ONTOLOGY	Term	Count
BP	'de novo' IMP biosynthetic process	6
BP	'de novo' NAD biosynthetic process	1
BP	'de novo' NAD biosynthetic process from tryptophan	2
BP	'de novo' UMP biosynthetic process	1
BP	'de novo' cotranslational protein folding	2
BP	'de novo' posttranslational protein folding	6
BP	'de novo' protein folding	24
BP	'de novo' pyrimidine nucleobase biosynthetic process	20
BP	2-oxoglutarate metabolic process	15
BP	5S class rRNA transcription by RNA polymerase III	4
BP	7-methylguanosine RNA capping	1
BP	7-methylguanosine mRNA capping	5
BP	ADP metabolic process	8
BP	ADP transport	12
BP	ATP biosynthetic process	60
BP	ATP export	8
BP	ATP generation from ADP	10
BP	ATP metabolic process	102
BP	ATP synthesis coupled electron transport	4
BP	ATP synthesis coupled proton transport	15
BP	ATP transport	35
BP	Arp2/3 complex-mediated actin nucleation	15
BP	C-terminal protein lipidation	4
BP	CAAX-box protein processing	6
BP	CENP-A containing nucleosome assembly	4
BP	COPII vesicle coating	5
BP	COPII-coated vesicle budding	4
BP	CTP biosynthetic process	4
BP	CTP metabolic process	1
BP	CUT catabolic process	12
BP	D-amino acid catabolic process	2
BP	D-gluconate catabolic process	2
BP	D-ribose metabolic process	2
BP	D-serine catabolic process	2
BP	D-serine metabolic process	1
BP	DNA biosynthetic process	48
BP	DNA clamp unloading	2
BP	DNA conformation change	42
BP	DNA damage checkpoint signaling	77
BP	DNA double-strand break processing	3
BP	DNA duplex unwinding	78
BP	DNA geometric change	34
BP	DNA integration	8
BP	DNA ligation	4
BP	DNA metabolic process	594
BP	DNA packaging	23
BP	DNA protection	4
BP	DNA recombinase assembly	3
BP	DNA recombination	315
BP	DNA repair	670
BP	DNA replication	287
BP	DNA replication checkpoint signaling	20
BP	DNA replication initiation	72
BP	DNA replication preinitiation complex assembly	2
BP	DNA replication proofreading	2
BP	DNA replication, Okazaki fragment processing	11
BP	DNA replication, removal of RNA primer	16
BP	DNA replication, synthesis of RNA primer	12
BP	DNA replication-independent nucleosome assembly	9
BP	DNA replication-independent nucleosome organization	4
BP	DNA strand elongation	21
BP	DNA strand elongation involved in DNA replication	60
BP	DNA strand elongation involved in mitotic DNA replication	6
BP	DNA synthesis involved in DNA repair	54
BP	DNA synthesis involved in UV-damage excision repair	4
BP	DNA topological change	28
BP	DNA unwinding involved in DNA replication	9
BP	DNA-dependent DNA replication	287
BP	DNA-templated transcription open complex formation	2
BP	DNA-templated transcription, elongation	34
BP	DNA-templated transcription, initiation	64
BP	DNA-templated transcription, termination	60
BP	ER to Golgi ceramide transport	3
BP	ER-associated misfolded protein catabolic process	15
BP	ER-dependent peroxisome organization	3
BP	ER-nucleus signaling pathway	1
BP	ERAD pathway	161
BP	FAD biosynthetic process	2
BP	FAD transmembrane transport	2
BP	FMN biosynthetic process	2
BP	G protein-coupled receptor signaling pathway	70
BP	G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	10
BP	G-quadruplex DNA unwinding	4
BP	G1/S transition of mitotic cell cycle	56
BP	G2/M transition of mitotic cell cycle	32
BP	GDP biosynthetic process	1
BP	GDP metabolic process	1
BP	GMP biosynthetic process	3
BP	GMP metabolic process	4
BP	GPI anchor biosynthetic process	32
BP	GPI anchor metabolic process	15
BP	GTP biosynthetic process	3
BP	GTP metabolic process	3
BP	Golgi calcium ion transport	6
BP	Golgi localization	4
BP	Golgi organization	16
BP	Golgi to endosome transport	21
BP	Golgi to plasma membrane protein transport	30
BP	Golgi to plasma membrane transport	54
BP	Golgi to vacuole transport	14
BP	Golgi vesicle budding	15
BP	Golgi vesicle docking	1
BP	Golgi vesicle transport	225
BP	IMP biosynthetic process	4
BP	IMP metabolic process	4
BP	IRE1-mediated unfolded protein response	5
BP	IRES-dependent translational initiation of linear mRNA	1
BP	L-alpha-amino acid transmembrane transport	21
BP	L-amino acid transport	14
BP	L-arginine import across plasma membrane	8
BP	L-arginine transmembrane transport	6
BP	L-arginine transport	3
BP	L-ascorbic acid biosynthetic process	2
BP	L-ascorbic acid metabolic process	5
BP	L-aspartate transmembrane transport	3
BP	L-glutamate import	1
BP	L-glutamate transmembrane transport	5
BP	L-histidine transmembrane transport	10
BP	L-kynurenine metabolic process	1
BP	L-lysine transmembrane transport	8
BP	L-methionine salvage	5
BP	L-methionine salvage from methylthioadenosine	15
BP	L-serine biosynthetic process	10
BP	L-serine catabolic process	2
BP	L-serine metabolic process	12
BP	L-serine transport	3
BP	MAPK cascade	40
BP	N-glycan processing	9
BP	N-terminal peptidyl-glutamic acid acetylation	2
BP	N-terminal peptidyl-glycine methylation	1
BP	N-terminal peptidyl-methionine acetylation	6
BP	N-terminal peptidyl-serine acetylation	1
BP	N-terminal protein amino acid acetylation	15
BP	N-terminal protein amino acid methylation	2
BP	N-terminal protein amino acid modification	12
BP	NAD biosynthetic process	18
BP	NAD metabolic process	45
BP	NADH metabolic process	28
BP	NADH oxidation	9
BP	NADP biosynthetic process	2
BP	NADP metabolic process	24
BP	NLS-bearing protein import into nucleus	20
BP	Okazaki fragment processing involved in mitotic DNA replication	4
BP	P-body assembly	15
BP	RNA 3'-end processing	69
BP	RNA 5'-end processing	12
BP	RNA biosynthetic process	65
BP	RNA catabolic process	224
BP	RNA destabilization	4
BP	RNA export from nucleus	228
BP	RNA folding	1
BP	RNA import into mitochondrion	1
BP	RNA import into nucleus	2
BP	RNA localization	94
BP	RNA metabolic process	1482
BP	RNA methylation	60
BP	RNA modification	31
BP	RNA phosphodiester bond hydrolysis	152
BP	RNA phosphodiester bond hydrolysis, endonucleolytic	69
BP	RNA phosphodiester bond hydrolysis, exonucleolytic	55
BP	RNA polyadenylation	27
BP	RNA polymerase II preinitiation complex assembly	36
BP	RNA polymerase III preinitiation complex assembly	1
BP	RNA processing	870
BP	RNA secondary structure unwinding	26
BP	RNA splicing	264
BP	RNA splicing, via transesterification reactions	112
BP	RNA surveillance	9
BP	RNA transport	240
BP	RNA-dependent DNA biosynthetic process	18
BP	Ras protein signal transduction	54
BP	Rho protein signal transduction	10
BP	S-adenosyl-L-methionine transmembrane transport	2
BP	S-adenosyl-L-methionine transport	2
BP	S-adenosylhomocysteine catabolic process	1
BP	S-adenosylhomocysteine metabolic process	2
BP	S-adenosylmethionine biosynthetic process	4
BP	S-adenosylmethionine cycle	2
BP	S-adenosylmethionine metabolic process	6
BP	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	10
BP	SNARE complex assembly	8
BP	SNARE complex disassembly	4
BP	SRP-dependent cotranslational protein targeting to membrane	36
BP	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	6
BP	SRP-dependent cotranslational protein targeting to membrane, translocation	32
BP	TOR signaling	48
BP	TORC1 signaling	8
BP	TORC2 signaling	10
BP	U1 snRNA 3'-end processing	2
BP	U2-type prespliceosome assembly	1
BP	U4 snRNA 3'-end processing	5
BP	U5 snRNA 3'-end processing	4
BP	UDP-N-acetylglucosamine biosynthetic process	4
BP	UDP-N-acetylglucosamine metabolic process	3
BP	UDP-galactose transmembrane transport	3
BP	UDP-glucose metabolic process	6
BP	UDP-glucose transmembrane transport	2
BP	UDP-glucosylation	1
BP	UMP biosynthetic process	3
BP	UV-damage excision repair	24
BP	[2Fe-2S] cluster assembly	16
BP	acetaldehyde metabolic process	2
BP	acetyl-CoA biosynthetic process	25
BP	acetyl-CoA biosynthetic process from pyruvate	6
BP	acetyl-CoA metabolic process	35
BP	actin cortical patch localization	3
BP	actin cytoskeleton organization	306
BP	actin cytoskeleton reorganization	5
BP	actin filament bundle assembly	7
BP	actin filament bundle organization	1
BP	actin filament capping	8
BP	actin filament depolymerization	10
BP	actin filament organization	112
BP	actin filament polymerization	7
BP	actin filament reorganization	5
BP	actin filament reorganization involved in cell cycle	1
BP	actin filament severing	8
BP	actin filament-based movement	6
BP	actin filament-based process	34
BP	actin nucleation	36
BP	actin polymerization or depolymerization	18
BP	activation of GTPase activity	24
BP	activation of immune response	4
BP	activation of protein kinase activity	36
BP	actomyosin contractile ring assembly	12
BP	actomyosin contractile ring contraction	3
BP	actomyosin structure organization	35
BP	acyl-CoA metabolic process	54
BP	acylglycerol metabolic process	4
BP	adenine biosynthetic process	1
BP	adenine nucleotide transport	7
BP	adenosine to inosine editing	8
BP	adenylate cyclase-activating G protein-coupled receptor signaling pathway	16
BP	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	10
BP	adhesion of symbiont to host	14
BP	adhesion of symbiont to host cell	1
BP	aerobic respiration	54
BP	age-dependent response to oxidative stress	2
BP	age-dependent response to reactive oxygen species	1
BP	aggrephagy	8
BP	aggresome assembly	4
BP	aging	154
BP	alcohol catabolic process	9
BP	alcohol metabolic process	96
BP	aldehyde catabolic process	14
BP	alkaloid metabolic process	1
BP	allantoin catabolic process	1
BP	allantoin metabolic process	2
BP	alpha-amino acid metabolic process	61
BP	alpha-ketoglutarate transport	2
BP	amide biosynthetic process	248
BP	amide transport	146
BP	amine biosynthetic process	4
BP	amine metabolic process	20
BP	amino acid import across plasma membrane	6
BP	amino acid transmembrane transport	55
BP	amino acid transport	44
BP	amino-acid betaine metabolic process	1
BP	aminoacyl-tRNA metabolism involved in translational fidelity	4
BP	ammonia assimilation cycle	1
BP	ammonium transmembrane transport	27
BP	ammonium transport	44
BP	anatomical structure development	82
BP	anatomical structure formation involved in morphogenesis	90
BP	anatomical structure morphogenesis	222
BP	animal organ development	2
BP	animal organ morphogenesis	8
BP	anion homeostasis	1
BP	anion transmembrane transport	195
BP	anion transport	224
BP	antibiotic metabolic process	21
BP	antimicrobial humoral response	20
BP	apoptotic mitochondrial changes	5
BP	apoptotic process	60
BP	arginine biosynthetic process	6
BP	arginine catabolic process	5
BP	arginine catabolic process to proline via ornithine	1
BP	arginine metabolic process	9
BP	arginine transmembrane transport	8
BP	arginine transport	8
BP	arginyl-tRNA aminoacylation	3
BP	aromatic amino acid family metabolic process	7
BP	aromatic amino acid transport	1
BP	aromatic compound biosynthetic process	143
BP	aromatic compound catabolic process	92
BP	arsenite transport	1
BP	asparagine biosynthetic process	12
BP	asparagine metabolic process	8
BP	asparaginyl-tRNA aminoacylation	6
BP	aspartate biosynthetic process	2
BP	aspartate family amino acid metabolic process	24
BP	aspartate metabolic process	3
BP	aspartyl-tRNA aminoacylation	1
BP	assembly of large subunit precursor of preribosome	3
BP	attachment of GPI anchor to protein	4
BP	attachment of mitotic spindle microtubules to kinetochore	15
BP	attachment of spindle microtubules to kinetochore	40
BP	autophagosome assembly	42
BP	autophagosome maturation	6
BP	autophagosome organization	21
BP	autophagy	315
BP	autophagy of mitochondrion	63
BP	autophagy of nucleus	8
BP	autophagy of peroxisome	12
BP	azole transmembrane transport	10
BP	barbed-end actin filament capping	12
BP	base conversion or substitution editing	4
BP	base-excision repair	48
BP	base-excision repair, AP site formation	12
BP	base-excision repair, gap-filling	8
BP	basic amino acid transmembrane transport	12
BP	basic amino acid transport	4
BP	biological process involved in interaction with host	13
BP	biological_process	1143
BP	biosynthetic process	406
BP	biotin metabolic process	3
BP	borate transmembrane transport	1
BP	borate transport	1
BP	box C/D RNA 3'-end processing	2
BP	box C/D snoRNP assembly	4
BP	box H/ACA snoRNP assembly	3
BP	branched-chain amino acid biosynthetic process	6
BP	branched-chain amino acid catabolic process	12
BP	cAMP biosynthetic process	10
BP	cAMP metabolic process	4
BP	cAMP-mediated signaling	18
BP	calcium ion export	1
BP	calcium ion homeostasis	24
BP	calcium ion import	10
BP	calcium ion import across plasma membrane	10
BP	calcium ion import into cytosol	2
BP	calcium ion transmembrane import into cytosol	6
BP	calcium ion transmembrane transport	24
BP	calcium ion transport	24
BP	calcium ion transport into cytosol	8
BP	calcium-mediated signaling	16
BP	canonical glycolysis	20
BP	cap-independent translational initiation	1
BP	carbohydrate biosynthetic process	42
BP	carbohydrate catabolic process	26
BP	carbohydrate derivative catabolic process	13
BP	carbohydrate derivative metabolic process	97
BP	carbohydrate derivative transport	11
BP	carbohydrate homeostasis	10
BP	carbohydrate mediated signaling	8
BP	carbohydrate metabolic process	240
BP	carbohydrate phosphorylation	24
BP	carbohydrate transmembrane transport	2
BP	carbohydrate transport	4
BP	carbon catabolite regulation of transcription	10
BP	carboxylic acid catabolic process	29
BP	carboxylic acid metabolic process	387
BP	carboxylic acid transmembrane transport	60
BP	carboxylic acid transport	23
BP	cardiolipin metabolic process	3
BP	carnitine metabolic process	4
BP	catabolic process	446
BP	cation homeostasis	43
BP	cation transmembrane transport	245
BP	cation transport	357
BP	cell adhesion	110
BP	cell aggregation	1
BP	cell aging	110
BP	cell communication	432
BP	cell cycle	133
BP	cell cycle G1/S phase transition	14
BP	cell cycle G2/M phase transition	4
BP	cell cycle phase transition	11
BP	cell death	42
BP	cell development	84
BP	cell differentiation	387
BP	cell division	210
BP	cell fate commitment	18
BP	cell junction assembly	1
BP	cell maturation	4
BP	cell morphogenesis	30
BP	cell motility	9
BP	cell projection assembly	5
BP	cell projection organization	4
BP	cell redox homeostasis	80
BP	cell surface receptor signaling pathway	64
BP	cell wall mannoprotein biosynthetic process	4
BP	cell-cell adhesion	20
BP	cell-matrix adhesion	10
BP	cell-substrate adhesion	45
BP	cellular aldehyde metabolic process	108
BP	cellular amide catabolic process	9
BP	cellular amide metabolic process	149
BP	cellular amino acid biosynthetic process	42
BP	cellular amino acid catabolic process	45
BP	cellular amino acid metabolic process	602
BP	cellular aromatic compound metabolic process	395
BP	cellular biogenic amine metabolic process	10
BP	cellular calcium ion homeostasis	36
BP	cellular carbohydrate catabolic process	4
BP	cellular carbohydrate metabolic process	76
BP	cellular cation homeostasis	80
BP	cellular chemical homeostasis	47
BP	cellular component assembly	199
BP	cellular component maintenance	7
BP	cellular copper ion homeostasis	30
BP	cellular detoxification	52
BP	cellular detoxification of aldehyde	9
BP	cellular detoxification of cadmium ion	1
BP	cellular detoxification of methylglyoxal	2
BP	cellular glucose homeostasis	35
BP	cellular homeostasis	354
BP	cellular hyperosmotic response	8
BP	cellular hyperosmotic salinity response	4
BP	cellular hypotonic response	10
BP	cellular ion homeostasis	86
BP	cellular iron ion homeostasis	98
BP	cellular ketone metabolic process	11
BP	cellular lipid catabolic process	22
BP	cellular lipid metabolic process	280
BP	cellular localization	220
BP	cellular macromolecule biosynthetic process	484
BP	cellular macromolecule catabolic process	114
BP	cellular manganese ion homeostasis	1
BP	cellular metabolic process	829
BP	cellular metal ion homeostasis	75
BP	cellular modified amino acid catabolic process	4
BP	cellular modified amino acid metabolic process	25
BP	cellular oxidant detoxification	68
BP	cellular polysaccharide biosynthetic process	28
BP	cellular potassium ion homeostasis	12
BP	cellular process	2088
BP	cellular protein catabolic process	415
BP	cellular protein localization	1044
BP	cellular protein metabolic process	1665
BP	cellular protein modification process	1218
BP	cellular protein-containing complex assembly	952
BP	cellular protein-containing complex localization	27
BP	cellular respiration	136
BP	cellular response to DNA damage stimulus	840
BP	cellular response to UV	54
BP	cellular response to acidic pH	4
BP	cellular response to alkaline pH	8
BP	cellular response to amino acid starvation	30
BP	cellular response to amino acid stimulus	5
BP	cellular response to antibiotic	36
BP	cellular response to cadmium ion	5
BP	cellular response to calcium ion	7
BP	cellular response to carbohydrate stimulus	6
BP	cellular response to cold	10
BP	cellular response to copper ion	12
BP	cellular response to cytokine stimulus	36
BP	cellular response to decreased oxygen levels	6
BP	cellular response to extracellular stimulus	168
BP	cellular response to fatty acid	4
BP	cellular response to glucose starvation	25
BP	cellular response to glucose stimulus	30
BP	cellular response to heat	126
BP	cellular response to hormone stimulus	21
BP	cellular response to hydrogen peroxide	25
BP	cellular response to hyperoxia	6
BP	cellular response to hypoxia	48
BP	cellular response to increased oxygen levels	4
BP	cellular response to inorganic substance	16
BP	cellular response to insulin stimulus	8
BP	cellular response to interleukin-12	6
BP	cellular response to iron ion starvation	1
BP	cellular response to light stimulus	40
BP	cellular response to lipid	28
BP	cellular response to lithium ion	3
BP	cellular response to magnesium ion	4
BP	cellular response to mechanical stimulus	6
BP	cellular response to menadione	1
BP	cellular response to metal ion	7
BP	cellular response to methylglyoxal	3
BP	cellular response to misfolded protein	24
BP	cellular response to nitrogen starvation	6
BP	cellular response to nutrient	33
BP	cellular response to nutrient levels	160
BP	cellular response to oleic acid	2
BP	cellular response to organic cyclic compound	6
BP	cellular response to organic substance	183
BP	cellular response to organonitrogen compound	4
BP	cellular response to osmotic stress	100
BP	cellular response to oxidative stress	370
BP	cellular response to oxygen levels	16
BP	cellular response to pH	48
BP	cellular response to peptide	1
BP	cellular response to peptide hormone stimulus	4
BP	cellular response to pheromone	15
BP	cellular response to radiation	20
BP	cellular response to reactive oxygen species	88
BP	cellular response to salt stress	8
BP	cellular response to starvation	210
BP	cellular response to steroid hormone stimulus	12
BP	cellular response to stress	198
BP	cellular response to superoxide	8
BP	cellular response to topologically incorrect protein	12
BP	cellular response to toxic substance	112
BP	cellular response to unfolded protein	42
BP	cellular response to water deprivation	1
BP	cellular zinc ion homeostasis	6
BP	centromere complex assembly	8
BP	centrosome cycle	6
BP	ceramide biosynthetic process	12
BP	ceramide metabolic process	21
BP	ceramide transport	4
BP	chaperone cofactor-dependent protein refolding	5
BP	chaperone-mediated protein complex assembly	18
BP	chaperone-mediated protein folding	78
BP	chemical homeostasis	54
BP	chitin catabolic process	6
BP	chitin metabolic process	8
BP	chloride transmembrane transport	28
BP	chloride transport	28
BP	chromatin assembly	72
BP	chromatin assembly or disassembly	78
BP	chromatin organization	651
BP	chromatin remodeling	306
BP	chromatin-mediated maintenance of transcription	10
BP	chromosome condensation	20
BP	chromosome localization to nuclear envelope involved in homologous chromosome segregation	1
BP	chromosome organization	544
BP	chromosome organization involved in meiotic cell cycle	15
BP	chromosome segregation	224
BP	chromosome separation	4
BP	chylomicron assembly	15
BP	circadian regulation of gene expression	5
BP	circadian rhythm	7
BP	cis assembly of pre-catalytic spliceosome	1
BP	citrate metabolic process	12
BP	citrate transport	4
BP	clathrin-dependent endocytosis	6
BP	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2
BP	cleavage involved in rRNA processing	46
BP	coenzyme A biosynthetic process	6
BP	coenzyme A metabolic process	8
BP	copper ion export	12
BP	copper ion homeostasis	20
BP	copper ion import	3
BP	copper ion transmembrane transport	4
BP	copper ion transport	35
BP	cortical actin cytoskeleton organization	102
BP	cortical cytoskeleton organization	51
BP	cotranslational protein targeting to membrane	36
BP	cyclic purine nucleotide metabolic process	2
BP	cyclic-nucleotide-mediated signaling	3
BP	cysteine biosynthetic process	9
BP	cysteine biosynthetic process from serine	2
BP	cysteine biosynthetic process via cystathionine	3
BP	cysteine metabolic process	15
BP	cysteine transport	1
BP	cysteinyl-tRNA aminoacylation	2
BP	cytidine deamination	3
BP	cytochrome c-heme linkage	2
BP	cytochrome complex assembly	7
BP	cytokine-mediated signaling pathway	42
BP	cytokinetic process	32
BP	cytoplasm protein quality control by the ubiquitin-proteasome system	3
BP	cytoplasmic microtubule organization	10
BP	cytoplasmic sequestering of protein	6
BP	cytoplasmic sequestering of transcription factor	6
BP	cytoplasmic translation	213
BP	cytoplasmic translational elongation	5
BP	cytoplasmic translational initiation	12
BP	cytoplasmic translational termination	2
BP	cytoskeleton organization	357
BP	cytoskeleton-dependent cytokinesis	120
BP	cytoskeleton-dependent intracellular transport	18
