	protein-arginine N-methyltransferase activity	6
MF	protein-arginine omega-N monomethyltransferase activity	2
MF	protein-arginine omega-N symmetric methyltransferase activity	4
MF	protein-containing complex binding	385
MF	protein-disulfide reductase (NAD(P)) activity	6
MF	protein-disulfide reductase activity	84
MF	protein-glutamine N-methyltransferase activity	1
MF	protein-lysine N-methyltransferase activity	8
MF	protein-macromolecule adaptor activity	140
MF	protein-membrane adaptor activity	18
MF	protein-transporting ATPase activity	1
MF	protoheme IX farnesyltransferase activity	1
MF	proton transmembrane transporter activity	95
MF	proton-transporting ATPase activity, rotational mechanism	45
MF	pseudouridine 5'-phosphatase activity	1
MF	pseudouridine synthase activity	16
MF	purine nucleoside binding	60
MF	purine nucleotide binding	188
MF	purine nucleotide transmembrane transporter activity	12
MF	purine ribonucleoside triphosphate binding	88
MF	purine ribonucleotide binding	92
MF	purine-nucleoside phosphorylase activity	4
MF	pyridoxal kinase activity	3
MF	pyridoxal phosphate binding	18
MF	pyrimidine nucleoside transmembrane transporter activity	1
MF	pyrimidine nucleotide transmembrane transporter activity	2
MF	pyrimidine nucleotide-sugar transmembrane transporter activity	1
MF	pyrimidine-specific mismatch base pair DNA N-glycosylase activity	3
MF	pyrophosphatase activity	342
MF	pyruvate dehydrogenase (acetyl-transferring) activity	4
MF	pyruvate dehydrogenase (acetyl-transferring) kinase activity	15
MF	pyruvate kinase activity	4
MF	pyruvate transmembrane transporter activity	2
MF	quaternary ammonium group transmembrane transporter activity	2
MF	quinone binding	3
MF	rDNA binding	15
MF	rRNA (adenine) methyltransferase activity	1
MF	rRNA (adenine-N6,N6-)-dimethyltransferase activity	4
MF	rRNA (adenine-N6-)-methyltransferase activity	2
MF	rRNA (guanine) methyltransferase activity	4
MF	rRNA (guanosine-2'-O-)-methyltransferase activity	1
MF	rRNA (uridine-2'-O-)-methyltransferase activity	3
MF	rRNA (uridine-N3-)-methyltransferase activity	1
MF	rRNA binding	55
MF	rRNA methyltransferase activity	6
MF	rRNA primary transcript binding	6
MF	racemase and epimerase activity	2
MF	racemase and epimerase activity, acting on carbohydrates and derivatives	4
MF	recombination hotspot binding	3
MF	regulatory region RNA binding	2
MF	riboflavin binding	1
MF	riboflavin reductase (NADPH) activity	1
MF	riboflavin transmembrane transporter activity	3
MF	ribonuclease activity	85
MF	ribonuclease inhibitor activity	1
MF	ribonucleoprotein complex binding	100
MF	ribonucleoside binding	30
MF	ribonucleotide binding	95
MF	ribose phosphate diphosphokinase activity	5
MF	ribose-5-phosphate isomerase activity	4
MF	ribosomal large subunit binding	10
MF	ribosomal small subunit binding	12
MF	ribosome binding	56
MF	ribulose-phosphate 3-epimerase activity	2
MF	saccharopine dehydrogenase (NAD+, L-lysine-forming) activity	1
MF	saccharopine dehydrogenase activity	2
MF	satellite DNA binding	2
MF	secondary active transmembrane transporter activity	16
MF	selenite:proton symporter activity	2
MF	sequence-specific DNA binding	282
MF	sequence-specific double-stranded DNA binding	132
MF	sequence-specific single stranded DNA binding	6
MF	serine C-palmitoyltransferase activity	2
MF	serine hydrolase activity	24
MF	serine-pyruvate transaminase activity	1
MF	serine-tRNA ligase activity	3
MF	serine-type carboxypeptidase activity	10
MF	serine-type endopeptidase activity	32
MF	serine-type endopeptidase inhibitor activity	6
MF	serine-type exopeptidase activity	2
MF	serine-type peptidase activity	49
MF	signal recognition particle binding	8
MF	signal sequence binding	15
MF	signaling adaptor activity	9
MF	signaling receptor activity	16
MF	signaling receptor binding	72
MF	single base insertion or deletion binding	1
MF	single-stranded DNA 3'-5' exodeoxyribonuclease activity	4
MF	single-stranded DNA 5'-3' exodeoxyribonuclease activity	3
MF	single-stranded DNA binding	136
MF	single-stranded DNA endodeoxyribonuclease activity	12
MF	single-stranded DNA exodeoxyribonuclease activity	4
MF	single-stranded RNA binding	49
MF	single-stranded telomeric DNA binding	9
MF	small GTPase binding	96
MF	small molecule binding	238
MF	small ribosomal subunit rRNA binding	6
MF	snRNA binding	6
MF	snRNP binding	2
MF	snoRNA binding	48
MF	sodium ion transmembrane transporter activity	8
MF	sodium:proton antiporter activity	5
MF	soluble NSF attachment protein activity	1
MF	solute:proton antiporter activity	18
MF	solute:proton symporter activity	4
MF	spermidine synthase activity	3
MF	spermine synthase activity	2
MF	sphingolipid transporter activity	3
MF	sphingosine N-acyltransferase activity	4
MF	squalene monooxygenase activity	3
MF	steroid binding	54