BP	cytosolic calcium ion transport	6
BP	cytosolic transport	10
BP	dITP catabolic process	1
BP	dTDP biosynthetic process	1
BP	dTTP biosynthetic process	4
BP	dUDP biosynthetic process	1
BP	dUMP biosynthetic process	2
BP	dUTP catabolic process	1
BP	deactivation of mitotic spindle assembly checkpoint	4
BP	deadenylation-dependent decapping of nuclear-transcribed mRNA	9
BP	deadenylation-independent decapping of nuclear-transcribed mRNA	4
BP	demethylation	6
BP	deoxycytidine metabolic process	1
BP	deoxyribonucleoside catabolic process	1
BP	deoxyribonucleoside monophosphate biosynthetic process	1
BP	deoxyribonucleoside triphosphate catabolic process	1
BP	deoxyribonucleoside triphosphate metabolic process	4
BP	deoxyribonucleotide biosynthetic process	8
BP	deoxyribonucleotide catabolic process	2
BP	deoxyribose phosphate catabolic process	1
BP	dephosphorylation	132
BP	dephosphorylation of RNA polymerase II C-terminal domain	9
BP	detection of oxidative stress	4
BP	detoxification of cadmium ion	1
BP	developmental maturation	1
BP	developmental process	355
BP	developmental process involved in reproduction	60
BP	diacylglycerol metabolic process	6
BP	dicarboxylic acid catabolic process	2
BP	dicarboxylic acid metabolic process	34
BP	dicarboxylic acid transport	4
BP	dihydrofolate metabolic process	3
BP	dipeptide import across plasma membrane	6
BP	dipeptide transport	2
BP	disaccharide metabolic process	4
BP	divalent inorganic cation homeostasis	5
BP	division septum assembly	4
BP	double-strand break repair	200
BP	double-strand break repair involved in meiotic recombination	3
BP	double-strand break repair via break-induced replication	6
BP	double-strand break repair via classical nonhomologous end joining	3
BP	double-strand break repair via homologous recombination	119
BP	double-strand break repair via nonhomologous end joining	48
BP	double-strand break repair via single-strand annealing	1
BP	double-strand break repair via synthesis-dependent strand annealing	2
BP	dynamin family protein polymerization involved in mitochondrial fission	2
BP	early endosome to Golgi transport	4
BP	electron transport chain	40
BP	endocytic recycling	21
BP	endocytosis	256
BP	endomembrane system organization	13
BP	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21
BP	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	33
BP	endonucleolytic cleavage involved in tRNA processing	2
BP	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	14
BP	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2
BP	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	18
BP	endoplasmic reticulum localization	2
BP	endoplasmic reticulum membrane organization	20
BP	endoplasmic reticulum organization	30
BP	endoplasmic reticulum to Golgi vesicle-mediated transport	160
BP	endoplasmic reticulum tubular network maintenance	1
BP	endoplasmic reticulum tubular network membrane organization	6
BP	endoplasmic reticulum tubular network organization	6
BP	endoplasmic reticulum unfolded protein response	42
BP	endoplasmic reticulum-plasma membrane tethering	3
BP	endosomal transport	161
BP	endosomal vesicle fusion	3
BP	endosome organization	24
BP	endosome transport via multivesicular body sorting pathway	27
BP	energy derivation by oxidation of organic compounds	52
BP	energy reserve metabolic process	36
BP	entrainment of circadian clock	4
BP	entrainment of circadian clock by photoperiod	3
BP	enzyme linked receptor protein signaling pathway	3
BP	enzyme-directed rRNA pseudouridine synthesis	2
BP	epithelial cell differentiation	7
BP	epithelial tube morphogenesis	1
BP	epithelium development	4
BP	error-free postreplication DNA repair	1
BP	error-free translesion synthesis	9
BP	error-prone translesion synthesis	9
BP	establishment of cell polarity	112
BP	establishment of chromosome localization	12
BP	establishment of localization in cell	656
BP	establishment of mitochondrion localization	6
BP	establishment of mitotic sister chromatid cohesion	2
BP	establishment of mitotic spindle localization	12
BP	establishment of mitotic spindle orientation	12
BP	establishment of organelle localization	78
BP	establishment of protein localization	858
BP	establishment of protein localization to endoplasmic reticulum	12
BP	establishment of protein localization to membrane	78
BP	establishment of protein localization to mitochondrial membrane	4
BP	establishment of protein localization to mitochondrion	42
BP	establishment of protein localization to organelle	204
BP	establishment of protein localization to peroxisome	2
BP	establishment of protein localization to plasma membrane	18
BP	establishment of protein localization to vacuole	16
BP	establishment of protein-containing complex localization to telomere	1
BP	establishment of sister chromatid cohesion	2
BP	establishment of spindle localization	9
BP	establishment of spindle orientation	10
BP	establishment of vesicle localization	15
BP	establishment or maintenance of actin cytoskeleton polarity	12
BP	establishment or maintenance of cell polarity	238
BP	establishment or maintenance of cell polarity regulating cell shape	14
BP	ethanol catabolic process	14
BP	eukaryotic translation initiation factor 2 complex assembly	1
BP	exit from mitosis	4
BP	exocytosis	35
BP	exonucleolytic catabolism of deadenylated mRNA	20
BP	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	8
BP	export across plasma membrane	9
BP	extracellular structure organization	5
BP	farnesyl diphosphate biosynthetic process	6
BP	farnesyl diphosphate biosynthetic process, mevalonate pathway	2
BP	farnesyl diphosphate metabolic process	4
BP	fat cell differentiation	8
BP	fatty acid beta-oxidation	54
BP	fatty acid biosynthetic process	40
BP	fatty acid catabolic process	48
BP	fatty acid elongation	3
BP	fatty acid metabolic process	120
BP	fatty acid oxidation	30
BP	fatty acid transport	15
BP	folic acid-containing compound biosynthetic process	2
BP	folic acid-containing compound metabolic process	4
BP	formaldehyde catabolic process	2
BP	formate metabolic process	2
BP	formation of cytoplasmic translation initiation complex	12
BP	formation of structure involved in a symbiotic process	1
BP	formation of translation preinitiation complex	9
BP	free ubiquitin chain polymerization	4
BP	fructose 1,6-bisphosphate metabolic process	6
BP	fructose 2,6-bisphosphate metabolic process	2
BP	fructose 6-phosphate metabolic process	15
BP	fructose import across plasma membrane	1
BP	fructose metabolic process	4
BP	fructose transmembrane transport	4
BP	galactose catabolic process	6
BP	galactose catabolic process via UDP-galactose	1
BP	galactose metabolic process	15
BP	galactose transmembrane transport	2
BP	gamma-aminobutyric acid catabolic process	4
BP	gamma-aminobutyric acid metabolic process	2
BP	gamma-tubulin complex localization	1
BP	gene conversion	5
BP	gene expression	936
BP	gene silencing	212
BP	gene silencing by RNA	12
BP	generation of catalytic spliceosome for first transesterification step	2
BP	generation of catalytic spliceosome for second transesterification step	4
BP	generation of neurons	5
BP	generation of precursor metabolites and energy	259
BP	genitalia development	3
BP	genitalia morphogenesis	2
BP	gland development	2
BP	global genome nucleotide-excision repair	4
BP	gluconeogenesis	18
BP	glucose 1-phosphate metabolic process	1
BP	glucose 6-phosphate metabolic process	24
BP	glucose catabolic process	12
BP	glucose homeostasis	35
BP	glucose import	6
BP	glucose import across plasma membrane	3
BP	glucose mediated signaling pathway	8
BP	glucose metabolic process	80
BP	glucose transmembrane transport	12
BP	glucosylceramide biosynthetic process	3
BP	glutamate biosynthetic process	12
BP	glutamate catabolic process	3
BP	glutamate metabolic process	50
BP	glutamine catabolic process	4
BP	glutamine family amino acid metabolic process	15
BP	glutamine metabolic process	8
BP	glutaminyl-tRNA aminoacylation	2
BP	glutaminyl-tRNAGln biosynthesis via transamidation	4
BP	glutathione biosynthetic process	6
BP	glutathione catabolic process	4
BP	glutathione metabolic process	66
BP	glutathione transport	2
BP	glyceraldehyde-3-phosphate biosynthetic process	2
BP	glyceraldehyde-3-phosphate metabolic process	6
BP	glycerol catabolic process	2
BP	glycerol metabolic process	10
BP	glycerol-3-phosphate biosynthetic process	2
BP	glycerol-3-phosphate metabolic process	3
BP	glycerolipid metabolic process	48
BP	glycerophospholipid biosynthetic process	40
BP	glycerophospholipid catabolic process	12
BP	glycerophospholipid metabolic process	42
BP	glycine biosynthetic process	1
BP	glycine biosynthetic process, by transamination of glyoxylate	2
BP	glycine catabolic process	2
BP	glycine decarboxylation via glycine cleavage system	2
BP	glycine metabolic process	15
BP	glycogen biosynthetic process	12
BP	glycogen metabolic process	36
BP	glycolipid biosynthetic process	25
BP	glycolipid metabolic process	24
BP	glycolytic process	35
BP	glycolytic process through fructose-6-phosphate	4
BP	glycolytic process through glucose-6-phosphate	4
BP	glycoprotein biosynthetic process	80
BP	glycoprotein catabolic process	30
BP	glycoprotein metabolic process	110
BP	glycosphingolipid biosynthetic process	5
BP	glycosphingolipid metabolic process	12
BP	glycosylation	45
BP	glycosylceramide metabolic process	1
BP	glyoxylate cycle	2
BP	glyoxylate metabolic process	6
BP	guanosine metabolic process	1
BP	heme biosynthetic process	32
BP	heme catabolic process	4
BP	heme metabolic process	20
BP	heme oxidation	2
BP	heme transport	16
BP	heterochromatin assembly	16
BP	heterochromatin assembly by small RNA	1
BP	heterochromatin organization	28
BP	heterocycle metabolic process	798
BP	hexose biosynthetic process	6
BP	hexose metabolic process	13
BP	hexose transmembrane transport	2
BP	histidine biosynthetic process	4
BP	histidine metabolic process	4
BP	histidine transport	2
BP	histone H2A acetylation	4
BP	histone H2A phosphorylation	1
BP	histone H2B conserved C-terminal lysine ubiquitination	2
BP	histone H2B ubiquitination	8
BP	histone H3 acetylation	15
BP	histone H3-K14 acetylation	4
BP	histone H3-K36 demethylation	4
BP	histone H3-K4 methylation	10
BP	histone H3-K4 trimethylation	5
BP	histone H3-K79 methylation	3
BP	histone H4 acetylation	30
BP	histone H4-K12 acetylation	3
BP	histone H4-K5 acetylation	2
BP	histone H4-K8 acetylation	2
BP	histone acetylation	80
BP	histone arginine methylation	3
BP	histone deacetylation	42
BP	histone demethylation	2
BP	histone exchange	36
BP	histone glutamine methylation	2
BP	histone lysine demethylation	1
BP	histone lysine methylation	18
BP	histone mRNA catabolic process	3
BP	histone mRNA metabolic process	1
BP	histone methylation	32
BP	histone modification	120
BP	histone monoubiquitination	4
BP	histone phosphorylation	12
BP	histone ubiquitination	16
BP	histone-serine phosphorylation	2
BP	homeostatic process	332
BP	homocysteine metabolic process	6
BP	homologous chromosome segregation	12
BP	homologous recombination	11
BP	humoral immune response	28
BP	hydrogen peroxide catabolic process	24
BP	hydrogen peroxide metabolic process	10
BP	hyperosmotic response	12
BP	hyperosmotic salinity response	2
BP	hypotonic response	4
BP	immune response	36
BP	immune system process	18
BP	import across plasma membrane	24
BP	import into cell	80
BP	import into nucleus	56
BP	indolalkylamine biosynthetic process	2
BP	inner mitochondrial membrane organization	24
BP	inorganic anion transport	28
BP	inorganic cation import across plasma membrane	6
BP	inorganic cation transmembrane transport	144
BP	inosine catabolic process	1
BP	inositol biosynthetic process	2
BP	inositol lipid-mediated signaling	12
BP	inositol metabolic process	8
BP	inositol phosphate biosynthetic process	4
BP	inositol phosphate metabolic process	6
BP	inositol phosphorylation	2
BP	insulin receptor signaling pathway	8
BP	interleukin-12-mediated signaling pathway	18
BP	interleukin-23-mediated signaling pathway	10
BP	intermembrane lipid transfer	8
BP	internal peptidyl-lysine acetylation	40
BP	internal protein amino acid acetylation	40
BP	interstrand cross-link repair	18
BP	intra-Golgi vesicle-mediated transport	36
BP	intracellular lipid transport	3
BP	intracellular mRNA localization	16
BP	intracellular pH reduction	39
BP	intracellular protein transmembrane transport	84
BP	intracellular protein transport	889
BP	intracellular signal transduction	392
BP	intracellular sterol transport	4
BP	intracellular transport	1064
BP	intralumenal vesicle formation	2
BP	ion homeostasis	141
BP	ion transmembrane transport	420
BP	ion transport	516
BP	iron import into cell	12
BP	iron import into the mitochondrion	2
BP	iron ion homeostasis	135
BP	iron ion import across plasma membrane	2
BP	iron ion transmembrane transport	20
BP	iron ion transport	24
BP	iron-sulfur cluster assembly	42
BP	isoleucine biosynthetic process	4
BP	isoleucine catabolic process	4
BP	isoleucyl-tRNA aminoacylation	2
BP	isopentenyl diphosphate biosynthetic process	3
BP	isopentenyl diphosphate biosynthetic process, mevalonate pathway	4
BP	isopentenyl diphosphate metabolic process	3
BP	isoprenoid biosynthetic process	12
BP	isoprenoid metabolic process	5
BP	ketone catabolic process	4
BP	kinetochore assembly	10
BP	kinetochore organization	8
BP	kynurenic acid biosynthetic process	1
BP	kynurenine metabolic process	6
BP	lactate biosynthetic process	2
BP	lactate catabolic process	4
BP	lactate metabolic process	7
BP	lactate oxidation	1
BP	lactate transmembrane transport	2
BP	lactate transport	1
BP	lagging strand elongation	24
BP	late endosome to vacuole transport	26
BP	late endosome to vacuole transport via multivesicular body sorting pathway	9
BP	late nucleophagy	4
BP	lateral attachment of mitotic spindle microtubules to kinetochore	1
BP	leading strand elongation	10
BP	leucine biosynthetic process	3
BP	leucine catabolic process	6
BP	leucyl-tRNA aminoacylation	2
BP	lipid biosynthetic process	258
BP	lipid catabolic process	60
BP	lipid droplet formation	3
BP	lipid droplet organization	5
BP	lipid homeostasis	28
BP	lipid localization	38
BP	lipid metabolic process	600
BP	lipid modification	26
BP	lipid oxidation	12
BP	lipid phosphorylation	25
BP	lipid storage	10
BP	lipid translocation	6
BP	lipid transport	85
BP	lipoate biosynthetic process	2
BP	lipoate metabolic process	1
BP	lipoprotein biosynthetic process	12
BP	lipoprotein catabolic process	3
BP	lipoprotein metabolic process	21
BP	localization within membrane	6
BP	locomotion	6
BP	long-chain fatty acid biosynthetic process	4
BP	long-chain fatty acid import into cell	4
BP	long-chain fatty acid metabolic process	10
BP	long-chain fatty acid transport	12
BP	long-chain fatty-acyl-CoA metabolic process	3
BP	lysine biosynthetic process via aminoadipic acid	1
BP	lysine transport	1
BP	mRNA 3'-end processing	30
BP	mRNA 3'-splice site recognition	3
BP	mRNA 5'-splice site recognition	12
BP	mRNA branch site recognition	1
BP	mRNA catabolic process	120
BP	mRNA cis splicing, via spliceosome	48
BP	mRNA cleavage	24
BP	mRNA cleavage involved in mRNA processing	6
BP	mRNA destabilization	6
BP	mRNA export from nucleus	144
BP	mRNA export from nucleus in response to heat stress	4
BP	mRNA metabolic process	165
BP	mRNA polyadenylation	48
BP	mRNA processing	259
BP	mRNA splice site selection	36
BP	mRNA splicing, via spliceosome	225
BP	mRNA transcription	2
BP	mRNA transcription by RNA polymerase II	4
BP	mRNA transport	90
BP	macroautophagy	126
BP	macromolecule depalmitoylation	2
BP	macromolecule glycosylation	15
BP	macromolecule localization	203
BP	macromolecule metabolic process	599
BP	maintenance of DNA repeat elements	10
BP	maintenance of ER location	1
BP	maintenance of Golgi location	2
BP	maintenance of cell polarity	12
BP	maintenance of location in cell	12
BP	maintenance of protein localization in endoplasmic reticulum	6
BP	maintenance of protein location	22
BP	maintenance of protein location in cell	40
BP	maintenance of protein location in nucleus	7
BP	maintenance of rDNA	2
BP	maintenance of translational fidelity	6
BP	male genitalia development	4
BP	male genitalia morphogenesis	1
BP	male sex differentiation	3
BP	mammary gland development	6
BP	mammary gland epithelial cell differentiation	5
BP	mammary gland epithelium development	3
BP	manganese ion homeostasis	1
BP	manganese ion transmembrane transport	16
BP	manganese ion transport	16
BP	mannose trimming involved in glycoprotein ERAD pathway	15
BP	mannosylation	12
BP	maturation of 5.8S rRNA	81
BP	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	52
BP	maturation of 5S rRNA	2
BP	maturation of LSU-rRNA	16
BP	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	39
BP	maturation of SSU-rRNA	99
BP	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	124
BP	mature ribosome assembly	9
BP	medium-chain fatty acid biosynthetic process	2
BP	medium-chain fatty acid catabolic process	2
BP	medium-chain fatty acid metabolic process	1
BP	meiosis I	57
BP	meiotic DNA double-strand break formation	2
BP	meiotic DNA double-strand break processing	1
BP	meiotic cell cycle	396
BP	meiotic cell cycle checkpoint signaling	2
BP	meiotic chromosome segregation	27
BP	meiotic chromosome separation	2
BP	meiotic gene conversion	2
BP	meiotic joint molecule formation	1
BP	meiotic mismatch repair	6
BP	meiotic nuclear division	22
BP	meiotic recombination checkpoint signaling	6
BP	meiotic sister chromatid cohesion	6
BP	meiotic sister chromatid cohesion, centromeric	6
BP	meiotic telomere clustering	2
BP	membrane assembly	12
BP	membrane biogenesis	8
BP	membrane docking	11
BP	membrane fission	6
BP	membrane fusion	147
BP	membrane lipid metabolic process	57
BP	membrane organization	336
BP	membrane raft assembly	6
BP	membrane raft distribution	2
BP	membrane raft localization	1
BP	membrane raft organization	12
BP	membrane raft polarization	2
BP	membrane tubulation	3
BP	metabolic process	868
BP	metal ion homeostasis	56
BP	metal ion transport	84
BP	metaphase plate congression	20
BP	methionine biosynthetic process	52
BP	methionine metabolic process	75
BP	methionine transport	1
BP	methionyl-tRNA aminoacylation	2
BP	methylation	175
BP	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2
BP	methylglyoxal catabolic process to lactate	4
BP	methylglyoxal metabolic process	8
BP	microtubule anchoring	5
BP	microtubule anchoring at microtubule organizing center	2
BP	microtubule bundle formation	6
BP	microtubule cytoskeleton organization	136
BP	microtubule cytoskeleton organization involved in mitosis	20
BP	microtubule depolymerization	8
BP	microtubule nucleation	10
BP	microtubule organizing center localization	3
BP	microtubule organizing center organization	9
BP	microtubule polymerization	24
BP	microtubule polymerization or depolymerization	5
BP	microtubule-based movement	30
BP	microtubule-based process	133
BP	microtubule-based transport	5
BP	mismatch repair	80
BP	mitochondria-nucleus signaling pathway	4
BP	mitochondrial ADP transmembrane transport	6
BP	mitochondrial ATP synthesis coupled electron transport	16
BP	mitochondrial ATP synthesis coupled proton transport	8
BP	mitochondrial ATP transmembrane transport	6
BP	mitochondrial DNA metabolic process	18
BP	mitochondrial DNA repair	24
BP	mitochondrial DNA replication	12
BP	mitochondrial RNA 3'-end processing	4
BP	mitochondrial RNA catabolic process	1
BP	mitochondrial RNA metabolic process	12
BP	mitochondrial RNA processing	10
BP	mitochondrial asparaginyl-tRNA aminoacylation	2
BP	mitochondrial citrate transmembrane transport	1
BP	mitochondrial cytochrome c oxidase assembly	25
BP	mitochondrial double-strand break repair via homologous recombination	1
BP	mitochondrial electron transport, NADH to ubiquinone	10
BP	mitochondrial electron transport, succinate to ubiquinone	2
BP	mitochondrial fission	30
BP	mitochondrial fusion	7
BP	mitochondrial genome maintenance	102
BP	mitochondrial membrane fission	2
BP	mitochondrial membrane fusion	1
BP	mitochondrial membrane organization	36
BP	mitochondrial phosphate ion transmembrane transport	1
BP	mitochondrial protein catabolic process	6
BP	mitochondrial protein processing	8
BP	mitochondrial proton-transporting ATP synthase complex assembly	4
BP	mitochondrial pyruvate transmembrane transport	1
BP	mitochondrial respirasome assembly	2
BP	mitochondrial respiratory chain complex III assembly	3
BP	mitochondrial respiratory chain complex assembly	28
BP	mitochondrial tRNA 3'-end processing	2
BP	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2
BP	mitochondrial tRNA modification	4
BP	mitochondrial tRNA processing	6
BP	mitochondrial tRNA wobble uridine modification	1
BP	mitochondrial translation	174
BP	mitochondrial translational elongation	3
BP	mitochondrial translational termination	6
BP	mitochondrial transmembrane transport	81
BP	mitochondrial transport	192
BP	mitochondrial tryptophanyl-tRNA aminoacylation	1
BP	mitochondrial tyrosyl-tRNA aminoacylation	2
BP	mitochondrion distribution	40
BP	mitochondrion localization	60
BP	mitochondrion organization	497
BP	mitochondrion-endoplasmic reticulum membrane tethering	6
BP	mitotic DNA damage checkpoint signaling	8
BP	mitotic DNA integrity checkpoint signaling	11
BP	mitotic DNA replication	26
BP	mitotic DNA replication checkpoint signaling	20
BP	mitotic DNA replication initiation	6
BP	mitotic DNA replication preinitiation complex assembly	1
BP	mitotic G1 DNA damage checkpoint signaling	8
BP	mitotic G1/S transition checkpoint signaling	4
BP	mitotic G2 DNA damage checkpoint signaling	12
BP	mitotic G2/M transition checkpoint	10
BP	mitotic cell cycle	602
BP	mitotic cell cycle checkpoint signaling	66
BP	mitotic cell cycle phase transition	22
BP	mitotic chromosome condensation	32
BP	mitotic chromosome movement towards spindle pole	4
BP	mitotic cytokinesis	184
BP	mitotic cytokinesis checkpoint signaling	3
BP	mitotic cytokinetic process	20
BP	mitotic intra-S DNA damage checkpoint signaling	30
BP	mitotic metaphase plate congression	15
BP	mitotic nuclear division	46
BP	mitotic recombination	27
BP	mitotic recombination-dependent replication fork processing	2
BP	mitotic sister chromatid biorientation	3
BP	mitotic sister chromatid cohesion	45
BP	mitotic sister chromatid segregation	132
BP	mitotic sister chromatid separation	3
BP	mitotic spindle assembly	20
BP	mitotic spindle assembly checkpoint signaling	63
BP	mitotic spindle disassembly	2
BP	mitotic spindle elongation	3
BP	mitotic spindle organization	64
BP	modification-dependent protein catabolic process	177
BP	modulation of process of other organism	9
BP	monocarboxylic acid metabolic process	94
BP	monocarboxylic acid transport	65
BP	monopolar spindle attachment to meiosis I kinetochore	2
BP	monosaccharide metabolic process	18
BP	morphogenesis of an epithelium	5
BP	multicellular organism development	12
BP	multivesicular body assembly	4
BP	multivesicular body organization	1
BP	multivesicular body sorting pathway	30
BP	ncRNA processing	222
BP	ncRNA transcription	17
BP	negative regulation of ATP biosynthetic process	2
BP	negative regulation of ATP metabolic process	2
BP	negative regulation of ATPase activity	5
BP	negative regulation of Arp2/3 complex-mediated actin nucleation	10
BP	negative regulation of DNA binding	6
BP	negative regulation of DNA biosynthetic process	6
BP	negative regulation of DNA duplex unwinding	1
BP	negative regulation of DNA helicase activity	2
BP	negative regulation of DNA metabolic process	11
BP	negative regulation of DNA recombination	12
BP	negative regulation of DNA recombination at telomere	1
BP	negative regulation of DNA repair	1
BP	negative regulation of DNA replication	30
BP	negative regulation of DNA-binding transcription factor activity	18
BP	negative regulation of DNA-dependent DNA replication	6
BP	negative regulation of DNA-templated transcription, elongation	2
BP	negative regulation of G protein-coupled receptor signaling pathway	10
BP	negative regulation of G1/S transition of mitotic cell cycle	14
BP	negative regulation of G2/M transition of mitotic cell cycle	40
BP	negative regulation of MAP kinase activity	5
BP	negative regulation of MAPK cascade	6
BP	negative regulation of Notch signaling pathway	6
BP	negative regulation of RNA biosynthetic process	160
BP	negative regulation of Ras protein signal transduction	24
BP	negative regulation of SREBP signaling pathway	2
BP	negative regulation of TOR signaling	18
BP	negative regulation of TORC1 signaling	8
BP	negative regulation of actin filament bundle assembly	3
BP	negative regulation of actin filament depolymerization	6
BP	negative regulation of actin filament polymerization	15
BP	negative regulation of actin nucleation	4
BP	negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway	2
BP	negative regulation of amino acid transport	1
BP	negative regulation of apoptotic process	32
BP	negative regulation of autophagy	16
BP	negative regulation of barbed-end actin filament capping	3
BP	negative regulation of binding	4
BP	negative regulation of biosynthetic process	196
BP	negative regulation of cAMP-mediated signaling	5
BP	negative regulation of calcium-independent cell-cell adhesion	1
BP	negative regulation of catabolic process	4
BP	negative regulation of catalytic activity	64
BP	negative regulation of cell adhesion	14
BP	negative regulation of cell cycle	266
BP	negative regulation of cell cycle G1/S phase transition	8
BP	negative regulation of cell cycle G2/M phase transition	16
BP	negative regulation of cell cycle phase transition	20
BP	negative regulation of cell cycle process	31
BP	negative regulation of cell death	28
BP	negative regulation of cell development	1
BP	negative regulation of cell differentiation	7
BP	negative regulation of cell division	3
BP	negative regulation of cell growth	32
BP	negative regulation of cell population proliferation	8
BP	negative regulation of cell-cell adhesion	10
BP	negative regulation of cellular biosynthetic process	98
BP	negative regulation of cellular metabolic process	113
BP	negative regulation of cellular protein catabolic process	2
BP	negative regulation of cellular protein localization	4
BP	negative regulation of cellular protein metabolic process	112
BP	negative regulation of cellular response to heat	5
BP	negative regulation of chromosome condensation	1
BP	negative regulation of chromosome organization	29
BP	negative regulation of cyclin-dependent protein kinase activity	1
BP	negative regulation of cyclin-dependent protein serine/threonine kinase activity	5
BP	negative regulation of cytokinesis	3
BP	negative regulation of cytoplasmic translation	9
BP	negative regulation of cytoskeleton organization	9
BP	negative regulation of dephosphorylation	4
BP	negative regulation of double-strand break repair	3
BP	negative regulation of double-strand break repair via nonhomologous end joining	3
BP	negative regulation of endocytosis	6
BP	negative regulation of endoplasmic reticulum unfolded protein response	2
BP	negative regulation of establishment of protein localization	1
BP	negative regulation of exit from mitosis	4
BP	negative regulation of fatty acid biosynthetic process	5
BP	negative regulation of fatty acid metabolic process	3
BP	negative regulation of fatty acid transport	1
BP	negative regulation of gene expression	816
BP	negative regulation of gene expression, epigenetic	357
BP	negative regulation of gluconeogenesis	18
BP	negative regulation of glycogen biosynthetic process	3
BP	negative regulation of glycolytic process	5
BP	negative regulation of growth	21
BP	negative regulation of helicase activity	2
BP	negative regulation of histone H3-K14 acetylation	3
BP	negative regulation of histone H3-K36 methylation	1
BP	negative regulation of histone H3-K4 methylation	4
BP	negative regulation of histone H3-K9 acetylation	1
BP	negative regulation of histone H3-K9 methylation	4
BP	negative regulation of histone acetylation	15
BP	negative regulation of histone methylation	2
BP	negative regulation of hydrolase activity	20
BP	negative regulation of intracellular protein transport	1
BP	negative regulation of intracellular signal transduction	27
BP	negative regulation of intracellular transport	2
BP	negative regulation of ion transmembrane transport	2
BP	negative regulation of ion transport	4
BP	negative regulation of kinase activity	28
BP	negative regulation of lipid biosynthetic process	4
BP	negative regulation of lipid metabolic process	2
BP	negative regulation of lipid transport	2
BP	negative regulation of long-chain fatty acid import across plasma membrane	2
BP	negative regulation of meiotic cell cycle	15
BP	negative regulation of meiotic nuclear division	12
BP	negative regulation of microtubule depolymerization	14
BP	negative regulation of microtubule polymerization	4
BP	negative regulation of microtubule polymerization or depolymerization	6
BP	negative regulation of mitotic cell cycle	174
BP	negative regulation of mitotic cell cycle DNA replication	2
BP	negative regulation of mitotic cell cycle phase transition	60
BP	negative regulation of mitotic metaphase/anaphase transition	26
BP	negative regulation of mitotic nuclear division	68
BP	negative regulation of mitotic recombination	2
BP	negative regulation of mitotic sister chromatid separation	13
BP	negative regulation of nucleic acid-templated transcription	160
BP	negative regulation of nucleotide metabolic process	1
BP	negative regulation of peptidyl-lysine acetylation	9
BP	negative regulation of peptidyl-tyrosine phosphorylation	5
BP	negative regulation of phagocytosis	7
BP	negative regulation of phosphatase activity	16
BP	negative regulation of phospholipid biosynthetic process	3
BP	negative regulation of phosphoprotein phosphatase activity	20
BP	negative regulation of phosphorylation	60
BP	negative regulation of programmed cell death	24
BP	negative regulation of proteasomal protein catabolic process	5
BP	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	6
BP	negative regulation of protein acetylation	9
BP	negative regulation of protein binding	7
BP	negative regulation of protein catabolic process	6
BP	negative regulation of protein dephosphorylation	12
BP	negative regulation of protein export from nucleus	4
BP	negative regulation of protein homodimerization activity	1
BP	negative regulation of protein kinase activity	63
BP	negative regulation of protein localization to kinetochore	1
BP	negative regulation of protein metabolic process	28
BP	negative regulation of protein phosphorylation	54
BP	negative regulation of protein polymerization	4
BP	negative regulation of protein serine/threonine kinase activity	20
BP	negative regulation of protein transport	2
BP	negative regulation of protein ubiquitination	5
BP	negative regulation of protein-containing complex assembly	24
BP	negative regulation of protein-containing complex disassembly	12
BP	negative regulation of proteolysis	14
BP	negative regulation of proteolysis involved in cellular protein catabolic process	1
BP	negative regulation of response to DNA damage stimulus	1
BP	negative regulation of response to endoplasmic reticulum stress	2
BP	negative regulation of sequestering of calcium ion	2
BP	negative regulation of signal transduction	120
BP	negative regulation of sister chromatid cohesion	2
BP	negative regulation of small GTPase mediated signal transduction	18
BP	negative regulation of stress-activated MAPK cascade	4
BP	negative regulation of supramolecular fiber organization	9
BP	negative regulation of telomerase activity	12
BP	negative regulation of telomere maintenance	4
BP	negative regulation of telomere maintenance via recombination	3
BP	negative regulation of telomere maintenance via telomerase	6
BP	negative regulation of telomere maintenance via telomere lengthening	5
BP	negative regulation of transcription by RNA polymerase II	319
BP	negative regulation of transcription by RNA polymerase III	4
BP	negative regulation of transcription elongation from RNA polymerase II promoter	7
BP	negative regulation of transcription from RNA polymerase II promoter by glucose	4
BP	negative regulation of transcription from RNA polymerase II promoter in response to stress	6
BP	negative regulation of transcription, DNA-templated	624
BP	negative regulation of translation	54
BP	negative regulation of translational elongation	2
BP	negative regulation of translational frameshifting	1
BP	negative regulation of translational initiation	18
BP	negative regulation of transmembrane transport	4
BP	negative regulation of transport	10
BP	negative regulation of transposition	5
BP	negative regulation of transposition, RNA-mediated	1
BP	negative regulation of ubiquitin protein ligase activity	3
BP	negative regulation of ubiquitin-dependent protein catabolic process	4
BP	negative regulation of ubiquitin-protein transferase activity	5
BP	nervous system development	7
BP	neurogenesis	8
BP	neuron development	7
BP	neuron differentiation	8
BP	neuron maturation	5
BP	neuron remodeling	5
BP	neurotransmitter biosynthetic process	10
BP	neurotransmitter catabolic process	6
BP	neurotransmitter metabolic process	18
BP	neurotransmitter transport	6
BP	neutral amino acid transport	14
BP	neutral lipid metabolic process	4
BP	nicotinamide metabolic process	1
BP	nicotinamide nucleotide metabolic process	15
BP	nitric oxide biosynthetic process	6
BP	nitric oxide metabolic process	2
BP	nitrogen compound metabolic process	1446
BP	nitrogen compound transport	356
BP	nonfunctional rRNA decay	6
BP	nuclear DNA replication	30
BP	nuclear chromosome segregation	27
BP	nuclear envelope organization	7
BP	nuclear export	152
BP	nuclear mRNA surveillance	27
BP	nuclear migration	24
BP	nuclear migration along microtubule	5
BP	nuclear polyadenylation-dependent CUT catabolic process	3
BP	nuclear polyadenylation-dependent antisense transcript catabolic process	1
BP	nuclear polyadenylation-dependent mRNA catabolic process	10
BP	nuclear polyadenylation-dependent rRNA catabolic process	12
BP	nuclear polyadenylation-dependent snRNA catabolic process	1
BP	nuclear polyadenylation-dependent snoRNA catabolic process	1
BP	nuclear polyadenylation-dependent tRNA catabolic process	5
BP	nuclear pore complex assembly	8
BP	nuclear pore localization	1
BP	nuclear pore organization	21
BP	nuclear retention of pre-mRNA at the site of transcription	5
BP	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription	3
BP	nuclear retention of unspliced pre-mRNA at the site of transcription	2
BP	nuclear-transcribed mRNA catabolic process	100
BP	nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay	5
BP	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	66
BP	nuclear-transcribed mRNA catabolic process, deadenylation-independent decay	4
BP	nuclear-transcribed mRNA catabolic process, exonucleolytic	12
BP	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	10
BP	nuclear-transcribed mRNA catabolic process, non-stop decay	4
BP	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	49
BP	nuclear-transcribed mRNA poly(A) tail shortening	10
BP	nucleic acid phosphodiester bond hydrolysis	336
BP	nucleobase transport	1
BP	nucleobase-containing compound metabolic process	1110
BP	nucleobase-containing compound transport	52
BP	nucleobase-containing small molecule catabolic process	4
BP	nucleobase-containing small molecule metabolic process	65
BP	nucleocytoplasmic transport	322
BP	nucleolar large rRNA transcription by RNA polymerase I	12
BP	nucleolus organization	3
BP	nucleoside diphosphate biosynthetic process	4
BP	nucleoside diphosphate metabolic process	12
BP	nucleoside diphosphate phosphorylation	21
BP	nucleoside metabolic process	36
BP	nucleoside monophosphate biosynthetic process	16
BP	nucleoside monophosphate phosphorylation	4
BP	nucleoside phosphate catabolic process	12
BP	nucleoside phosphate metabolic process	52
BP	nucleoside transmembrane transport	4
BP	nucleoside transport	2
BP	nucleoside triphosphate biosynthetic process	30
BP	nucleoside triphosphate catabolic process	4
BP	nucleosome assembly	60
BP	nucleosome disassembly	12
BP	nucleosome mobilization	8
BP	nucleosome organization	81
BP	nucleosome positioning	20
BP	nucleotide biosynthetic process	144
BP	nucleotide metabolic process	156
BP	nucleotide phosphorylation	21
BP	nucleotide transport	9
BP	nucleotide-excision repair	133
BP	nucleotide-excision repair involved in interstrand cross-link repair	1
BP	nucleotide-excision repair, DNA duplex unwinding	2
BP	nucleotide-excision repair, DNA gap filling	8
BP	nucleotide-excision repair, DNA incision	12
BP	nucleotide-excision repair, DNA incision, 3'-to lesion	3
BP	nucleotide-excision repair, DNA incision, 5'-to lesion	8
BP	nucleotide-sugar metabolic process	10
BP	nucleus localization	12
BP	nucleus organization	90
BP	oligopeptide transmembrane transport	10
BP	oligopeptide transport	6
BP	oligosaccharide biosynthetic process	21
BP	oligosaccharide catabolic process	5
BP	oligosaccharide metabolic process	24
BP	one-carbon metabolic process	16
BP	organelle assembly	144
BP	organelle disassembly	42
BP	organelle fusion	66
BP	organelle localization	108
BP	organelle localization by membrane tethering	11
BP	organelle organization	1570
BP	organelle transport along microtubule	20
BP	organic acid metabolic process	270
BP	organic acid transmembrane transport	20
BP	organic anion transport	264
BP	organic cation transport	30
BP	organic substance transport	194
BP	organonitrogen compound catabolic process	234
BP	organophosphate catabolic process	9
BP	organophosphate metabolic process	88
BP	ornithine biosynthetic process	1
BP	ornithine metabolic process	2
BP	osmosensory signaling pathway	16
BP	oxaloacetate metabolic process	3
BP	oxidative phosphorylation	28
BP	pH reduction	39
BP	pantothenate metabolic process	12
BP	pentose biosynthetic process	2
BP	pentose catabolic process	1
BP	pentose metabolic process	8
BP	pentose transmembrane transport	1
BP	pentose-phosphate shunt	15
BP	pentose-phosphate shunt, non-oxidative branch	9
BP	pentose-phosphate shunt, oxidative branch	6
BP	peptide biosynthetic process	216
BP	peptide catabolic process	12
BP	peptide metabolic process	488
BP	peptide secretion	5
BP	peptide transport	720
BP	peptidyl-amino acid modification	64
BP	peptidyl-arginine N-methylation	2
BP	peptidyl-arginine methylation	2
BP	peptidyl-arginine methylation, to symmetrical-dimethyl arginine	2
BP	peptidyl-diphthamide biosynthetic process from peptidyl-histidine	18
BP	peptidyl-glutamic acid modification	1
BP	peptidyl-glutamine methylation	2
BP	peptidyl-histidine phosphorylation	2
BP	peptidyl-lysine acetylation	40
BP	peptidyl-lysine dimethylation	3
BP	peptidyl-lysine methylation	44
BP	peptidyl-lysine modification	35
BP	peptidyl-lysine monomethylation	9
BP	peptidyl-lysine trimethylation	16
BP	peptidyl-methionine modification	6
BP	peptidyl-proline hydroxylation	15
BP	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	15
BP	peptidyl-proline modification	9
BP	peptidyl-serine dephosphorylation	15
BP	peptidyl-serine phosphorylation	80
BP	peptidyl-threonine phosphorylation	12
BP	peptidyl-tyrosine dephosphorylation	15
BP	peptidyl-tyrosine phosphorylation	16
BP	peroxisomal membrane transport	2
BP	peroxisome fission	12
BP	peroxisome organization	60
BP	phenotypic switching	6
BP	phenylalanyl-tRNA aminoacylation	9
BP	phosphate ion transmembrane transport	8
BP	phosphate ion transport	30
BP	phosphate-containing compound metabolic process	870
BP	phosphatidic acid biosynthetic process	14
BP	phosphatidic acid metabolic process	4
BP	phosphatidylcholine acyl-chain remodeling	8
BP	phosphatidylcholine biosynthetic process	6
BP	phosphatidylcholine catabolic process	5
BP	phosphatidylcholine metabolic process	24
BP	phosphatidylethanolamine biosynthetic process	10
BP	phosphatidylethanolamine metabolic process	4
BP	phosphatidylglycerol metabolic process	3
BP	phosphatidylinositol biosynthetic process	25
BP	phosphatidylinositol dephosphorylation	10
BP	phosphatidylinositol metabolic process	64
BP	phosphatidylinositol phosphate biosynthetic process	30
BP	phosphatidylinositol-3-phosphate biosynthetic process	2
BP	phosphatidylinositol-mediated signaling	18
BP	phosphatidylserine catabolic process	6
BP	phosphatidylserine metabolic process	8
BP	phospholipid biosynthetic process	96
BP	phospholipid catabolic process	12
BP	phospholipid dephosphorylation	6
BP	phospholipid homeostasis	5
BP	phospholipid metabolic process	217
BP	phospholipid translocation	30
BP	phospholipid transport	48
BP	phosphorelay signal transduction system	2
BP	phosphorylation	483
BP	phosphorylation of RNA polymerase II C-terminal domain	9
BP	photoperiodism	2
BP	piecemeal microautophagy of the nucleus	8
BP	plasma lipoprotein particle assembly	10
BP	plasma membrane fusion	4
BP	plasma membrane lactate transport	3
BP	plasma membrane organization	12
BP	plasma membrane selenite transport	5
BP	plasma membrane tubulation	5
BP	plus-end specific microtubule depolymerization	1
BP	poly(A)+ mRNA export from nucleus	56
BP	polyadenylation-dependent snoRNA 3'-end processing	10
BP	polyamine biosynthetic process	8
BP	polyamine metabolic process	2
BP	polyamine transmembrane transport	6
BP	polyol transport	2
BP	polyphosphate metabolic process	4
BP	polysaccharide catabolic process	3
BP	polysaccharide metabolic process	20
BP	pore complex assembly	20
BP	porphyrin-containing compound biosynthetic process	12
BP	porphyrin-containing compound metabolic process	15
BP	positive regulation of ATPase activity	54
BP	positive regulation of Arp2/3 complex-mediated actin nucleation	12
BP	positive regulation of DNA binding	5
BP	positive regulation of DNA biosynthetic process	15
BP	positive regulation of DNA metabolic process	10
BP	positive regulation of DNA primase activity	1
BP	positive regulation of DNA recombination	1
BP	positive regulation of DNA repair	14
BP	positive regulation of DNA replication	15
BP	positive regulation of DNA-dependent DNA replication	3
BP	positive regulation of DNA-directed DNA polymerase activity	2
BP	positive regulation of DNA-templated transcription, elongation	55
BP	positive regulation of DNA-templated transcription, initiation	10
BP	positive regulation of G1/S transition of mitotic cell cycle	30
BP	positive regulation of G2/M transition of mitotic cell cycle	10
BP	positive regulation of GTP binding	1
BP	positive regulation of GTPase activity	72
BP	positive regulation of MAP kinase activity	16
BP	positive regulation of MAPK cascade	40
BP	positive regulation of RNA biosynthetic process	124
BP	positive regulation of RNA polymerase II transcription preinitiation complex assembly	12
BP	positive regulation of RNA splicing	20
BP	positive regulation of Ras protein signal transduction	18
BP	positive regulation of Rho guanyl-nucleotide exchange factor activity	2
BP	positive regulation of Rho protein signal transduction	6