MF	steroid hormone binding	6
MF	sterol 14-demethylase activity	2
MF	sterol binding	12
MF	sterol esterase activity	5
MF	sterol transporter activity	6
MF	structural constituent of cytoskeleton	8
MF	structural constituent of nuclear pore	35
MF	structural constituent of ribosome	387
MF	structural molecule activity	448
MF	succinate dehydrogenase (ubiquinone) activity	3
MF	succinate dehydrogenase activity	2
MF	succinate-CoA ligase (ADP-forming) activity	3
MF	succinate-CoA ligase (GDP-forming) activity	2
MF	succinate-semialdehyde dehydrogenase (NAD+) activity	3
MF	sulfate adenylyltransferase (ATP) activity	3
MF	sulfate transmembrane transporter activity	15
MF	sulfuric ester hydrolase activity	2
MF	sulfurtransferase activity	6
MF	superoxide dismutase activity	6
MF	symporter activity	10
MF	syntaxin binding	14
MF	tRNA (cytosine) methyltransferase activity	2
MF	tRNA (cytosine-5-)-methyltransferase activity	4
MF	tRNA (guanine(37)-N(1))-methyltransferase activity	1
MF	tRNA (guanine) methyltransferase activity	2
MF	tRNA (guanine-N1-)-methyltransferase activity	2
MF	tRNA (uracil) methyltransferase activity	6
MF	tRNA 2'-O-methyltransferase activity	1
MF	tRNA binding	77
MF	tRNA dihydrouridine synthase activity	2
MF	tRNA dimethylallyltransferase activity	3
MF	tRNA methyltransferase activity	28
MF	telomerase RNA binding	6
MF	telomerase inhibitor activity	6
MF	telomeric DNA binding	30
MF	tetrahydrofolylpolyglutamate synthase activity	3
MF	tetrapyrrole binding	3
MF	thiamine diphosphokinase activity	1
MF	thiol oxidase activity	2
MF	thiol-dependent deubiquitinase	28
MF	thiolester hydrolase activity	3
MF	thioredoxin peroxidase activity	15
MF	thioredoxin-disulfide reductase activity	12
MF	thiosulfate sulfurtransferase activity	3
MF	thiosulfate transmembrane transporter activity	1
MF	threonine-tRNA ligase activity	6
MF	thymidylate kinase activity	2
MF	thymidylate synthase activity	3
MF	trans-hexaprenyltranstransferase activity	1
MF	transaminase activity	21
MF	transcription cis-regulatory region binding	144
MF	transcription coactivator activity	54
MF	transcription coregulator activity	80
MF	transcription corepressor activity	40
MF	transcription factor binding	120
MF	transcription regulator activity	48
MF	transcription regulatory region nucleic acid binding	26
MF	transferase activity	1365
MF	transferase activity, transferring alkyl or aryl (other than methyl) groups	21
MF	transition metal ion binding	42
MF	transition metal ion transmembrane transporter activity	22
MF	translation elongation factor activity	30
MF	translation elongation factor binding	1
MF	translation factor activity, RNA binding	114
MF	translation initiation factor activity	72
MF	translation initiation factor binding	30
MF	translation regulator activity	10
MF	translation release factor activity	25
MF	translation release factor activity, codon specific	1
MF	translation repressor activity	5
MF	translation repressor activity, mRNA regulatory element binding	6
MF	translation termination factor activity	5
MF	transmembrane signaling receptor activity	16
MF	transmembrane transporter activity	510
MF	transporter activity	315
MF	tricarboxylic acid transmembrane transporter activity	2
MF	triose-phosphate isomerase activity	4
MF	tripeptide transmembrane transporter activity	2
MF	tryptophan-tRNA ligase activity	4
MF	tubulin binding	56
MF	tyrosine-tRNA ligase activity	3
MF	ubiquinone binding	4
MF	ubiquitin binding	135
MF	ubiquitin conjugating enzyme activity	20
MF	ubiquitin conjugating enzyme binding	4
MF	ubiquitin protein ligase activity	126
MF	ubiquitin protein ligase binding	42
MF	ubiquitin-like protein binding	16
MF	ubiquitin-like protein conjugating enzyme binding	2
MF	ubiquitin-like protein ligase binding	24
MF	ubiquitin-like protein transferase activity	40
MF	ubiquitin-like protein-specific protease activity	10
MF	ubiquitin-protein transferase activity	136
MF	unfolded protein binding	243
MF	uracil DNA N-glycosylase activity	4
MF	uridine kinase activity	2
MF	uridylate kinase activity	1
MF	uridylyltransferase activity	1
MF	uroporphyrinogen decarboxylase activity	2
MF	uroporphyrinogen-III synthase activity	3
MF	valine-tRNA ligase activity	6
MF	very long-chain fatty acid-CoA ligase activity	5
MF	vitamin B6 binding	3
MF	vitamin binding	10
MF	vitamin transmembrane transporter activity	2
MF	voltage-gated anion channel activity	8
MF	voltage-gated cation channel activity	2
MF	voltage-gated chloride channel activity	12
MF	voltage-gated ion channel activity	12
MF	voltage-gated potassium channel activity	7
MF	water channel activity	6
MF	water transmembrane transporter activity	3
MF	xenobiotic transmembrane transporter activity	21
MF	xylulokinase activity	3
MF	zinc ion binding	128
MF	zinc ion transmembrane transporter activity	18