BP	positive regulation of SNARE complex assembly	1
BP	positive regulation of SREBP signaling pathway	2
BP	positive regulation of TOR signaling	12
BP	positive regulation of TORC1 signaling	6
BP	positive regulation of actin filament depolymerization	15
BP	positive regulation of actin filament polymerization	72
BP	positive regulation of actin nucleation	9
BP	positive regulation of apoptotic process	10
BP	positive regulation of attachment of spindle microtubules to kinetochore	2
BP	positive regulation of autophagosome maturation	8
BP	positive regulation of autophagy	35
BP	positive regulation of binding	6
BP	positive regulation of catalytic activity	330
BP	positive regulation of cell adhesion	36
BP	positive regulation of cell aging	6
BP	positive regulation of cell cycle	216
BP	positive regulation of cell cycle G1/S phase transition	25
BP	positive regulation of cell cycle G2/M phase transition	6
BP	positive regulation of cell cycle checkpoint	1
BP	positive regulation of cell cycle phase transition	25
BP	positive regulation of cell cycle process	64
BP	positive regulation of cell death	14
BP	positive regulation of cell development	1
BP	positive regulation of cell differentiation	16
BP	positive regulation of cell division	76
BP	positive regulation of cell fate commitment	2
BP	positive regulation of cell growth	28
BP	positive regulation of cell migration	8
BP	positive regulation of cell motility	9
BP	positive regulation of cell population proliferation	9
BP	positive regulation of cell-substrate adhesion	24
BP	positive regulation of cellular biosynthetic process	156
BP	positive regulation of cellular component biogenesis	23
BP	positive regulation of cellular component movement	5
BP	positive regulation of cellular protein catabolic process	95
BP	positive regulation of cellular protein localization	9
BP	positive regulation of cellular protein metabolic process	144
BP	positive regulation of chromosome organization	52
BP	positive regulation of chromosome segregation	40
BP	positive regulation of chromosome separation	38
BP	positive regulation of cyclin-dependent protein kinase activity	12
BP	positive regulation of cyclin-dependent protein serine/threonine kinase activity	15
BP	positive regulation of cytokinesis	12
BP	positive regulation of cytoplasmic mRNA processing body assembly	9
BP	positive regulation of cytoplasmic translation	4
BP	positive regulation of cytoskeleton organization	60
BP	positive regulation of cytosolic calcium ion concentration	16
BP	positive regulation of deoxyribonuclease activity	2
BP	positive regulation of dephosphorylation	2
BP	positive regulation of developmental growth	8
BP	positive regulation of endocytosis	21
BP	positive regulation of endodeoxyribonuclease activity	4
BP	positive regulation of endopeptidase activity	10
BP	positive regulation of establishment of protein localization	9
BP	positive regulation of exocytosis	6
BP	positive regulation of fatty acid beta-oxidation	5
BP	positive regulation of fatty acid metabolic process	3
BP	positive regulation of fatty acid oxidation	5
BP	positive regulation of gene expression	759
BP	positive regulation of gene expression, epigenetic	20
BP	positive regulation of gluconeogenesis	8
BP	positive regulation of glucose import	6
BP	positive regulation of glucose metabolic process	12
BP	positive regulation of glucose transmembrane transport	4
BP	positive regulation of glycogen biosynthetic process	6
BP	positive regulation of growth	75
BP	positive regulation of histone H3-K9 dimethylation	3
BP	positive regulation of histone H3-K9 methylation	4
BP	positive regulation of histone H3-K9 trimethylation	2
BP	positive regulation of histone acetylation	14
BP	positive regulation of histone methylation	2
BP	positive regulation of histone modification	3
BP	positive regulation of hydrogen peroxide-induced cell death	1
BP	positive regulation of hydrogen peroxide-mediated programmed cell death	3
BP	positive regulation of hydrolase activity	54
BP	positive regulation of immune response	10
BP	positive regulation of immune system process	2
BP	positive regulation of intracellular protein transport	6
BP	positive regulation of intracellular signal transduction	40
BP	positive regulation of intracellular transport	9
BP	positive regulation of ion transport	2
BP	positive regulation of kinase activity	40
BP	positive regulation of ligase activity	5
BP	positive regulation of lipid biosynthetic process	12
BP	positive regulation of lipid catabolic process	3
BP	positive regulation of lipid metabolic process	3
BP	positive regulation of lipid storage	6
BP	positive regulation of locomotion	2
BP	positive regulation of mRNA catabolic process	6
BP	positive regulation of mRNA splicing, via spliceosome	12
BP	positive regulation of macroautophagy	14
BP	positive regulation of macromolecule biosynthetic process	73
BP	positive regulation of meiosis I	1
BP	positive regulation of meiotic nuclear division	3
BP	positive regulation of membrane potential	3
BP	positive regulation of metabolic process	224
BP	positive regulation of microtubule polymerization	15
BP	positive regulation of mitochondrial DNA metabolic process	2
BP	positive regulation of mitochondrial DNA replication	4
BP	positive regulation of mitochondrial membrane potential	5
BP	positive regulation of mitochondrial translation	15
BP	positive regulation of mitochondrion organization	6
BP	positive regulation of mitotic cell cycle	140
BP	positive regulation of mitotic cell cycle phase transition	50
BP	positive regulation of mitotic cell cycle spindle assembly checkpoint	2
BP	positive regulation of mitotic cytokinesis	2
BP	positive regulation of mitotic cytokinetic process	4
BP	positive regulation of mitotic metaphase/anaphase transition	57
BP	positive regulation of mitotic nuclear division	114
BP	positive regulation of nitric oxide biosynthetic process	9
BP	positive regulation of nitric oxide metabolic process	1
BP	positive regulation of nitrogen compound metabolic process	206
BP	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	3
BP	positive regulation of nuclease activity	2
BP	positive regulation of nucleic acid-templated transcription	61
BP	positive regulation of nucleocytoplasmic transport	2
BP	positive regulation of organelle assembly	3
BP	positive regulation of organelle organization	102
BP	positive regulation of oxidative stress-induced cell death	1
BP	positive regulation of oxidoreductase activity	6
BP	positive regulation of peptidase activity	12
BP	positive regulation of peptidyl-lysine acetylation	2
BP	positive regulation of phosphatase activity	6
BP	positive regulation of phosphatidylcholine biosynthetic process	2
BP	positive regulation of phospholipid biosynthetic process	6
BP	positive regulation of phosphoprotein phosphatase activity	4
BP	positive regulation of phosphorylation	90
BP	positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues	1
BP	positive regulation of programmed cell death	12
BP	positive regulation of proteasomal protein catabolic process	133
BP	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	152
BP	positive regulation of protein acetylation	6
BP	positive regulation of protein autophosphorylation	6
BP	positive regulation of protein autoubiquitination	2
BP	positive regulation of protein binding	5
BP	positive regulation of protein catabolic process	171
BP	positive regulation of protein dephosphorylation	6
BP	positive regulation of protein depolymerization	3
BP	positive regulation of protein export from nucleus	5
BP	positive regulation of protein kinase activity	80
BP	positive regulation of protein localization to membrane	6
BP	positive regulation of protein maturation	1
BP	positive regulation of protein metabolic process	192
BP	positive regulation of protein modification process	88
BP	positive regulation of protein phosphorylation	120
BP	positive regulation of protein polymerization	24
BP	positive regulation of protein serine/threonine kinase activity	42
BP	positive regulation of protein sumoylation	5
BP	positive regulation of protein targeting to membrane	6
BP	positive regulation of protein transport	9
BP	positive regulation of protein ubiquitination	8
BP	positive regulation of protein-containing complex assembly	105
BP	positive regulation of protein-containing complex disassembly	10
BP	positive regulation of proteolysis	80
BP	positive regulation of proteolysis involved in cellular protein catabolic process	57
BP	positive regulation of pyruvate dehydrogenase activity	1
BP	positive regulation of reactive oxygen species biosynthetic process	4
BP	positive regulation of reactive oxygen species metabolic process	6
BP	positive regulation of receptor internalization	5
BP	positive regulation of receptor-mediated endocytosis	14
BP	positive regulation of reciprocal meiotic recombination	4
BP	positive regulation of replicative senescence	3
BP	positive regulation of response to DNA damage stimulus	8
BP	positive regulation of response to oxidative stress	4
BP	positive regulation of secretion	4
BP	positive regulation of signal transduction	60
BP	positive regulation of small GTPase mediated signal transduction	9
BP	positive regulation of sodium ion transport	5
BP	positive regulation of stress-activated MAPK cascade	15
BP	positive regulation of stress-activated protein kinase signaling cascade	6
BP	positive regulation of supramolecular fiber organization	14
BP	positive regulation of telomere maintenance	6
BP	positive regulation of telomere maintenance via telomerase	12
BP	positive regulation of telomere maintenance via telomere lengthening	4
BP	positive regulation of transcription by RNA polymerase I	8
BP	positive regulation of transcription by RNA polymerase II	561
BP	positive regulation of transcription by RNA polymerase III	5
BP	positive regulation of transcription by glucose	1
BP	positive regulation of transcription elongation from RNA polymerase II promoter	66
BP	positive regulation of transcription from RNA polymerase II promoter by glucose	2
BP	positive regulation of transcription from RNA polymerase II promoter in response to calcium ion	1
BP	positive regulation of transcription from RNA polymerase II promoter in response to heat stress	2
BP	positive regulation of transcription from RNA polymerase II promoter in response to stress	20
BP	positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus	24
BP	positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	3
BP	positive regulation of transcription initiation from RNA polymerase II promoter	30
BP	positive regulation of transcription involved in G1/S transition of mitotic cell cycle	6
BP	positive regulation of transcription involved in meiotic cell cycle	2
BP	positive regulation of transcription, DNA-templated	522
BP	positive regulation of translation	54
BP	positive regulation of translational fidelity	2
BP	positive regulation of translational initiation	6
BP	positive regulation of transport	10
BP	positive regulation of ubiquitin-dependent endocytosis	2
BP	positive regulation of ubiquitin-dependent protein catabolic process	12
BP	positive regulation of vacuole organization	2
BP	positive regulation of vesicle fusion	10
BP	positive regulation of viral entry into host cell	15
BP	positive regulation of viral life cycle	5
BP	positive regulation of viral process	15
BP	post-Golgi vesicle-mediated transport	126
BP	post-embryonic animal organ development	1
BP	post-embryonic animal organ morphogenesis	1
BP	post-embryonic development	6
BP	post-translational protein modification	48
BP	postreplication repair	36
BP	posttranscriptional regulation of gene expression	185
BP	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	4
BP	posttranslational protein targeting to endoplasmic reticulum membrane	8
BP	posttranslational protein targeting to membrane, translocation	6
BP	potassium ion homeostasis	20
BP	potassium ion transmembrane transport	56
BP	potassium ion transport	40
BP	pre-mRNA catabolic process	1
BP	pre-mRNA cleavage required for polyadenylation	24
BP	programmed cell death	30
BP	proline biosynthetic process	4
BP	proline catabolic process	3
BP	proline catabolic process to glutamate	2
BP	proline metabolic process	4
BP	prolyl-tRNA aminoacylation	2
BP	proteasomal protein catabolic process	204
BP	proteasomal ubiquitin-independent protein catabolic process	27
BP	proteasome assembly	48
BP	proteasome core complex assembly	1
BP	proteasome regulatory particle assembly	15
BP	proteasome-mediated ubiquitin-dependent protein catabolic process	368
BP	protein K48-linked deubiquitination	5
BP	protein K63-linked ubiquitination	21
BP	protein N-linked glycosylation	77
BP	protein N-linked glycosylation via asparagine	21
BP	protein O-linked glycosylation	28
BP	protein O-linked mannosylation	15
BP	protein acetylation	132
BP	protein acylation	22
BP	protein alpha-1,2-demannosylation	10
BP	protein autophosphorylation	18
BP	protein autosumoylation	1
BP	protein autoubiquitination	6
BP	protein biotinylation	2
BP	protein catabolic process	696
BP	protein catabolic process in the vacuole	6
BP	protein complex oligomerization	16
BP	protein deacetylation	24
BP	protein deglutathionylation	1
BP	protein deglycosylation	30
BP	protein delipidation	1
BP	protein demethylation	6
BP	protein deneddylation	9
BP	protein depalmitoylation	6
BP	protein dephosphorylation	112
BP	protein depolymerization	4
BP	protein deubiquitination	36
BP	protein exit from endoplasmic reticulum	9
BP	protein export from nucleus	304
BP	protein farnesylation	2
BP	protein folding	315
BP	protein folding in endoplasmic reticulum	42
BP	protein geranylgeranylation	4
BP	protein glycosylation	105
BP	protein homooligomerization	18
BP	protein homotetramerization	6
BP	protein hydroxylation	10
BP	protein import	99
BP	protein import into mitochondrial intermembrane space	6
BP	protein import into mitochondrial matrix	65
BP	protein import into nucleus	84
BP	protein import into peroxisome matrix	12
BP	protein import into peroxisome matrix, docking	8
BP	protein initiator methionine removal	1
BP	protein insertion into membrane	12
BP	protein insertion into mitochondrial inner membrane	15
BP	protein insertion into mitochondrial inner membrane from matrix	6
BP	protein insertion into mitochondrial membrane	6
BP	protein insertion into mitochondrial outer membrane	2
BP	protein lipidation	30
BP	protein lipoylation	5
BP	protein localization	1629
BP	protein localization to Golgi apparatus	18
BP	protein localization to actin cytoskeleton	1
BP	protein localization to cell cortex	12
BP	protein localization to cell periphery	16
BP	protein localization to cell surface	5
BP	protein localization to chromatin	6
BP	protein localization to chromosome	22
BP	protein localization to chromosome, centromeric region	24
BP	protein localization to cytoskeleton	15
BP	protein localization to endoplasmic reticulum	48
BP	protein localization to endoplasmic reticulum exit site	4
BP	protein localization to endosome	4
BP	protein localization to heterochromatin	2
BP	protein localization to kinetochore	28
BP	protein localization to membrane	165
BP	protein localization to microtubule	5
BP	protein localization to microtubule plus-end	2
BP	protein localization to mitochondrion	105
BP	protein localization to mitotic spindle pole body	1
BP	protein localization to nuclear envelope	3
BP	protein localization to nuclear inner membrane	1
BP	protein localization to nucleus	75
BP	protein localization to organelle	606
BP	protein localization to phagophore assembly site	8
BP	protein localization to plasma membrane	80
BP	protein localization to vacuolar membrane	1
BP	protein localization to vacuole	56
BP	protein mannosylation	12
BP	protein maturation	161
BP	protein maturation by iron-sulfur cluster transfer	4
BP	protein metabolic process	698
BP	protein methylation	70
BP	protein modification by small protein conjugation	93
BP	protein modification by small protein removal	18
BP	protein modification process	174
BP	protein monoubiquitination	20
BP	protein neddylation	3
BP	protein peptidyl-prolyl isomerization	20
BP	protein phosphorylation	300
BP	protein polymerization	45
BP	protein polyubiquitination	72
BP	protein prenylation	4
BP	protein processing	91
BP	protein processing involved in protein targeting to mitochondrion	8
BP	protein quality control for misfolded or incompletely synthesized proteins	65
BP	protein refolding	65
BP	protein repair	6
BP	protein retention in ER lumen	12
BP	protein retention in Golgi apparatus	6
BP	protein secretion	40
BP	protein stabilization	20
BP	protein sumoylation	18
BP	protein targeting	376
BP	protein targeting to ER	48
BP	protein targeting to membrane	98
BP	protein targeting to mitochondrion	171
BP	protein targeting to peroxisome	10
BP	protein targeting to vacuole	26
BP	protein targeting to vacuole involved in autophagy	1
BP	protein tetramerization	4
BP	protein transmembrane transport	56
BP	protein transport	959
BP	protein transport along microtubule	12
BP	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	5
BP	protein ubiquitination	234
BP	protein unfolding	2
BP	protein urmylation	2
BP	protein-DNA complex assembly	64
BP	protein-DNA complex disassembly	3
BP	protein-containing complex assembly	1022
BP	protein-containing complex disassembly	21
BP	protein-containing complex localization	47
BP	protein-containing complex subunit organization	181
BP	protein-lipid complex assembly	5
BP	proteolysis	963
BP	proteolysis involved in cellular protein catabolic process	444
BP	proton transmembrane transport	176
BP	proton-transporting ATP synthase complex assembly	2
BP	proton-transporting V-type ATPase complex assembly	4
BP	pseudouridine synthesis	2
BP	pteridine-containing compound biosynthetic process	3
BP	pteridine-containing compound metabolic process	3
BP	purine nucleobase biosynthetic process	12
BP	purine nucleobase catabolic process	1
BP	purine nucleobase metabolic process	12
BP	purine nucleoside catabolic process	2
BP	purine nucleoside metabolic process	10
BP	purine nucleotide biosynthetic process	105
BP	purine nucleotide catabolic process	2
BP	purine nucleotide metabolic process	102
BP	purine nucleotide transport	7
BP	purine ribonucleoside catabolic process	2
BP	purine ribonucleoside monophosphate biosynthetic process	26
BP	purine ribonucleoside salvage	2
BP	purine ribonucleotide transport	7
BP	purine-containing compound salvage	2
BP	purine-containing compound transmembrane transport	2
BP	putrescine transport	3
BP	pyridoxal 5'-phosphate salvage	4
BP	pyridoxal phosphate biosynthetic process	4
BP	pyridoxine biosynthetic process	6
BP	pyrimidine deoxyribonucleotide catabolic process	2
BP	pyrimidine nucleobase biosynthetic process	5
BP	pyrimidine nucleobase metabolic process	6
BP	pyrimidine nucleoside catabolic process	1
BP	pyrimidine nucleoside metabolic process	24
BP	pyrimidine nucleotide biosynthetic process	6
BP	pyrimidine nucleotide metabolic process	18
BP	pyrimidine nucleotide-sugar transmembrane transport	1
BP	pyrimidine ribonucleotide biosynthetic process	4
BP	pyrimidine-containing compound salvage	2
BP	pyruvate biosynthetic process	15
BP	pyruvate metabolic process	33
BP	pyruvate transmembrane transport	4
BP	quinone metabolic process	10
BP	rDNA heterochromatin assembly	49
BP	rRNA 3'-end processing	10
BP	rRNA acetylation involved in maturation of SSU-rRNA	1
BP	rRNA base methylation	4
BP	rRNA catabolic process	35
BP	rRNA export from nucleus	8
BP	rRNA metabolic process	188
BP	rRNA methylation	24
BP	rRNA modification	7
BP	rRNA processing	648
BP	rRNA pseudouridine synthesis	2
BP	rRNA transcription	66
BP	rRNA transport	4
BP	re-entry into mitotic cell cycle	2
BP	reactive oxygen species biosynthetic process	3
BP	reactive oxygen species metabolic process	55
BP	receptor catabolic process	5
BP	receptor metabolic process	1
BP	receptor-mediated endocytosis	48
BP	reciprocal meiotic recombination	66
BP	recombinational repair	57
BP	recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex	1
BP	reductive iron assimilation	2
BP	regulation of ATP biosynthetic process	6
BP	regulation of ATP metabolic process	6
BP	regulation of ATPase activity	50
BP	regulation of Arp2/3 complex-mediated actin nucleation	16
BP	regulation of DNA binding	20
BP	regulation of DNA biosynthetic process	5
BP	regulation of DNA helicase activity	1
BP	regulation of DNA recombination	33
BP	regulation of DNA repair	15
BP	regulation of DNA replication	91
BP	regulation of DNA replication origin binding	2
BP	regulation of DNA strand resection involved in replication fork processing	4
BP	regulation of DNA-binding transcription factor activity	18
BP	regulation of DNA-dependent DNA replication	11
BP	regulation of DNA-dependent DNA replication initiation	8
BP	regulation of DNA-templated transcription in response to stress	36
BP	regulation of DNA-templated transcription, elongation	78
BP	regulation of ER to Golgi vesicle-mediated transport	4
BP	regulation of G protein-coupled receptor signaling pathway	14
BP	regulation of G1/S transition of mitotic cell cycle	36
BP	regulation of G2/M transition of mitotic cell cycle	60
BP	regulation of GTP binding	1
BP	regulation of GTPase activity	104
BP	regulation of MAP kinase activity	15
BP	regulation of MAPK cascade	30
BP	regulation of Notch signaling pathway	6
BP	regulation of RNA biosynthetic process	465
BP	regulation of RNA export from nucleus	1
BP	regulation of RNA metabolic process	501
BP	regulation of RNA polymerase II transcription preinitiation complex assembly	5
BP	regulation of RNA splicing	20
BP	regulation of Ras protein signal transduction	35
BP	regulation of Rho guanyl-nucleotide exchange factor activity	1
BP	regulation of Rho protein signal transduction	12
BP	regulation of SNARE complex assembly	9
BP	regulation of SREBP signaling pathway	6
BP	regulation of TOR signaling	28
BP	regulation of TORC1 signaling	3
BP	regulation of actin cytoskeleton organization	128
BP	regulation of actin filament bundle assembly	1
BP	regulation of actin filament depolymerization	8
BP	regulation of actin filament length	24
BP	regulation of actin filament organization	39
BP	regulation of actin filament polymerization	55
BP	regulation of actin filament-based process	32
BP	regulation of actin nucleation	8
BP	regulation of actin polymerization or depolymerization	48
BP	regulation of adenylate cyclase activity	2
BP	regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway	1
BP	regulation of anion transport	20
BP	regulation of apoptotic process	96
BP	regulation of apoptotic signaling pathway	5
BP	regulation of arginine metabolic process	1
BP	regulation of attachment of spindle microtubules to kinetochore	6
BP	regulation of autophagosome assembly	10
BP	regulation of autophagosome maturation	6
BP	regulation of autophagy	72
BP	regulation of barbed-end actin filament capping	2
BP	regulation of binding	12
BP	regulation of cAMP-mediated signaling	3
BP	regulation of calcium-mediated signaling	12
BP	regulation of catalytic activity	440
BP	regulation of cation transmembrane transport	2
BP	regulation of cell adhesion	42
BP	regulation of cell cycle	672
BP	regulation of cell cycle G1/S phase transition	36
BP	regulation of cell cycle G2/M phase transition	36
BP	regulation of cell cycle phase transition	102
BP	regulation of cell cycle process	210
BP	regulation of cell death	26
BP	regulation of cell differentiation	40
BP	regulation of cell division	20
BP	regulation of cell fate commitment	1
BP	regulation of cell growth	126
BP	regulation of cell migration	8
BP	regulation of cell morphogenesis	45
BP	regulation of cell motility	4
BP	regulation of cell population proliferation	16
BP	regulation of cell projection assembly	4
BP	regulation of cell projection organization	4
BP	regulation of cell shape	72
BP	regulation of cell size	20
BP	regulation of cell-cell adhesion	10
BP	regulation of cell-substrate adhesion	8
BP	regulation of cellular amino acid metabolic process	1
BP	regulation of cellular carbohydrate catabolic process	2
BP	regulation of cellular component movement	1
BP	regulation of cellular component organization	258
BP	regulation of cellular component size	17
BP	regulation of cellular ketone metabolic process	12
BP	regulation of cellular localization	57
BP	regulation of cellular pH	45
BP	regulation of cellular process	388
BP	regulation of cellular protein catabolic process	6
BP	regulation of cellular protein localization	60
BP	regulation of cellular protein metabolic process	273
BP	regulation of cellular respiration	4
BP	regulation of cellular response to drug	4
BP	regulation of cellular response to heat	24
BP	regulation of cellular response to oxidative stress	35
BP	regulation of cellular response to stress	136
BP	regulation of centromere complex assembly	2
BP	regulation of cholesterol biosynthetic process	4
BP	regulation of cholesterol metabolic process	6
BP	regulation of chromatin assembly	18
BP	regulation of chromatin assembly or disassembly	12
BP	regulation of chromatin organization	76
BP	regulation of chromosome condensation	2
BP	regulation of chromosome organization	171
BP	regulation of chromosome segregation	180
BP	regulation of chromosome separation	62
BP	regulation of circadian rhythm	7
BP	regulation of cohesin loading	2
BP	regulation of cyclase activity	1
BP	regulation of cyclin-dependent protein serine/threonine kinase activity	42
BP	regulation of cytokinesis	30
BP	regulation of cytoplasmic translation	27
BP	regulation of cytoplasmic translational fidelity	1
BP	regulation of cytoskeleton organization	184
BP	regulation of cytosolic calcium ion concentration	16
BP	regulation of dephosphorylation	52
BP	regulation of developmental growth	4
BP	regulation of developmental process	23
BP	regulation of double-strand break repair	4
BP	regulation of double-strand break repair via homologous recombination	5
BP	regulation of double-strand break repair via nonhomologous end joining	4
BP	regulation of endocytosis	40
BP	regulation of endodeoxyribonuclease activity	4
BP	regulation of endopeptidase activity	6
BP	regulation of endoplasmic reticulum unfolded protein response	4
BP	regulation of endosome size	3
BP	regulation of entry of bacterium into host cell	2
BP	regulation of establishment of bipolar cell polarity	1
BP	regulation of establishment of cell polarity	10
BP	regulation of establishment of protein localization	36
BP	regulation of establishment of protein localization to chromosome	2
BP	regulation of establishment or maintenance of cell polarity	24
BP	regulation of exit from mitosis	36
BP	regulation of exocyst localization	1
BP	regulation of exocytosis	36
BP	regulation of fatty acid beta-oxidation	4
BP	regulation of fatty acid biosynthetic process	3
BP	regulation of fatty acid metabolic process	8
BP	regulation of fatty acid oxidation	2
BP	regulation of fatty acid transport	1
BP	regulation of gene expression	1696
BP	regulation of gene expression, epigenetic	265
BP	regulation of gene silencing	9
BP	regulation of generation of precursor metabolites and energy	8
BP	regulation of gluconeogenesis	36
BP	regulation of glucose import	4
BP	regulation of glucose metabolic process	70
BP	regulation of glucose transmembrane transport	4
BP	regulation of glutamine family amino acid metabolic process	1
BP	regulation of glycogen biosynthetic process	20
BP	regulation of glycogen catabolic process	2
BP	regulation of glycogen metabolic process	12
BP	regulation of glycolytic process	18
BP	regulation of growth	99
BP	regulation of histone H2B conserved C-terminal lysine ubiquitination	1
BP	regulation of histone H3-K14 acetylation	3
BP	regulation of histone H3-K36 methylation	3
BP	regulation of histone H3-K36 trimethylation	1
BP	regulation of histone H3-K4 methylation	15
BP	regulation of histone H3-K9 acetylation	1
BP	regulation of histone H3-K9 methylation	2
BP	regulation of histone H3-K9 trimethylation	1
BP	regulation of histone acetylation	15
BP	regulation of histone methylation	21
BP	regulation of histone modification	30
BP	regulation of histone ubiquitination	1
BP	regulation of hydrogen peroxide-induced cell death	1
BP	regulation of immune response	12
BP	regulation of immune system process	8
BP	regulation of intracellular pH	90
BP	regulation of intracellular protein transport	30
BP	regulation of intracellular signal transduction	104
BP	regulation of intracellular transport	24
BP	regulation of intrinsic apoptotic signaling pathway	25
BP	regulation of ion transmembrane transport	9
BP	regulation of ion transport	6
BP	regulation of isoprenoid metabolic process	1
BP	regulation of kinase activity	60
BP	regulation of lipid biosynthetic process	24
BP	regulation of lipid catabolic process	3
BP	regulation of lipid kinase activity	2
BP	regulation of lipid metabolic process	70
BP	regulation of lipid storage	4
BP	regulation of lipid transport	8
BP	regulation of localization	43
BP	regulation of locomotion	3
BP	regulation of mRNA 3'-end processing	2
BP	regulation of mRNA export from nucleus	3
BP	regulation of mRNA processing	20
BP	regulation of mRNA splicing, via spliceosome	10
BP	regulation of mRNA stability	42
BP	regulation of mRNA stability involved in response to oxidative stress	2
BP	regulation of mRNA stability involved in response to stress	2
BP	regulation of macroautophagy	25
BP	regulation of meiosis I	6
BP	regulation of meiotic cell cycle	39
BP	regulation of meiotic nuclear division	6
BP	regulation of membrane lipid distribution	36
BP	regulation of membrane permeability	8
BP	regulation of membrane potential	15
BP	regulation of metabolic process	546
BP	regulation of microtubule cytoskeleton organization	49
BP	regulation of microtubule depolymerization	2
BP	regulation of microtubule polymerization	24
BP	regulation of microtubule polymerization or depolymerization	15
BP	regulation of microtubule-based process	21
BP	regulation of mitochondrial DNA metabolic process	2
BP	regulation of mitochondrial DNA replication	2
BP	regulation of mitochondrial membrane permeability	10
BP	regulation of mitochondrial membrane potential	14
BP	regulation of mitochondrial translation	9
BP	regulation of mitochondrion organization	18
BP	regulation of mitotic cell cycle	434
BP	regulation of mitotic cell cycle DNA replication	2
BP	regulation of mitotic cell cycle phase transition	200
BP	regulation of mitotic cell cycle spindle assembly checkpoint	12
BP	regulation of mitotic cytokinesis	12
BP	regulation of mitotic metaphase/anaphase transition	124
BP	regulation of mitotic nuclear division	280
BP	regulation of mitotic recombination	8
BP	regulation of mitotic sister chromatid separation	31
BP	regulation of mitotic spindle assembly	4
BP	regulation of mitotic spindle organization	15
BP	regulation of neurotransmitter levels	18
BP	regulation of nitric oxide biosynthetic process	2
BP	regulation of nitrogen utilization	3
BP	regulation of nuclear cell cycle DNA replication	6
BP	regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	4
BP	regulation of nucleic acid-templated transcription	310
BP	regulation of nucleocytoplasmic transport	20
BP	regulation of nucleotide-excision repair	2
BP	regulation of organelle assembly	14
BP	regulation of organelle organization	103
BP	regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	5
BP	regulation of oxidoreductase activity	2
BP	regulation of pH	75
BP	regulation of peptidase activity	4
BP	regulation of peptidyl-tyrosine phosphorylation	6
BP	regulation of phagocytosis	5
BP	regulation of phenotypic switching	4
BP	regulation of phosphatase activity	44
BP	regulation of phosphate transport	1
BP	regulation of phosphatidylcholine biosynthetic process	1
BP	regulation of phosphatidylinositol dephosphorylation	4
BP	regulation of phospholipid biosynthetic process	3
BP	regulation of phospholipid metabolic process	12
BP	regulation of phosphoprotein phosphatase activity	40
BP	regulation of phosphorylation	160
BP	regulation of phosphorylation of RNA polymerase II C-terminal domain	10
BP	regulation of plasma lipoprotein particle levels	5
BP	regulation of plasma membrane bounded cell projection organization	3
BP	regulation of plasma membrane sterol distribution	1
BP	regulation of primary metabolic process	246
BP	regulation of programmed cell death	39
BP	regulation of proteasomal protein catabolic process	36
BP	regulation of proteasomal ubiquitin-dependent protein catabolic process	12
BP	regulation of protein autophosphorylation	3
BP	regulation of protein autoubiquitination	1
BP	regulation of protein binding	12
BP	regulation of protein catabolic process	36
BP	regulation of protein dephosphorylation	20
BP	regulation of protein export from nucleus	20
BP	regulation of protein kinase activity	108
BP	regulation of protein localization	112
BP	regulation of protein localization to cell periphery	1
BP	regulation of protein localization to chromatin	1
BP	regulation of protein localization to membrane	2
BP	regulation of protein localization to nucleus	3
BP	regulation of protein localization to plasma membrane	6
BP	regulation of protein metabolic process	279
BP	regulation of protein phosphorylation	189
BP	regulation of protein processing	3
BP	regulation of protein serine/threonine kinase activity	39
BP	regulation of protein serine/threonine phosphatase activity	2
BP	regulation of protein stability	27
BP	regulation of protein sumoylation	1
BP	regulation of protein targeting	1
BP	regulation of protein targeting to membrane	1
BP	regulation of protein transport	24
BP	regulation of protein ubiquitination	15
BP	regulation of protein-containing complex assembly	155
BP	regulation of protein-containing complex disassembly	14
BP	regulation of proteolysis	84
BP	regulation of purine nucleotide metabolic process	4
BP	regulation of pyruvate dehydrogenase activity	1
BP	regulation of reactive oxygen species biosynthetic process	5
BP	regulation of reactive oxygen species metabolic process	6
BP	regulation of receptor internalization	4
BP	regulation of receptor-mediated endocytosis	6
BP	regulation of response to DNA damage stimulus	20
BP	regulation of response to drug	4
BP	regulation of response to endoplasmic reticulum stress	12
BP	regulation of response to oxidative stress	7
BP	regulation of response to reactive oxygen species	1
BP	regulation of retrograde vesicle-mediated transport, Golgi to ER	2
BP	regulation of secretion	12
BP	regulation of sequestering of calcium ion	2
BP	regulation of sequestering of zinc ion	4
BP	regulation of signal transduction	252
BP	regulation of signaling	42
BP	regulation of sister chromatid cohesion	1
BP	regulation of sister chromatid segregation	70
BP	regulation of small GTPase mediated signal transduction	40
BP	regulation of sodium ion transport	4
BP	regulation of spindle assembly	2
BP	regulation of steroid biosynthetic process	8
BP	regulation of steroid metabolic process	4
BP	regulation of stress-activated MAPK cascade	20
BP	regulation of stress-activated protein kinase signaling cascade	4
BP	regulation of supramolecular fiber organization	18
BP	regulation of telomerase activity	9
BP	regulation of telomere maintenance	20
BP	regulation of telomere maintenance via telomerase	18
BP	regulation of telomere maintenance via telomere lengthening	6
BP	regulation of transcription by RNA polymerase I	10
BP	regulation of transcription by RNA polymerase II	1188
BP	regulation of transcription by RNA polymerase III	16
BP	regulation of transcription by glucose	10
BP	regulation of transcription elongation from RNA polymerase II promoter	39
BP	regulation of transcription from RNA polymerase II promoter by glucose	5
BP	regulation of transcription from RNA polymerase II promoter in response to DNA damage	1
BP	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	9
BP	regulation of transcription from RNA polymerase II promoter in response to stress	27
BP	regulation of transcription initiation from RNA polymerase II promoter	8
BP	regulation of transcription involved in G1/S transition of mitotic cell cycle	10
BP	regulation of transcription regulatory region DNA binding	3
BP	regulation of transcription, DNA-templated	1232
BP	regulation of transcription-coupled nucleotide-excision repair	1
BP	regulation of translation	231
BP	regulation of translational elongation	14
BP	regulation of translational fidelity	27
BP	regulation of translational initiation	63
BP	regulation of translational termination	20
BP	regulation of transport	66
BP	regulation of ubiquitin protein ligase activity	1
BP	regulation of ubiquitin-dependent protein catabolic process	9
BP	regulation of ubiquitin-protein transferase activity	3
BP	regulation of vacuole organization	9
BP	regulation of vesicle fusion	14
BP	regulation of vesicle-mediated transport	100
BP	regulation of viral entry into host cell	10
BP	regulation of viral life cycle	5
BP	regulation of viral process	5
BP	release of sequestered calcium ion into cytosol	12
BP	removal of superoxide radicals	24
BP	replication fork arrest	2
BP	replication fork processing	15
BP	replication fork protection	6
BP	replication fork reversal	1
BP	replication-born double-strand break repair via sister chromatid exchange	6
BP	reproduction	190
BP	reproductive process	267
BP	reproductive structure development	2
BP	reproductive system development	2
BP	rescue of stalled ribosome	3
BP	resolution of meiotic recombination intermediates	8
BP	respiratory chain complex IV assembly	20
BP	respiratory electron transport chain	30
BP	response to DNA damage checkpoint signaling	8
BP	response to UV	80
BP	response to UV-B	3
BP	response to UV-C	3
BP	response to acetate	2
BP	response to acidic pH	12
BP	response to alcohol	22
BP	response to alkaline pH	4
BP	response to aluminum ion	1
BP	response to amino acid	8
BP	response to amino acid starvation	10
BP	response to anesthetic	1
BP	response to antibiotic	90
BP	response to blue light	4
BP	response to cadmium ion	4
BP	response to calcium ion	6
BP	response to carbohydrate	12
BP	response to carbon dioxide	1
BP	response to cold	8
BP	response to copper ion	15
BP	response to cytokine	42
BP	response to decreased oxygen levels	6
BP	response to endoplasmic reticulum stress	264
BP	response to external biotic stimulus	12
BP	response to extracellular stimulus	184
BP	response to fatty acid	4
BP	response to glucose	30
BP	response to heat	156
BP	response to hormone	24
BP	response to hydrogen peroxide	25
BP	response to hyperoxia	4
BP	response to hypoxia	48
BP	response to inorganic substance	42
BP	response to insulin	5
BP	response to interleukin-12	12
BP	response to intra-S DNA damage checkpoint signaling	2
BP	response to ionizing radiation	6
BP	response to light stimulus	60
BP	response to lipid	56
BP	response to lithium ion	1
BP	response to magnesium ion	2
BP	response to mechanical stimulus	5
BP	response to metal ion	60
BP	response to methylglyoxal	3
BP	response to misfolded protein	12
BP	response to nutrient	60
BP	response to nutrient levels	176
BP	response to oleic acid	1
BP	response to organic cyclic compound	18
BP	response to organic substance	492
BP	response to organonitrogen compound	26
BP	response to osmotic stress	174
BP	response to other organism	12
BP	response to oxidative stress	351
BP	response to oxygen radical	4
BP	response to pH	45
BP	response to peptide	1
BP	response to peptide hormone	3
BP	response to pheromone	16
BP	response to radiation	78
BP	response to reactive oxygen species	77
BP	response to salt stress	18
BP	response to starvation	165
BP	response to steroid hormone	6
BP	response to stimulus	343
BP	response to superoxide	12
BP	response to temperature stimulus	108
BP	response to toxic substance	198
BP	response to unfolded protein	63
BP	response to water	1
BP	response to water deprivation	1
BP	response to zinc ion	4
BP	reticulophagy	15
BP	retrograde protein transport, ER to cytosol	3
BP	retrograde transport, endosome to Golgi	42
BP	retrograde transport, vesicle recycling within Golgi	2
BP	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	64
BP	rhythmic process	1
BP	riboflavin biosynthetic process	3
BP	riboflavin metabolic process	6
BP	riboflavin transport	3
BP	ribonucleoprotein complex assembly	116
BP	ribonucleoprotein complex biogenesis	147
BP	ribonucleoprotein complex localization	38
BP	ribonucleoside monophosphate biosynthetic process	30
BP	ribonucleotide metabolic process	39
BP	ribose phosphate biosynthetic process	48
BP	ribose phosphate metabolic process	86
BP	ribosomal large subunit assembly	60
BP	ribosomal large subunit biogenesis	205
BP	ribosomal large subunit export from nucleus	22
BP	ribosomal protein import into nucleus	3
BP	ribosomal small subunit assembly	21
BP	ribosomal small subunit biogenesis	160
BP	ribosomal small subunit export from nucleus	8
BP	ribosomal subunit export from nucleus	42
BP	ribosome assembly	150
BP	ribosome biogenesis	840
BP	ribosome disassembly	3
BP	ribosome-associated ubiquitin-dependent protein catabolic process	2
BP	second-messenger-mediated signaling	10
BP	secondary metabolic process	5
BP	secretion	36
BP	secretion by cell	36
BP	selective autophagy	10
BP	selenocysteine metabolic process	1
BP	septin cytoskeleton organization	10
BP	septin ring assembly	1
BP	septin ring organization	4
BP	sequestering of actin monomers	4
BP	serine family amino acid biosynthetic process	7
BP	serine family amino acid catabolic process	6
BP	serine family amino acid metabolic process	14
BP	serine transport	2
BP	sex determination	36
BP	sex differentiation	5
BP	sexual reproduction	190
BP	siderophore transport	1
BP	signal peptide processing	16
BP	signal transduction	770
BP	signal transduction in response to DNA damage	12
BP	signaling	264
BP	sister chromatid biorientation	14
BP	sister chromatid cohesion	91
BP	sister chromatid segregation	52
BP	small GTPase mediated signal transduction	104
BP	snRNA 3'-end processing	14
BP	snRNA catabolic process	2
BP	snRNA metabolic process	8
BP	snRNA processing	24
BP	sno(s)RNA catabolic process	2
BP	snoRNA splicing	1
BP	sodium ion transmembrane transport	6
BP	sodium ion transport	6
BP	spermidine biosynthetic process	3
BP	spermidine metabolic process	1
BP	spermine biosynthetic process	2
BP	spermine transmembrane transport	3
BP	spermine transport	3
BP	sphingoid biosynthetic process	1
BP	sphingolipid biosynthetic process	77
BP	sphingolipid mediated signaling pathway	1
BP	sphingolipid metabolic process	98
BP	spindle assembly	30
BP	spindle localization	9
BP	spindle organization	55
BP	spliceosomal complex assembly	54
BP	spliceosomal complex disassembly	4
BP	spliceosomal snRNP assembly	20
BP	spliceosomal tri-snRNP complex assembly	16
BP	stabilization of membrane potential	3
BP	steroid biosynthetic process	84
BP	steroid metabolic process	105
BP	sterol biosynthetic process	60
BP	sterol metabolic process	45
BP	sterol transport	24
BP	strand invasion	4
BP	stress granule assembly	24
BP	stress response to metal ion	1
BP	stress-activated MAPK cascade	8
BP	stress-activated protein kinase signaling cascade	15
BP	sucrose biosynthetic process	1
BP	sucrose metabolic process	2
BP	sulfate assimilation	18
BP	sulfate transmembrane transport	2
BP	sulfate transport	5
BP	sulfur amino acid biosynthetic process	14
BP	sulfur compound metabolic process	204
BP	superoxide metabolic process	24
BP	supramolecular fiber organization	147
BP	system development	2
BP	tRNA 3'-end processing	12
BP	tRNA 3'-trailer cleavage	2
BP	tRNA 3'-trailer cleavage, endonucleolytic	1
BP	tRNA 5'-end processing	1
BP	tRNA C5-cytosine methylation	1
BP	tRNA N2-guanine methylation	1
BP	tRNA acetylation	2
BP	tRNA aminoacylation	38
BP	tRNA aminoacylation for mitochondrial protein translation	6
BP	tRNA aminoacylation for protein translation	51
BP	tRNA catabolic process	10
BP	tRNA dihydrouridine synthesis	3
BP	tRNA export from nucleus	12
BP	tRNA import into mitochondrion	1
BP	tRNA metabolic process	61
BP	tRNA methylation	40
BP	tRNA modification	100
BP	tRNA processing	192
BP	tRNA pseudouridine synthesis	3
BP	tRNA re-export from nucleus	1
BP	tRNA splicing, via endonucleolytic cleavage and ligation	4
BP	tRNA thio-modification	3
BP	tRNA threonylcarbamoyladenosine metabolic process	3
BP	tRNA threonylcarbamoyladenosine modification	3
BP	tRNA transcription	5
BP	tRNA transcription by RNA polymerase III	8
BP	tRNA transport	6
BP	tRNA wobble adenosine to inosine editing	2
BP	tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation	2
BP	tRNA wobble base cytosine methylation	1
BP	tRNA wobble cytosine modification	2
BP	tRNA wobble position uridine thiolation	1
BP	tRNA wobble uridine modification	40
BP	telomerase holoenzyme complex assembly	3
BP	telomere capping	7
BP	telomere localization	2
BP	telomere maintenance	136
BP	telomere maintenance via recombination	30
BP	telomere maintenance via telomerase	36
BP	telomere maintenance via telomere lengthening	18
BP	telomere organization	17
BP	telomeric 3' overhang formation	2
BP	termination of RNA polymerase I transcription	4
BP	termination of RNA polymerase II transcription	27
BP	tetrahydrobiopterin biosynthetic process	6
BP	tetrahydrobiopterin metabolic process	1
BP	tetrahydrofolylpolyglutamate biosynthetic process	6
BP	tetrahydrofolylpolyglutamate metabolic process	2
BP	tetrapyrrole metabolic process	5
BP	thiamine diphosphate biosynthetic process	2
BP	thiamine diphosphate metabolic process	2
BP	thiamine metabolic process	9
BP	thiamine-containing compound metabolic process	3
BP	threonine catabolic process	3
BP	threonine metabolic process	5
BP	tissue development	10
BP	tissue morphogenesis	1
BP	toxin biosynthetic process	1
BP	toxin metabolic process	3
BP	transcription by RNA polymerase I	36
BP	transcription by RNA polymerase II	405
BP	transcription by RNA polymerase III	42
BP	transcription elongation from RNA polymerase I promoter	4
BP	transcription elongation from RNA polymerase II promoter	75
BP	transcription initiation from RNA polymerase II promoter	112
BP	transcription initiation from RNA polymerase III promoter	6
BP	transcription open complex formation at RNA polymerase II promoter	1
BP	transcription preinitiation complex assembly	10
BP	transcription, DNA-templated	434
BP	transcription-coupled nucleotide-excision repair	10
BP	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	10
BP	transcriptional start site selection at RNA polymerase II promoter	6
BP	translation	1060
BP	translation reinitiation	1
BP	translational elongation	55
BP	translational initiation	119
BP	translational termination	28
BP	translesion synthesis	20
BP	transmembrane receptor protein tyrosine kinase signaling pathway	7
BP	transmembrane transport	798
BP	transport	275
BP	transport along microtubule	5
BP	transposition, RNA-mediated	2
BP	transsulfuration	4
BP	traversing start control point of mitotic cell cycle	9
BP	trehalose metabolic process	2
BP	trehalose metabolism in response to stress	1
BP	tricarboxylic acid cycle	15
BP	tricarboxylic acid metabolic process	6
BP	tricarboxylic acid transmembrane transport	1
BP	triglyceride biosynthetic process	5
BP	triglyceride metabolic process	28
BP	tripeptide import across plasma membrane	2
BP	tryptophan metabolic process	6
BP	tryptophanyl-tRNA aminoacylation	4
BP	tube development	2
BP	tube morphogenesis	1
BP	tubulin complex assembly	4
BP	tyrosine biosynthetic process	1
BP	tyrosine metabolic process	3
BP	tyrosine transport	1
BP	tyrosyl-tRNA aminoacylation	1
BP	ubiquinone biosynthetic process	35
BP	ubiquinone metabolic process	10
BP	ubiquinone-6 biosynthetic process	1
BP	ubiquitin recycling	4
BP	ubiquitin-dependent ERAD pathway	180
BP	ubiquitin-dependent endocytosis	3
BP	ubiquitin-dependent glycoprotein ERAD pathway	6
BP	ubiquitin-dependent protein catabolic process	531
BP	ubiquitin-dependent protein catabolic process via the N-end rule pathway	2
BP	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	42
BP	urea cycle	6
BP	urea metabolic process	4
BP	urea transmembrane transport	4
BP	urea transport	2
BP	uroporphyrinogen III biosynthetic process	2
BP	vacuolar acidification	65
BP	vacuolar protein processing	1
BP	vacuolar proton-transporting V-type ATPase complex assembly	10
BP	vacuolar transmembrane transport	4
BP	vacuolar transport	62
BP	vacuole fusion, non-autophagic	10
BP	vacuole organization	63
BP	valine biosynthetic process	3
BP	valine catabolic process	4
BP	valine metabolic process	4
BP	very long-chain fatty acid biosynthetic process	8
BP	very long-chain fatty acid metabolic process	12
BP	very-low-density lipoprotein particle assembly	25
BP	vesicle budding from membrane	35
BP	vesicle cytoskeletal trafficking	2
BP	vesicle docking	28
BP	vesicle docking involved in exocytosis	10
BP	vesicle fusion	54
BP	vesicle fusion with Golgi apparatus	6
BP	vesicle localization	10
BP	vesicle organization	140
BP	vesicle targeting	16
BP	vesicle targeting, to, from or within Golgi	1
BP	vesicle transport along actin filament	4
BP	vesicle-mediated transport	637
BP	viral entry into host cell	6
BP	viral life cycle	2
BP	viral process	3
BP	vitamin metabolic process	15
BP	vitamin transmembrane transport	2
BP	vitamin transport	5
BP	wybutosine biosynthetic process	4
BP	xenobiotic detoxification by transmembrane export across the plasma membrane	18
BP	xenobiotic export	22
BP	xenobiotic transmembrane transport	112
BP	xenobiotic transport	15
BP	xylulose metabolic process	2
BP	zinc ion homeostasis	4
BP	zinc ion transmembrane transport	12
BP	zinc ion transport	12
CC	6-phosphofructokinase complex	4
CC	90S preribosome	81
CC	AP-1 adaptor complex	12
CC	AP-3 adaptor complex	3
CC	AP-type membrane coat adaptor complex	16
CC	ASTRA complex	1
CC	ATPase complex	18
CC	Arp2/3 protein complex	24
CC	CCAAT-binding factor complex	2
CC	CCR4-NOT complex	6
CC	CCR4-NOT core complex	2
CC	CHRAC	3
CC	CMG complex	3
CC	COP9 signalosome	3
CC	COPI vesicle coat	10
CC	COPI-coated vesicle	8
CC	COPI-coated vesicle membrane	4
CC	COPII vesicle coat	4
CC	COPII-coated ER to Golgi transport vesicle	28
CC	CORVET complex	6
CC	CURI complex	1
CC	Cajal body	6
CC	Cdc73/Paf1 complex	2
CC	Ctf18 RFC-like complex	2
CC	Cul3-RING ubiquitin ligase complex	6
CC	Cul4-RING E3 ubiquitin ligase complex	3
CC	DNA polymerase complex	4
CC	DNA repair complex	18
CC	DNA replication factor A complex	6
CC	DNA replication factor C complex	9
CC	DNA replication preinitiation complex	6
CC	EKC/KEOPS complex	2
CC	EMC complex	4
CC	ER to Golgi transport vesicle membrane	5
CC	ER ubiquitin ligase complex	1
CC	ERCC4-ERCC1 complex	3
CC	ESCRT I complex	3
CC	ESCRT III complex	12
CC	ESCRT-0 complex	3
CC	Elg1 RFC-like complex	2
CC	F-actin capping protein complex	3
CC	FACT complex	1
CC	GATOR1 complex	4
CC	GID complex	2
CC	GPI-anchor transamidase complex	4
CC	Golgi apparatus	468
CC	Golgi cis cisterna	4
CC	Golgi cisterna	24
CC	Golgi lumen	4
CC	Golgi medial cisterna	6
CC	Golgi membrane	144
CC	Golgi stack	35
CC	Golgi trans cisterna	6
CC	Golgi transport complex	4
CC	Golgi-associated vesicle	55
CC	Golgi-associated vesicle membrane	32
CC	Gtr1-Gtr2 GTPase complex	1
CC	H4 histone acetyltransferase complex	9
CC	HIR complex	1
CC	HOPS complex	4
CC	HULC complex	2
CC	I band	6
CC	Ino80 complex	8
CC	Ku70:Ku80 complex	3
CC	L-cysteine desulfurase complex	2
CC	Las1 complex	1
CC	Lsm1-7-Pat1 complex	1
CC	MCM complex	6
CC	MIS12/MIND type complex	2
CC	MWP complex	1
CC	Mis6-Sim4 complex	1
CC	Mpp10 complex	2
CC	MutLalpha complex	1
CC	MutSbeta complex	4
CC	NADH dehydrogenase complex	5
CC	NatA complex	6
CC	Noc1p-Noc2p complex	1
CC	Noc2p-Noc3p complex	1
CC	NuA3a histone acetyltransferase complex	2
CC	NuA3b histone acetyltransferase complex	2
CC	NuA4 histone acetyltransferase complex	14
CC	P-body	60
CC	PAM complex, Tim23 associated import motor	12
CC	PAS complex	1
CC	PTW/PP1 phosphatase complex	2
CC	PeBoW complex	4
CC	Prp19 complex	8
CC	R2TP complex	2
CC	RNA cap binding complex	2
CC	RNA nuclear export complex	2
CC	RNA polymerase I complex	5
CC	RNA polymerase I transcription regulator complex	2
CC	RNA polymerase II transcription regulator complex	98
CC	RNA polymerase II transcription repressor complex	2
CC	RNA polymerase II, core complex	9
CC	RNA polymerase II, holoenzyme	32
CC	RNA polymerase III complex	12
CC	RQC complex	2
CC	RSC-type complex	2
CC	Rab-protein geranylgeranyltransferase complex	4
CC	Rad17 RFC-like complex	1
CC	Rad6-Rad18 complex	1
CC	RecQ family helicase-topoisomerase III complex	1
CC	SAGA complex	16
CC	SAGA-type complex	8
CC	SCF ubiquitin ligase complex	25
CC	SLIK (SAGA-like) complex	3
CC	SNARE complex	20
CC	SPOTS complex	2
CC	SUMO ligase complex	1
CC	SWI/SNF complex	5
CC	Sec61 translocon complex	2
CC	Seh1-associated complex	3
CC	Set1C/COMPASS complex	6
CC	Sin3-type complex	1
CC	Sm-like protein family complex	14
CC	Smc5-Smc6 complex	2
CC	Swr1 complex	14
CC	TIM23 mitochondrial import inner membrane translocase complex	24
CC	TORC1 complex	3
CC	TORC2 complex	9
CC	TRAPP complex	9
CC	TRAPPI protein complex	2
CC	TRAPPII protein complex	6
CC	TRAPPIII protein complex	2
CC	TRC complex	2
CC	U1 snRNP	9
CC	U2 snRNP	9
CC	U2-type catalytic step 1 spliceosome	6
CC	U2-type catalytic step 2 spliceosome	4
CC	U2-type post-spliceosomal complex	2
CC	U2-type prespliceosome	24
CC	U2-type spliceosomal complex	45
CC	U4/U6 x U5 tri-snRNP complex	12
CC	U5 snRNP	20
CC	UTP-C complex	1
CC	WASH complex	3
CC	XPC complex	2
CC	Z disc	7
CC	actin cytoskeleton	184
CC	actin filament	24
CC	actin filament bundle	5
CC	activating signal cointegrator 1 complex	1
CC	actomyosin contractile ring	16
CC	alpha DNA polymerase:primase complex	3
CC	aminoacyl-tRNA synthetase multienzyme complex	4
CC	anchored component of external side of plasma membrane	42
CC	anchored component of membrane	36
CC	anchored component of plasma membrane	54
CC	astral microtubule	6
CC	autophagosome	6
CC	box C/D RNP complex	8
CC	bub1-bub3 complex	1
CC	catalytic complex	552
CC	catalytic step 2 spliceosome	16
CC	cell cortex	220
CC	cell cortex region	11
CC	cell division site	28
CC	cell leading edge	4
CC	cell periphery	1206
CC	cell projection	108
CC	cell projection membrane	5
CC	cell surface	360
CC	cell tip	41
CC	cellular_component	1146
CC	centrosome	7
CC	chaperone complex	12
CC	chaperonin-containing T-complex	12
CC	chromatin	1078
CC	chromosome	780
CC	chromosome passenger complex	3
CC	chromosome, centromeric core domain	4
CC	chromosome, centromeric region	132
CC	chromosome, telomeric region	96
CC	cis-Golgi network	30
CC	cis-Golgi network membrane	6
CC	clathrin adaptor complex	6
CC	clathrin coat	15
CC	clathrin coat of trans-Golgi network vesicle	9
CC	clathrin vesicle coat	6
CC	clathrin-coated vesicle	36
CC	clathrin-coated vesicle membrane	8
CC	cleavage furrow	4
CC	coated vesicle	36
CC	coated vesicle membrane	7
CC	commitment complex	8
CC	condensed chromosome	76
CC	condensed chromosome, centromeric region	52
CC	condensed nuclear chromosome	90
CC	contractile fiber	3
CC	contractile ring	16
CC	core mediator complex	2
CC	cortical actin cytoskeleton	126
CC	cortical cytoskeleton	125
CC	cortical endoplasmic reticulum	21
CC	cortical microtubule	3
CC	cortical microtubule cytoskeleton	3
CC	cullin-RING ubiquitin ligase complex	21
CC	cyclin-dependent protein kinase holoenzyme complex	9
CC	cytoophidium	2
CC	cytoplasm	11124
CC	cytoplasmic exosome (RNase complex)	15
CC	cytoplasmic microtubule	25
CC	cytoplasmic region	44
CC	cytoplasmic ribonucleoprotein granule	82
CC	cytoplasmic side of endoplasmic reticulum membrane	4
CC	cytoplasmic side of membrane	8
CC	cytoplasmic side of plasma membrane	6
CC	cytoplasmic stress granule	190
CC	cytoplasmic ubiquitin ligase complex	4
CC	cytoplasmic vesicle	330
CC	cytoplasmic vesicle membrane	35
CC	cytoskeleton	350
CC	cytosol	2475
CC	cytosolic large ribosomal subunit	138
CC	cytosolic proteasome complex	32
CC	cytosolic ribosome	126
CC	cytosolic small ribosomal subunit	85
CC	delta DNA polymerase complex	4
CC	early endosome	28
CC	early endosome membrane	6
CC	elongator holoenzyme complex	2
CC	elongin complex	2
CC	endocytic vesicle	10
CC	endomembrane system	924
CC	endoplasmic reticulum	1705
CC	endoplasmic reticulum exit site	5
CC	endoplasmic reticulum lumen	54
CC	endoplasmic reticulum membrane	496
CC	endoplasmic reticulum tubular network	28
CC	endoplasmic reticulum-Golgi intermediate compartment	48
CC	endosome	304
CC	endosome membrane	80
CC	epsilon DNA polymerase complex	3
CC	eukaryotic 43S preinitiation complex	12
CC	eukaryotic 48S preinitiation complex	4
CC	eukaryotic translation elongation factor 1 complex	9
CC	eukaryotic translation initiation factor 2B complex	4
CC	eukaryotic translation initiation factor 3 complex	16
CC	eukaryotic translation initiation factor 3 complex, eIF3e	4
CC	eukaryotic translation initiation factor 3 complex, eIF3m	4
CC	eukaryotic translation initiation factor 4F complex	4
CC	exosome (RNase complex)	24
CC	external side of plasma membrane	108
CC	extracellular matrix	66
CC	extracellular region	540
CC	extracellular space	9
CC	extrinsic component of cytoplasmic side of plasma membrane	6
CC	extrinsic component of membrane	144
CC	extrinsic component of mitochondrial inner membrane	25
CC	extrinsic component of mitochondrial outer membrane	1
CC	extrinsic component of organelle membrane	27
CC	extrinsic component of plasma membrane	12
CC	extrinsic component of vacuolar membrane	3
CC	glutamyl-tRNA(Gln) amidotransferase complex	4
CC	glycine cleavage complex	2
CC	growing cell tip	6
CC	guanyl-nucleotide exchange factor complex	8
CC	heterochromatin	90
CC	histone H3-K14 acetyltransferase complex	2
CC	histone acetyltransferase complex	34
CC	histone deacetylase complex	45
CC	histone methyltransferase complex	10
CC	inner kinetochore	2
CC	inner mitochondrial membrane protein complex	20
CC	integral component of Golgi membrane	48
CC	integral component of cytoplasmic side of endoplasmic reticulum membrane	2
CC	integral component of endoplasmic reticulum membrane	140
CC	integral component of endosome membrane	2
CC	integral component of lumenal side of endoplasmic reticulum membrane	3
CC	integral component of membrane	1750
CC	integral component of mitochondrial inner membrane	40
CC	integral component of mitochondrial membrane	48
CC	integral component of mitochondrial outer membrane	15
CC	integral component of organelle membrane	108
CC	integral component of peroxisomal membrane	21
CC	integral component of plasma membrane	280
CC	intracellular anatomical structure	2216
CC	intracellular membrane-bounded organelle	6251
CC	intracellular organelle	1958
CC	intracellular vesicle	220
CC	intrinsic component of Golgi membrane	12
CC	intrinsic component of endoplasmic reticulum membrane	60
CC	intrinsic component of endosome membrane	1
CC	intrinsic component of external side of plasma membrane	14
CC	intrinsic component of membrane	1110
CC	intrinsic component of mitochondrial inner membrane	20
CC	intrinsic component of mitochondrial outer membrane	6
CC	intrinsic component of organelle membrane	29
CC	intrinsic component of peroxisomal membrane	3
CC	intrinsic component of plasma membrane	148
CC	kinesin I complex	1
CC	kinesin complex	12
CC	kinetochore	84
CC	kinetochore microtubule	3
CC	large ribosomal subunit	90
CC	late endosome	77
CC	late endosome membrane	10
CC	lateral cell cortex	2
CC	leading edge membrane	3
CC	lipid droplet	91
CC	lysosomal membrane	27
CC	lysosome	40
CC	lytic vacuole	101
CC	m-AAA complex	1
CC	mRNA cap binding complex	3
CC	mRNA cap methyltransferase complex	2
CC	mRNA cleavage and polyadenylation specificity factor complex	15
CC	mRNA cleavage factor complex	28
CC	mannosyltransferase complex	6
CC	mediator complex	20
CC	meiotic spindle	4
CC	membrane	3393
CC	membrane coat	28
CC	membrane microdomain	16
CC	membrane protein complex	134
CC	membrane raft	64
CC	membrane-bounded organelle	906
CC	methyltransferase complex	5
CC	microtubule	42
CC	microtubule associated complex	32
CC	microtubule cytoskeleton	140
CC	microtubule end	6
CC	microtubule organizing center	112
CC	microtubule plus-end	15
CC	midbody	6
CC	mismatch repair complex	3
CC	mitochondria-associated endoplasmic reticulum membrane	6
CC	mitochondrial alpha-ketoglutarate dehydrogenase complex	15
CC	mitochondrial crista	8
CC	mitochondrial degradosome	2
CC	mitochondrial envelope	392
CC	mitochondrial inner membrane	440
CC	mitochondrial inner membrane peptidase complex	2
CC	mitochondrial intermembrane space	85
CC	mitochondrial intermembrane space protein transporter complex	3
CC	mitochondrial large ribosomal subunit	28
CC	mitochondrial matrix	385
CC	mitochondrial membrane	504
CC	mitochondrial nucleoid	40
CC	mitochondrial outer membrane	182
CC	mitochondrial outer membrane translocase complex	18
CC	mitochondrial oxoglutarate dehydrogenase complex	3
CC	mitochondrial proton-transporting ATP synthase complex	20
CC	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	8
CC	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	4
CC	mitochondrial proton-transporting ATP synthase, stator stalk	1
CC	mitochondrial pyruvate dehydrogenase complex	12
CC	mitochondrial respirasome	30
CC	mitochondrial respiratory chain complex I	25
CC	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3
CC	mitochondrial ribosome	84
CC	mitochondrial small ribosomal subunit	49
CC	mitochondrion	2850
CC	mitotic checkpoint complex	1
CC	mitotic spindle	30
CC	mitotic spindle astral microtubule	6
CC	mitotic spindle midzone	20
CC	multi-eIF complex	3
CC	multivesicular body	12
CC	myofibril	5
CC	negative cofactor 2 complex	1
CC	nuclear MIS12/MIND complex	1
CC	nuclear RNA export factor complex	2
CC	nuclear body	24
CC	nuclear chromosome	812
CC	nuclear envelope	231
CC	nuclear exosome (RNase complex)	20
CC	nuclear inner membrane	24
CC	nuclear lumen	474
CC	nuclear membrane	112
CC	nuclear microtubule	2
CC	nuclear origin of replication recognition complex	15
CC	nuclear outer membrane	5
CC	nuclear outer membrane-endoplasmic reticulum membrane network	69
CC	nuclear periphery	51
CC	nuclear pore	60
CC	nuclear pore central transport channel	3
CC	nuclear pore cytoplasmic filaments	9
CC	nuclear pore nuclear basket	8
CC	nuclear pore transmembrane ring	1
CC	nuclear pre-replicative complex	7
CC	nuclear proteasome complex	4
CC	nuclear replication fork	78
CC	nucleoid	10
CC	nucleolus	680
CC	nucleoplasm	664
CC	nucleosome	24
CC	nucleotide-excision repair complex	12
CC	nucleotide-excision repair factor 1 complex	2
CC	nucleotide-excision repair factor 2 complex	1
CC	nucleotide-excision repair factor 3 complex	4
CC	nucleus	5820
CC	nucleus-vacuole junction	3
CC	oligosaccharyltransferase complex	15
CC	organelle inner membrane	59
CC	organelle membrane	525
CC	organelle membrane contact site	14
CC	origin recognition complex	3
CC	outer kinetochore	6
CC	outer membrane	54
CC	outer mitochondrial membrane protein complex	4
CC	oxidoreductase complex	38
CC	oxoglutarate dehydrogenase complex	6
CC	palmitoyltransferase complex	2
CC	peptidase complex	26
CC	pericentric heterochromatin	30
CC	perinuclear endoplasmic reticulum	12
CC	perinuclear endoplasmic reticulum lumen	1
CC	perinuclear endoplasmic reticulum membrane	2
CC	perinuclear region of cytoplasm	42
CC	peroxisomal importomer complex	2
CC	peroxisomal matrix	24
CC	peroxisomal membrane	42
CC	peroxisome	182
CC	phagocytic vesicle	5
CC	phagophore assembly site	30
CC	phenylalanine-tRNA ligase complex	4
CC	phosphatidylinositol 3-kinase complex	9
CC	phosphatidylinositol 3-kinase complex, class III	4
CC	phosphatidylinositol 3-kinase complex, class III, type I	1
CC	phosphatidylinositol 3-kinase complex, class III, type II	1
CC	phospholipid-translocating ATPase complex	2
CC	plasma membrane	1639
CC	plasma membrane bounded cell projection	27
CC	plasma membrane protein complex	10
CC	plasma membrane raft	5
CC	plus-end kinesin complex	1
CC	polar microtubule	2
CC	polysomal ribosome	3
CC	polysome	66
CC	post-mRNA release spliceosomal complex	15
CC	post-spliceosomal complex	2
CC	precatalytic spliceosome	2
CC	prefoldin complex	4
CC	preribosome	63
CC	preribosome, large subunit precursor	70
CC	preribosome, small subunit precursor	20
CC	procollagen-proline 4-dioxygenase complex	10
CC	proteasome accessory complex	20
CC	proteasome complex	105
CC	proteasome core complex	32
CC	proteasome core complex, alpha-subunit complex	12
CC	proteasome core complex, beta-subunit complex	10
CC	proteasome regulatory particle	40
CC	proteasome regulatory particle, base subcomplex	5
CC	proteasome regulatory particle, lid subcomplex	15
CC	proteasome storage granule	13
CC	protein farnesyltransferase complex	2
CC	protein kinase CK2 complex	3
CC	protein kinase complex	8
CC	protein phosphatase type 1 complex	15
CC	protein phosphatase type 2A complex	15
CC	protein serine/threonine phosphatase complex	14
CC	protein-DNA complex	92
CC	protein-containing complex	4734
CC	proton-transporting ATP synthase complex	8
CC	proton-transporting ATP synthase complex, catalytic core F(1)	2
CC	proton-transporting ATP synthase complex, coupling factor F(o)	4
CC	proton-transporting V-type ATPase complex	14
CC	proton-transporting V-type ATPase, V0 domain	3
CC	proton-transporting V-type ATPase, V1 domain	4
CC	proton-transporting two-sector ATPase complex	11
CC	proton-transporting two-sector ATPase complex, catalytic domain	6
CC	pyruvate dehydrogenase complex	9
CC	rDNA heterochromatin	15
CC	replication fork	112
CC	replication fork protection complex	12
CC	replisome	18
CC	respirasome	6
CC	respiratory chain complex I	5
CC	retromer complex	6
CC	retromer, cargo-selective complex	2
CC	ribonuclease MRP complex	3
CC	ribonucleoprotein complex	1432
CC	ribonucleoprotein granule	164
CC	ribonucleoside-diphosphate reductase complex	4
CC	ribosome	372
CC	rough endoplasmic reticulum	10
CC	rough endoplasmic reticulum membrane	6
CC	ruffle	7
CC	ruffle membrane	5
CC	sarcomere	7
CC	septin collar	2
CC	septin complex	4
CC	septin cytoskeleton	8
CC	septin ring	7
CC	serine C-palmitoyltransferase complex	2
CC	serine/threonine protein kinase complex	6
CC	signal recognition particle	3
CC	signal recognition particle receptor complex	3
CC	signal recognition particle, endoplasmic reticulum targeting	12
CC	site of DNA damage	64
CC	site of double-strand break	96
CC	site of polarized growth	49
CC	small nuclear ribonucleoprotein complex	52
CC	small ribosomal subunit	144
CC	small-subunit processome	48
CC	sno(s)RNA-containing ribonucleoprotein complex	25
CC	spindle	48
CC	spindle microtubule	15
CC	spindle midzone	20
CC	spindle pole	15
CC	spliceosomal complex	224
CC	spliceosomal snRNP complex	12
CC	spliceosomal tri-snRNP complex	4
CC	storage vacuole	100
CC	supramolecular fiber	9
CC	synaptonemal complex	6
CC	t-UTP complex	2
CC	tRNA (m1A) methyltransferase complex	2
CC	tRNA methyltransferase complex	4
CC	telomerase catalytic core complex	4
CC	telomerase holoenzyme complex	6
CC	trans-Golgi network	54
CC	trans-Golgi network transport vesicle	28
CC	trans-Golgi network transport vesicle membrane	12
CC	transcription elongation factor complex	30
CC	transcription export complex 2	2
CC	transcription factor AP-1 complex	2
CC	transcription factor TFIIA complex	3
CC	transcription factor TFIID complex	20
CC	transcription factor TFIIF complex	1
CC	transcription factor TFIIH core complex	6
CC	transcription factor TFIIH holo complex	12
CC	transcription factor TFIIIB complex	3
CC	transcription factor TFIIIC complex	4
CC	transcription factor TFIIK complex	2
CC	transcription preinitiation complex	2
CC	transcription regulator complex	162
CC	transcription repressor complex	5
CC	transcriptionally active chromatin	15
CC	transferase complex	276
CC	translation release factor complex	1
CC	transmembrane transporter complex	1
CC	transport vesicle	42
CC	transport vesicle membrane	20
CC	tricarboxylic acid cycle enzyme complex	3
CC	tubulin complex	1
CC	ubiquitin conjugating enzyme complex	4
CC	ubiquitin ligase complex	104
CC	vacuolar membrane	144
CC	vacuolar proton-transporting V-type ATPase complex	20
CC	vacuolar proton-transporting V-type ATPase, V0 domain	3
CC	vacuolar proton-transporting V-type ATPase, V1 domain	12
CC	vacuole	515
CC	vesicle	336
CC	vesicle coat	6
CC	vesicle membrane	42
CC	vesicle tethering complex	7
MF	(R)-2-hydroxyglutarate dehydrogenase activity	3
MF	(R,R)-butanediol dehydrogenase activity	1
MF	1-phosphatidylinositol 4-kinase activity	8
MF	1-phosphatidylinositol-3-kinase activity	5
MF	1-phosphatidylinositol-3-phosphate 5-kinase activity	3
MF	1-pyrroline-5-carboxylate dehydrogenase activity	1
MF	2 iron, 2 sulfur cluster binding	8
MF	2-aminoadipate transaminase activity	1
MF	2-oxoglutarate-dependent dioxygenase activity	35
MF	2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity	1
MF	3'-5' DNA helicase activity	10
MF	3'-5' exonuclease activity	40
MF	3'-5'-exodeoxyribonuclease activity	12
MF	3'-5'-exoribonuclease activity	35
MF	3'-flap-structured DNA binding	1
MF	3'-tRNA processing endoribonuclease activity	1
MF	3'-tyrosyl-DNA phosphodiesterase activity	2
MF	3-hydroxyacyl-CoA dehydratase activity	3
MF	3-hydroxyacyl-CoA dehydrogenase activity	5
MF	3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity	1
MF	3-phosphoinositide-dependent protein kinase activity	1
MF	4 iron, 4 sulfur cluster binding	10
MF	4-aminobutyrate transaminase activity	1
MF	4-hydroxybenzoate octaprenyltransferase activity	1
MF	5'-3' DNA helicase activity	12
MF	5'-3' DNA/RNA helicase activity	2
MF	5'-3' RNA helicase activity	1
MF	5'-3' RNA polymerase activity	10
MF	5'-3' exodeoxyribonuclease activity	6
MF	5'-3' exonuclease activity	20
MF	5'-3' exoribonuclease activity	8
MF	5'-flap endonuclease activity	4
MF	5S rRNA binding	8
MF	6-phosphofructo-2-kinase activity	4
MF	6-phosphofructokinase activity	10
MF	6-phosphogluconolactonase activity	4
MF	7S RNA binding	10
MF	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity	2
MF	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity	2
MF	8-oxo-dGDP phosphatase activity	3
MF	ABC-type oligopeptide transporter activity	1
MF	ABC-type peptide transporter activity	2
MF	ADP transmembrane transporter activity	8
MF	AMP binding	10
MF	ATP binding	560
MF	ATP hydrolysis activity	595
MF	ATP transmembrane transporter activity	10
MF	ATP-dependent activity, acting on DNA	102
MF	ATP-dependent activity, acting on RNA	36
MF	ATP-dependent peptidase activity	4
MF	ATP:ADP antiporter activity	8
MF	ATPase activator activity	54
MF	ATPase binding	5
MF	ATPase regulator activity	24
MF	ATPase-coupled cation transmembrane transporter activity	63
MF	ATPase-coupled ion transmembrane transporter activity	20
MF	ATPase-coupled transmembrane transporter activity	85
MF	Atg8 ligase activity	2
MF	C-8 sterol isomerase activity	2
MF	CTP synthase activity	4
MF	CoA hydrolase activity	1
MF	CoA-ligase activity	4
MF	D-erythro-sphingosine kinase activity	3
MF	D-lactate dehydrogenase (cytochrome) activity	2
MF	D-loop DNA binding	1
MF	D-serine ammonia-lyase activity	1
MF	DNA 5'-adenosine monophosphate hydrolase activity	2
MF	DNA N-glycosylase activity	12
MF	DNA binding	1000
MF	DNA binding, bending	6
MF	DNA clamp unloader activity	4
MF	DNA helicase activity	63
MF	DNA insertion or deletion binding	2
MF	DNA ligase (ATP) activity	2
MF	DNA ligase activity	3
MF	DNA primase activity	3
MF	DNA replication origin binding	55
MF	DNA secondary structure binding	6
MF	DNA strand exchange activity	2
MF	DNA topoisomerase activity	3
MF	DNA topoisomerase type I (single strand cut, ATP-independent) activity	8
MF	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	3
MF	DNA translocase activity	6
MF	DNA-(apurinic or apyrimidinic site) endonuclease activity	6
MF	DNA-3'-diphospho-5'-guanosine diphosphatase	1
MF	DNA-binding transcription activator activity, RNA polymerase II-specific	40
MF	DNA-binding transcription factor activity	216
MF	DNA-binding transcription factor activity, RNA polymerase II-specific	126
MF	DNA-binding transcription repressor activity, RNA polymerase II-specific	8
MF	DNA-directed 5'-3' RNA polymerase activity	25
MF	DNA-directed DNA polymerase activity	36
MF	DNA/RNA helicase activity	1
MF	FAD binding	8
MF	FAD transmembrane transporter activity	4
MF	FK506 binding	5
MF	FMN adenylyltransferase activity	2
MF	FMN binding	15
MF	G-protein alpha-subunit binding	12
MF	G-protein beta/gamma-subunit complex binding	3
MF	G-quadruplex DNA binding	4
MF	GDP binding	6
MF	GDP-dissociation inhibitor activity	24
MF	GMP binding	3
MF	GMP synthase (glutamine-hydrolyzing) activity	2
MF	GMP synthase activity	2
MF	GPI-anchor transamidase activity	4
MF	GTP binding	175
MF	GTPase activating protein binding	5
MF	GTPase activator activity	90
MF	GTPase activity	216
MF	GTPase binding	57
MF	GTPase regulator activity	84
MF	H3 histone acetyltransferase activity	1
MF	H4 histone acetyltransferase activity	2
MF	Hsp70 protein binding	35
MF	Hsp90 protein binding	6
MF	IgE binding	6
MF	L-amino acid transmembrane transporter activity	28
MF	L-arginine transmembrane transporter activity	9
MF	L-aspartate transmembrane transporter activity	4
MF	L-aspartate:2-oxoglutarate aminotransferase activity	3
MF	L-glutamate transmembrane transporter activity	3
MF	L-histidine transmembrane transporter activity	8
MF	L-isoleucine transaminase activity	1
MF	L-leucine transaminase activity	1
MF	L-lysine transmembrane transporter activity	4
MF	L-methionine transmembrane transporter activity	1
MF	L-methionine-(S)-S-oxide reductase activity	1
MF	L-serine ammonia-lyase activity	3
MF	L-serine transmembrane transporter activity	6
MF	L-threonine ammonia-lyase activity	1
MF	L-tyrosine transmembrane transporter activity	1
MF	L-valine transaminase activity	1
MF	Lys48-specific deubiquitinase activity	6
MF	MAP kinase kinase kinase activity	8
MF	MAP kinase kinase kinase kinase activity	3
MF	MAP kinase phosphatase activity	4
MF	MAP kinase serine/threonine phosphatase activity	1
MF	MCM complex binding	1
MF	N,N-dimethylaniline monooxygenase activity	4
MF	N-acetylglucosaminylphosphatidylinositol deacetylase activity	3
MF	N-acetyltransferase activity	48
MF	N-acyltransferase activity	18
MF	N-methyltransferase activity	48
MF	N-terminal protein N-methyltransferase activity	2
MF	NAD binding	5
MF	NAD(P)H dehydrogenase (quinone) activity	4
MF	NAD(P)H oxidase H2O2-forming activity	5
MF	NAD+ binding	5
MF	NAD+ kinase activity	3
MF	NAD+ synthase (glutamine-hydrolyzing) activity	2
MF	NADH dehydrogenase (quinone) activity	5
MF	NADH dehydrogenase (ubiquinone) activity	20
MF	NADH dehydrogenase activity	30
MF	NADP binding	14
MF	NADPH-hemoprotein reductase activity	6
MF	NEDD8 activating enzyme activity	2
MF	NEDD8-specific protease activity	6
MF	O-acyltransferase activity	20
MF	O-methyltransferase activity	12
MF	O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2
MF	P-type divalent copper transporter activity	5
MF	P-type ion transporter activity	10
MF	RNA binding	1314
MF	RNA guanylyltransferase activity	2
MF	RNA helicase activity	126
MF	RNA lariat debranching enzyme activity	2
MF	RNA methyltransferase activity	60
MF	RNA polymerase I core binding	3
MF	RNA polymerase I general transcription initiation factor activity	2
MF	RNA polymerase I general transcription initiation factor binding	1
MF	RNA polymerase II C-terminal domain binding	4
MF	RNA polymerase II C-terminal domain phosphoserine binding	2
MF	RNA polymerase II CTD heptapeptide repeat phosphatase activity	6
MF	RNA polymerase II cis-regulatory region sequence-specific DNA binding	35
MF	RNA polymerase II complex binding	10
MF	RNA polymerase II core promoter sequence-specific DNA binding	4
MF	RNA polymerase II general transcription initiation factor binding	2
MF	RNA polymerase II transcription regulatory region sequence-specific DNA binding	48
MF	RNA polymerase II-specific DNA-binding transcription factor binding	7
MF	RNA polymerase III core binding	1
MF	RNA polymerase III general transcription initiation factor activity	5
MF	RNA polymerase III transcription regulatory region sequence-specific DNA binding	1
MF	RNA polymerase III type 3 promoter sequence-specific DNA binding	2
MF	RNA polymerase binding	20
MF	RNA polymerase core enzyme binding	8
MF	RNA strand annealing activity	2
MF	RNA-DNA hybrid ribonuclease activity	16
MF	RNA-directed DNA polymerase activity	3
MF	Rho GDP-dissociation inhibitor activity	2
MF	S-(hydroxymethyl)glutathione dehydrogenase activity	2
MF	S-adenosyl-L-methionine transmembrane transporter activity	6
MF	S-adenosylmethionine-dependent methyltransferase activity	96
MF	S-methyl-5-thioadenosine phosphorylase activity	2
MF	S-methyltransferase activity	1
MF	SH3 domain binding	7
MF	SNAP receptor activity	12
MF	SNARE binding	32
MF	SUMO binding	10
MF	SUMO ligase activity	3
MF	SUMO transferase activity	6
MF	TBP-class protein binding	25
MF	TFIIH-class transcription factor complex binding	2
MF	TFIIIC-class transcription factor complex binding	2
MF	U1 snRNA binding	2
MF	U1 snRNP binding	1
MF	U2 snRNA binding	3
MF	U2 snRNP binding	1
MF	U3 snoRNA binding	4
MF	U4 snRNA binding	3
MF	U5 snRNA binding	1
MF	U6 snRNA binding	12
MF	UDP-N-acetylglucosamine diphosphorylase activity	1
MF	UDP-galactose transmembrane transporter activity	2
MF	UDP-glucose transmembrane transporter activity	1
MF	UDP-glucose:glycoprotein glucosyltransferase activity	4
MF	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	4
MF	UDP-glucosyltransferase activity	9
MF	UDP-glycosyltransferase activity	18
MF	Y-form DNA binding	6
MF	[acyl-carrier-protein] S-acetyltransferase activity	1
MF	[acyl-carrier-protein] S-malonyltransferase activity	4
MF	[pyruvate dehydrogenase (lipoamide)] phosphatase activity	1
MF	acetate-CoA ligase activity	5
MF	acetyl-CoA C-acyltransferase activity	6
MF	acetyl-CoA:L-glutamate N-acetyltransferase activity	4
MF	acetylglucosaminyltransferase activity	12
MF	acetyltransferase activator activity	4
MF	acetyltransferase activity	91
MF	acid-amino acid ligase activity	4
MF	acid-thiol ligase activity	4
MF	acidic amino acid transmembrane transporter activity	1
MF	acireductone dioxygenase [iron(II)-requiring] activity	1
MF	actin binding	88
MF	actin filament binding	56
MF	actin monomer binding	7
MF	acyl-CoA hydrolase activity	5
MF	acylglycerol lipase activity	4
MF	acylglycerone-phosphate reductase activity	2
MF	acyltransferase activity	105
MF	acyltransferase activity, transferring groups other than amino-acyl groups	54
MF	adenine nucleotide transmembrane transporter activity	6
MF	adenosine deaminase activity	10
MF	adenosylhomocysteinase activity	2
MF	adenyl nucleotide binding	74
MF	adenyl-nucleotide exchange factor activity	6
MF	adenylate cyclase activity	14
MF	adenylate cyclase binding	4
MF	adenylate kinase activity	8
MF	adenylylsulfate kinase activity	3
MF	adenylyltransferase activity	2
MF	alanine-glyoxylate transaminase activity	3
MF	alcohol binding	4
MF	alcohol dehydrogenase (NAD+) activity	9
MF	alcohol dehydrogenase [NAD(P)+] activity	2
MF	aldehyde dehydrogenase (NAD+) activity	25
MF	alpha-1,2-mannosyltransferase activity	3
MF	alpha-1,6-mannosyltransferase activity	2
MF	alpha-mannosidase activity	2
MF	amide binding	34
MF	amide transmembrane transporter activity	10
MF	amidophosphoribosyltransferase activity	1
MF	amino acid binding	8
MF	amino acid kinase activity	3
MF	amino acid transmembrane transporter activity	54
MF	aminoacyl-tRNA editing activity	6
MF	aminopeptidase activity	32
MF	ammonia-lyase activity	2
MF	ammonium transmembrane transporter activity	45
MF	anaphase-promoting complex binding	3
MF	anion channel activity	6
MF	anion transmembrane transporter activity	74
MF	anion:anion antiporter activity	12
MF	anion:cation symporter activity	2
MF	antioxidant activity	90
MF	antiporter activity	70
MF	arginine binding	6
MF	arginine transmembrane transporter activity	12
MF	arginine-tRNA ligase activity	4
MF	aromatic amino acid transmembrane transporter activity	2
MF	arsenite transmembrane transporter activity	1
MF	arylsulfatase activity	4
MF	asparaginase activity	4
MF	asparagine synthase (glutamine-hydrolyzing) activity	6
MF	asparagine-tRNA ligase activity	8
MF	aspartate-tRNA ligase activity	2
MF	aspartic endopeptidase activity, intramembrane cleaving	5
MF	aspartic-type endopeptidase activity	48
MF	aspartic-type peptidase activity	8
MF	azole transmembrane transporter activity	10
MF	basal RNA polymerase II transcription machinery binding	6
MF	basic amino acid transmembrane transporter activity	20
MF	beta-glucosidase activity	6
MF	biotin-[acetyl-CoA-carboxylase] ligase activity	1
MF	biotin-protein ligase activity	3
MF	branched-chain-amino-acid transaminase activity	1
MF	bubble DNA binding	3
MF	cAMP-dependent protein kinase inhibitor activity	3
MF	calcium channel activity	14
MF	calcium ion binding	88
MF	calcium ion transmembrane transporter activity	12
MF	calcium-dependent cysteine-type endopeptidase activity	6
MF	calcium:cation antiporter activity	1
MF	calcium:proton antiporter activity	1
MF	calmodulin binding	9
MF	carbamoyl-phosphate synthase (ammonia) activity	2
MF	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	2
MF	carbohydrate binding	21
MF	carbohydrate derivative binding	309
MF	carbohydrate kinase activity	10
MF	carbohydrate transmembrane transporter activity	2
MF	carbohydrate:proton symporter activity	4
MF	carbon-carbon lyase activity	10
MF	carbon-sulfur lyase activity	8
MF	carbonate dehydratase activity	3
MF	carbonyl reductase (NADPH) activity	6
MF	carboxy-lyase activity	12
MF	carboxylic acid binding	4
MF	carboxylic acid transmembrane transporter activity	60
MF	carboxylic ester hydrolase activity	65
MF	carboxypeptidase activity	6
MF	cargo receptor activity	6
MF	carnitine O-acetyltransferase activity	3
MF	catalytic activity	2384
MF	cation binding	112
MF	cation channel activity	21
MF	cation transmembrane transporter activity	164
MF	cation:cation antiporter activity	4
MF	cation:chloride symporter activity	4
MF	cell adhesion molecule binding	40
MF	centromeric DNA binding	4
MF	channel activity	30
MF	channel regulator activity	3
MF	chaperone binding	36
MF	chitin binding	8
MF	chitinase activity	8
MF	chloride channel activity	12
MF	chloride transmembrane transporter activity	20
MF	cholesterol binding	10
MF	chromatin DNA binding	20
MF	chromatin binding	252
MF	cis-regulatory region sequence-specific DNA binding	42
MF	cis-trans isomerase activity	4
MF	clathrin binding	15
MF	copper ion binding	14
MF	copper ion transmembrane transporter activity	5
MF	core promoter sequence-specific DNA binding	8
MF	cyclin binding	5
MF	cyclin-dependent protein kinase activating kinase activity	1
MF	cyclin-dependent protein serine/threonine kinase activator activity	10
MF	cyclin-dependent protein serine/threonine kinase inhibitor activity	6
MF	cyclin-dependent protein serine/threonine kinase regulator activity	21
MF	cystathionine gamma-lyase activity	4
MF	cysteine desulfurase activity	3
MF	cysteine-tRNA ligase activity	2
MF	cysteine-type endopeptidase activity	16
MF	cysteine-type peptidase activity	77
MF	cytidine deaminase activity	5
MF	cytoskeletal anchor activity	6
MF	cytoskeletal motor activity	20
MF	cytoskeletal protein binding	147
MF	dITP diphosphatase activity	2
MF	dTDP-glucose 4,6-dehydratase activity	1
MF	dUTP diphosphatase activity	1
MF	damaged DNA binding	56
MF	deacetylase activity	4
MF	deaminase activity	6
MF	demethylase activity	10
MF	deoxycytidyl transferase activity	2
MF	deoxyribonuclease activity	36
MF	deubiquitinase activity	40
MF	diacylglycerol binding	7
MF	diacylglycerol kinase activity	5
MF	dicarboxylic acid transmembrane transporter activity	2
MF	dihydrolipoyl dehydrogenase activity	2
MF	dihydrolipoyllysine-residue succinyltransferase activity	2
MF	dihydroorotate dehydrogenase activity	1
MF	dinucleotide insertion or deletion binding	1
MF	dioxygenase activity	8
MF	dipeptidase activity	5
MF	dipeptide transmembrane transporter activity	6
MF	diphthine methylesterase activity	1
MF	diphthine synthase activity	2
MF	disulfide oxidoreductase activity	48
MF	dodecenoyl-CoA delta-isomerase activity	3
MF	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6
MF	dolichyl-phosphate-mannose-protein mannosyltransferase activity	6
MF	dolichyldiphosphatase activity	3
MF	double-strand/single-strand DNA junction binding	2
MF	double-stranded DNA 3'-5' exodeoxyribonuclease activity	1
MF	double-stranded DNA binding	301
MF	double-stranded DNA exodeoxyribonuclease activity	2
MF	double-stranded DNA helicase activity	2
MF	double-stranded RNA binding	7
MF	efflux transmembrane transporter activity	5
MF	electron transfer activity	20
MF	endochitinase activity	1
MF	endodeoxyribonuclease activity	20
MF	endodeoxyribonuclease activity, producing 5'-phosphomonoesters	1
MF	endonuclease activity	105
MF	endopeptidase activator activity	10
MF	endopeptidase activity	243
MF	endopeptidase regulator activity	2
MF	endoplasmic reticulum signal peptide binding	3
MF	endoribonuclease activity	70
MF	endoribonuclease activity, producing 5'-phosphomonoesters	12
MF	enoyl-CoA hydratase activity	12
MF	enzyme activator activity	258
MF	enzyme binding	301
MF	enzyme inhibitor activity	54
MF	enzyme regulator activity	335
MF	estradiol binding	2
MF	eukaryotic initiation factor 4G binding	1
MF	exonuclease activity	75
MF	exopeptidase activity	12
MF	exoribonuclease activity	21
MF	exoribonuclease activity, producing 5'-phosphomonoesters	7
MF	extracellular matrix binding	7
MF	farnesyl-diphosphate farnesyltransferase activity	1
MF	farnesyltranstransferase activity	6
MF	fatty acid alpha-hydroxylase activity	4
MF	fatty acid ligase activity	2
MF	fatty acid synthase activity	2
MF	fatty-acyl-CoA binding	4
MF	fatty-acyl-CoA synthase activity	1
MF	ferric-chelate reductase activity	1
MF	ferrochelatase activity	2
MF	ferrous iron binding	30
MF	ferroxidase activity	5
MF	fibronectin binding	6
MF	flap endonuclease activity	1
MF	flap-structured DNA binding	2
MF	flavin adenine dinucleotide binding	49
MF	flavin-linked sulfhydryl oxidase activity	2
MF	four-way junction DNA binding	6
MF	fructose 1,6-bisphosphate 1-phosphatase activity	3
MF	fructose transmembrane transporter activity	4
MF	fructose-2,6-bisphosphate 2-phosphatase activity	3
MF	fructose-6-phosphate binding	6
MF	galactokinase activity	4
MF	galactose transmembrane transporter activity	1
MF	galactosyltransferase activity	5
MF	gamma-tubulin binding	5
MF	general transcription initiation factor activity	2
MF	gluconolactonase activity	2
MF	glucose transmembrane transporter activity	12
MF	glucosidase activity	9
MF	glucosyltransferase activity	9
MF	glucuronosyltransferase activity	6
MF	glutamate 5-kinase activity	2
MF	glutamate decarboxylase activity	2
MF	glutamate-5-semialdehyde dehydrogenase activity	3
MF	glutaminase activity	9
MF	glutamine-tRNA ligase activity	3
MF	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4
MF	glutathione binding	4
MF	glutathione disulfide oxidoreductase activity	4
MF	glutathione peroxidase activity	20
MF	glutathione synthase activity	1
MF	glutathione transferase activity	35
MF	glutathione-disulfide reductase (NADPH) activity	4
MF	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	4
MF	glycerol kinase activity	4
MF	glycerol-3-phosphate O-acyltransferase activity	12
MF	glycerone-phosphate O-acyltransferase activity	6
MF	glycine dehydrogenase (decarboxylating) activity	2
MF	glycine hydroxymethyltransferase activity	2
MF	glycosyltransferase activity	72
MF	guanine/thymine mispair binding	4
MF	guanyl ribonucleotide binding	26
MF	guanyl-nucleotide exchange factor activity	72
MF	guanylate kinase activity	6
MF	guanylyltransferase activity	2
MF	heat shock protein binding	40
MF	helicase activity	104
MF	heme binding	40
MF	heme oxygenase (decyclizing) activity	3
MF	heterocyclic compound binding	328
MF	heteroduplex DNA loop binding	1
MF	hexaprenyldihydroxybenzoate methyltransferase activity	1
MF	hexose transmembrane transporter activity	2
MF	hexosyltransferase activity	24
MF	histone H3-methyl-lysine-36 demethylase activity	4
MF	histone acetyltransferase activity	21
MF	histone acetyltransferase activity (H4-K12 specific)	1
MF	histone acetyltransferase activity (H4-K5 specific)	2
MF	histone acetyltransferase activity (H4-K8 specific)	1
MF	histone binding	171
MF	histone demethylase activity	4
MF	histone kinase activity	2
MF	histone methyltransferase activity	12
MF	histone methyltransferase activity (H3-K79 specific)	1
MF	histone serine kinase activity	4
MF	histone-arginine N-methyltransferase activity	5
MF	histone-glutamine methyltransferase activity	2
MF	histone-lysine N-methyltransferase activity	14
MF	holocytochrome-c synthase activity	2
MF	hormone binding	8
MF	hydro-lyase activity	28
MF	hydrolase activity	1778
MF	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	230
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	20
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	4
MF	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	24
MF	hydrolase activity, acting on ester bonds	360
MF	hydrolase activity, acting on glycosyl bonds	45
MF	hydrolase activity, hydrolyzing N-glycosyl compounds	3
MF	hydrolase activity, hydrolyzing O-glycosyl compounds	48
MF	hydroxyacylglutathione hydrolase activity	2
MF	hydroxymethyl-, formyl- and related transferase activity	1
MF	hydroxymethylglutaryl-CoA reductase (NADPH) activity	2
MF	identical protein binding	88
MF	immunoglobulin binding	2
MF	inorganic cation transmembrane transporter activity	87
MF	inorganic phosphate transmembrane transporter activity	12
MF	inositol pentakisphosphate 2-kinase activity	3
MF	inositol tetrakisphosphate 3-kinase activity	1
MF	inositol tetrakisphosphate 6-kinase activity	2
MF	inositol tetrakisphosphate kinase activity	1
MF	inositol-1,3,4,5,6-pentakisphosphate kinase activity	3
MF	inositol-1,4,5-trisphosphate 3-kinase activity	4
MF	inositol-1,4,5-trisphosphate 6-kinase activity	1
MF	inositol-3-phosphate synthase activity	2
MF	integrin binding	45
MF	intramolecular oxidoreductase activity, transposing C=C bonds	3
MF	intramolecular transferase activity, phosphotransferases	2
MF	ion channel activity	36
MF	ion gated channel activity	3
MF	ion transmembrane transporter activity	305
MF	iron ion binding	54
MF	iron ion transmembrane transporter activity	12
MF	iron-sulfur cluster binding	20
MF	isoleucine-tRNA ligase activity	3
MF	isomerase activity	84
MF	isopentenyl-diphosphate delta-isomerase activity	2
MF	kinase activator activity	20
MF	kinase activity	424
MF	kinase binding	36
MF	kinase inhibitor activity	12
MF	kinase regulator activity	30
MF	kynurenine 3-monooxygenase activity	3
MF	kynurenine-oxoglutarate transaminase activity	4
MF	laminin binding	7
MF	lanosterol synthase activity	4
MF	large ribosomal subunit rRNA binding	2
MF	leak channel activity	3
MF	leucine-tRNA ligase activity	3
MF	ligase activity	76
MF	ligase activity, forming carbon-nitrogen bonds	17
MF	lipase activity	44
MF	lipid binding	196
MF	lipid transporter activity	40
MF	lipoate synthase activity	2
MF	long-chain fatty acid transporter activity	8
MF	long-chain fatty acid-CoA ligase activity	7
MF	long-chain fatty acyl-CoA binding	2
MF	lyase activity	84
MF	lysine N-methyltransferase activity	14
MF	lysine-acetylated histone binding	6
MF	lysophospholipase activity	24
MF	mRNA 3'-UTR binding	7
MF	mRNA 5'-UTR binding	4
MF	mRNA binding	392
MF	mRNA guanylyltransferase activity	2
MF	macrolide binding	1
MF	magnesium ion binding	63
MF	manganese ion binding	24
MF	manganese ion transmembrane transporter activity	24
MF	mannose binding	6
MF	mannosidase activity	1
MF	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	4
MF	mannosyltransferase activity	24
MF	medium-chain fatty acid-CoA ligase activity	3
MF	membrane insertase activity	4
MF	metal ion binding	424
MF	metal ion transmembrane transporter activity	45
MF	metal ion:proton antiporter activity	3
MF	metalloaminopeptidase activity	12
MF	metalloendopeptidase activity	72
MF	metalloexopeptidase activity	8
MF	metallopeptidase activity	112
MF	methionine adenosyltransferase activity	2
MF	methionine synthase activity	3
MF	methionine-tRNA ligase activity	3
MF	methylated histone binding	35
MF	methylenetetrahydrofolate reductase (NAD(P)H) activity	4
MF	methylthioribulose 1-phosphate dehydratase activity	2
MF	methyltransferase activity	174
MF	microtubule binding	70
MF	microtubule motor activity	24
MF	microtubule plus-end binding	12
MF	minus-end-directed microtubule motor activity	4
MF	misfolded protein binding	7
MF	mismatched DNA binding	12
MF	mitochondrial ribosome binding	4
MF	mitochondrion targeting sequence binding	9
MF	mitogen-activated protein kinase binding	5
MF	modification-dependent protein binding	20
MF	modified amino acid binding	2
MF	molecular adaptor activity	104
MF	molecular_function	1021
MF	monocarboxylic acid transmembrane transporter activity	40
MF	monooxygenase activity	24
MF	monosaccharide binding	8
MF	monovalent cation:proton antiporter activity	2
MF	neurotransmitter transmembrane transporter activity	7
MF	neutral amino acid transmembrane transporter activity	14
MF	nicotinamide N-methyltransferase activity	4
MF	nicotinate phosphoribosyltransferase activity	2
MF	nuclear export signal receptor activity	8
MF	nuclear import signal receptor activity	15
MF	nuclear localization sequence binding	15
MF	nuclease activity	145
MF	nucleic acid binding	1410
MF	nucleobase transmembrane transporter activity	1
MF	nucleoside binding	26
MF	nucleoside diphosphate kinase activity	6
MF	nucleoside monophosphate kinase activity	12
MF	nucleoside transmembrane transporter activity	2
MF	nucleoside-diphosphatase activity	3
MF	nucleoside-triphosphatase activity	440
MF	nucleoside-triphosphate diphosphatase activity	6
MF	nucleosomal DNA binding	10
MF	nucleosomal histone binding	3
MF	nucleosome binding	35
MF	nucleotide binding	660
MF	nucleotide diphosphatase activity	3
MF	nucleotide-sugar transmembrane transporter activity	6
MF	nucleotidyltransferase activity	95
MF	oleoyl-CoA ligase activity	2
MF	oligosaccharyl transferase activity	1
MF	organic acid binding	4
MF	organic acid transmembrane transporter activity	20
MF	organic anion transmembrane transporter activity	135
MF	organic cation transmembrane transporter activity	15
MF	organic cyclic compound binding	664
MF	ornithine-oxo-acid transaminase activity	1
MF	orotate phosphoribosyltransferase activity	2
MF	osmosensor activity	1
MF	oxidized purine nucleobase lesion DNA N-glycosylase activity	2
MF	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	2
MF	oxidoreductase activity	465
MF	oxidoreductase activity, acting on NAD(P)H	60
MF	oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor	4
MF	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	14
MF	oxidoreductase activity, acting on a sulfur group of donors	64
MF	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8
MF	oxidoreductase activity, acting on metal ions	4
MF	oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor	2
MF	oxidoreductase activity, acting on other nitrogenous compounds as donors	2
MF	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	13
MF	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	16
MF	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1
MF	oxidoreductase activity, acting on peroxide as acceptor	24
MF	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	1
MF	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3
MF	oxidoreductase activity, acting on the CH-CH group of donors	21
MF	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	12
MF	oxidoreductase activity, acting on the CH-NH group of donors	2
MF	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	105
MF	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	24
MF	oxoglutarate dehydrogenase (succinyl-transferring) activity	8
MF	oxygen-dependent protoporphyrinogen oxidase activity	2
MF	oxysterol binding	5
MF	palmitoyl hydrolase activity	4
MF	palmitoyl-(protein) hydrolase activity	12
MF	palmitoyl-CoA ligase activity	2
MF	palmitoyltransferase activity	10
MF	passive transmembrane transporter activity	6
MF	pentose transmembrane transporter activity	1
MF	peptidase activator activity	10
MF	peptidase activity	344
MF	peptide N-acetyltransferase activity	5
MF	peptide alpha-N-acetyltransferase activity	6
MF	peptide binding	80
MF	peptide transmembrane transporter activity	27
MF	peptide-glutamate-N-acetyltransferase activity	1
MF	peptide-lysine-N-acetyltransferase activity	6
MF	peptide-methionine (S)-S-oxide reductase activity	3
MF	peptide-serine-N-acetyltransferase activity	2
MF	peptidyl-proline 4-dioxygenase activity	10
MF	peptidyl-proline dioxygenase activity	15
MF	peptidyl-prolyl cis-trans isomerase activity	32
MF	peptidyltransferase activity	4
MF	peroxidase activity	56
MF	peroxiredoxin activity	3
MF	peroxisome matrix targeting signal-1 binding	3
MF	peroxisome targeting sequence binding	3
MF	phenylalanine-tRNA ligase activity	12
MF	phosphatase activator activity	12
MF	phosphatase activity	95
MF	phosphatase binding	12
MF	phosphatase inhibitor activity	8
MF	phosphatase regulator activity	55
MF	phosphate ion transmembrane transporter activity	3
MF	phosphatidate phosphatase activity	6
MF	phosphatidic acid binding	4
MF	phosphatidylethanolamine binding	4
MF	phosphatidylinositol 3-kinase activity	4
MF	phosphatidylinositol binding	78
MF	phosphatidylinositol bisphosphate binding	12
MF	phosphatidylinositol bisphosphate phosphatase activity	1
MF	phosphatidylinositol deacylase activity	2
MF	phosphatidylinositol kinase activity	3
MF	phosphatidylinositol phosphate 5-phosphatase activity	3
MF	phosphatidylinositol phosphate binding	60
MF	phosphatidylinositol phosphate kinase activity	2
MF	phosphatidylinositol transfer activity	10
MF	phosphatidylinositol-3,4,5-trisphosphate binding	6
MF	phosphatidylinositol-3,5-bisphosphate binding	4
MF	phosphatidylinositol-3-phosphatase activity	5
MF	phosphatidylinositol-3-phosphate binding	30
MF	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6
MF	phosphatidylinositol-4,5-bisphosphate binding	14
MF	phosphatidylinositol-4-phosphate binding	12
MF	phosphatidylinositol-5-phosphate binding	5
MF	phosphatidylserine binding	6
MF	phosphoglucomutase activity	8
MF	phosphogluconate dehydrogenase (decarboxylating) activity	2
MF	phospholipase A2 activity	6
MF	phospholipase activity	16
MF	phospholipid binding	171
MF	phospholipid transporter activity	28
MF	phosphomevalonate kinase activity	3
MF	phosphopantothenate--cysteine ligase activity	3
MF	phosphopentomutase activity	1
MF	phosphoprotein binding	15
MF	phosphoprotein phosphatase activity	60
MF	phosphoribosylaminoimidazole carboxylase activity	1
MF	phosphoric diester hydrolase activity	5
MF	phosphorus-oxygen lyase activity	2
MF	phosphoserine residue binding	8
MF	phosphotransferase activity, alcohol group as acceptor	132
MF	plus-end-directed microtubule motor activity	8
MF	poly(A) binding	6
MF	poly(U) RNA binding	5
MF	poly-pyrimidine tract binding	2
MF	polydeoxyribonucleotide 5'-hydroxyl-kinase activity	3
MF	polydeoxyribonucleotide kinase activity	1
MF	polynucleotide 5'-hydroxyl-kinase activity	2
MF	polyprenyltransferase activity	1
MF	polysome binding	2
MF	polyubiquitin modification-dependent protein binding	18
MF	potassium channel activity	7
MF	potassium ion leak channel activity	3
MF	potassium ion transmembrane transporter activity	10
MF	potassium:chloride symporter activity	6
MF	potassium:proton antiporter activity	4
MF	pre-mRNA binding	15
MF	pre-mRNA branch point binding	1
MF	pre-mRNA intronic binding	4
MF	prenyltransferase activity	16
MF	procollagen-proline 4-dioxygenase activity	10
MF	proline-tRNA ligase activity	3
MF	promoter-specific chromatin binding	10
MF	proteasome binding	5
MF	proteasome-activating activity	15
MF	protein C-terminal methylesterase activity	2
MF	protein C-terminus binding	6
MF	protein N-terminus binding	4
MF	protein binding	1000
MF	protein dimerization activity	70
MF	protein disulfide isomerase activity	42
MF	protein domain specific binding	20
MF	protein farnesyltransferase activity	2
MF	protein folding chaperone	36
MF	protein heterodimerization activity	42
MF	protein histidine kinase activity	2
MF	protein homodimerization activity	49
MF	protein kinase C activity	4
MF	protein kinase C binding	6
MF	protein kinase activator activity	28
MF	protein kinase activity	192
MF	protein kinase binding	36
MF	protein kinase inhibitor activity	18
MF	protein kinase regulator activity	50
MF	protein methylesterase activity	1
MF	protein methyltransferase activity	60
MF	protein phosphatase 1 binding	14
MF	protein phosphatase activator activity	12
MF	protein phosphatase binding	12
MF	protein phosphatase inhibitor activity	24
MF	protein phosphatase regulator activity	80
MF	protein phosphorylated amino acid binding	4
MF	protein prenyltransferase activity	1
MF	protein serine/threonine kinase activator activity	12
MF	protein serine/threonine kinase activity	171
MF	protein serine/threonine kinase inhibitor activity	12
MF	protein serine/threonine phosphatase activity	49
MF	protein serine/threonine phosphatase inhibitor activity	6
MF	protein serine/threonine/tyrosine kinase activity	4
MF	protein tag	4
MF	protein transmembrane transporter activity	24
MF	protein tyrosine kinase activity	18
MF	protein tyrosine phosphatase activity	24
MF	protein-arginine N-methyltransferase activity	6
MF	protein-arginine omega-N monomethyltransferase activity	2
MF	protein-arginine omega-N symmetric methyltransferase activity	4
MF	protein-containing complex binding	322
MF	protein-disulfide reductase (NAD(P)) activity	6
MF	protein-disulfide reductase activity	63
MF	protein-glutamine N-methyltransferase activity	2
MF	protein-lysine N-methyltransferase activity	28
MF	protein-macromolecule adaptor activity	130
MF	protein-membrane adaptor activity	6
MF	protein-transporting ATPase activity	4
MF	proton transmembrane transporter activity	90
MF	proton-transporting ATPase activity, rotational mechanism	35
MF	pseudouridine synthase activity	4
MF	purine nucleoside binding	52
MF	purine nucleotide binding	198
MF	purine nucleotide transmembrane transporter activity	9
MF	purine ribonucleoside triphosphate binding	94
MF	purine ribonucleotide binding	98
MF	purine-nucleoside phosphorylase activity	2
MF	pyridoxal kinase activity	3
MF	pyridoxal phosphate binding	24
MF	pyrimidine nucleotide-sugar transmembrane transporter activity	1
MF	pyrimidine-specific mismatch base pair DNA N-glycosylase activity	3
MF	pyrophosphatase activity	345
MF	pyruvate dehydrogenase (acetyl-transferring) activity	2
MF	pyruvate dehydrogenase (acetyl-transferring) kinase activity	5
MF	pyruvate transmembrane transporter activity	2
MF	quinone binding	3
MF	rDNA binding	12
MF	rRNA (cytosine-C5-)-methyltransferase activity	3
MF	rRNA (uridine-2'-O-)-methyltransferase activity	3
MF	rRNA (uridine-N3-)-methyltransferase activity	1
MF	rRNA binding	65
MF	rRNA cytidine N-acetyltransferase activity	1
MF	rRNA methyltransferase activity	4
MF	rRNA primary transcript binding	6
MF	racemase and epimerase activity	2
MF	racemase and epimerase activity, acting on carbohydrates and derivatives	4
MF	recombination hotspot binding	3
MF	regulatory region RNA binding	2
MF	riboflavin kinase activity	2
MF	riboflavin transmembrane transporter activity	3
MF	ribokinase activity	1
MF	ribonuclease activity	80
MF	ribonuclease inhibitor activity	1
MF	ribonucleoprotein complex binding	85
MF	ribonucleoside binding	26
MF	ribonucleoside-diphosphate reductase activity	2
MF	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	6
MF	ribonucleotide binding	101
MF	ribose-5-phosphate isomerase activity	4
MF	ribosomal large subunit binding	5
MF	ribosomal small subunit binding	12
MF	ribosome binding	63
MF	ribulose-phosphate 3-epimerase activity	2
MF	second spliceosomal transesterification activity	1
MF	secondary active transmembrane transporter activity	23
MF	selenite:proton symporter activity	4
MF	sepiapterin reductase activity	2
MF	sequence-specific DNA binding	264
MF	sequence-specific double-stranded DNA binding	112
MF	sequence-specific single stranded DNA binding	4
MF	serine C-palmitoyltransferase activity	2
MF	serine hydrolase activity	18
MF	serine transmembrane transporter activity	3
MF	serine-pyruvate transaminase activity	1
MF	serine-type carboxypeptidase activity	5
MF	serine-type endopeptidase activity	24
MF	serine-type exopeptidase activity	1
MF	serine-type peptidase activity	42
MF	short-chain carboxylesterase activity	1
MF	signal recognition particle binding	8
MF	signal sequence binding	27
MF	signaling receptor activity	16
MF	signaling receptor binding	40
MF	single-strand break-containing DNA binding	2
MF	single-stranded 3'-5' DNA helicase activity	2
MF	single-stranded DNA 3'-5' exodeoxyribonuclease activity	4
MF	single-stranded DNA 5'-3' exodeoxyribonuclease activity	6
MF	single-stranded DNA binding	152
MF	single-stranded DNA endodeoxyribonuclease activity	9
MF	single-stranded DNA exodeoxyribonuclease activity	6
MF	single-stranded DNA helicase activity	6
MF	single-stranded RNA binding	28
MF	single-stranded telomeric DNA binding	6
MF	small GTPase binding	96
MF	small molecule binding	238
MF	small ribosomal subunit rRNA binding	4
MF	snRNA binding	6
MF	snRNP binding	2
MF	snoRNA binding	24
MF	sodium ion transmembrane transporter activity	4
MF	sodium:proton antiporter activity	5
MF	soluble NSF attachment protein activity	1
MF	solute:proton antiporter activity	12
MF	solute:proton symporter activity	12
MF	spermidine synthase activity	3
MF	spermine synthase activity	2
MF	sphingosine N-acyltransferase activity	4
MF	sphingosine hydroxylase activity	2
MF	squalene monooxygenase activity	3
MF	squalene synthase activity	1
MF	steroid binding	42
MF	steroid hormone binding	6
MF	sterol 14-demethylase activity	2
MF	sterol binding	6
MF	sterol esterase activity	5
MF	sterol transporter activity	4
MF	structural constituent of cytoskeleton	40
MF	structural constituent of nuclear pore	25
MF	structural constituent of ribosome	423
MF	structural molecule activity	490
MF	succinate dehydrogenase (ubiquinone) activity	3
MF	succinate dehydrogenase activity	2
MF	sugar transmembrane transporter activity	4
MF	sulfate transmembrane transporter activity	5
MF	sulfuric ester hydrolase activity	2
MF	sulfurtransferase activity	6
MF	superoxide dismutase activity	6
MF	symporter activity	45
MF	syntaxin binding	14
MF	tRNA (adenine-N1-)-methyltransferase activity	1
MF	tRNA (cytosine) methyltransferase activity	2
MF	tRNA (cytosine-5-)-methyltransferase activity	4
MF	tRNA (guanine) methyltransferase activity	1
MF	tRNA (guanine-N2-)-methyltransferase activity	2
MF	tRNA (uracil) methyltransferase activity	3
MF	tRNA binding	77
MF	tRNA dihydrouridine synthase activity	2
MF	tRNA dimethylallyltransferase activity	3
MF	tRNA guanylyltransferase activity	3
MF	tRNA methyltransferase activity	24
MF	tRNA-specific adenosine deaminase activity	4
MF	tRNA-specific adenosine-34 deaminase activity	1
MF	telomerase RNA binding	12
MF	telomerase RNA reverse transcriptase activity	4
MF	telomerase activity	3
MF	telomerase inhibitor activity	6
MF	telomeric DNA binding	20
MF	tetrahydrofolylpolyglutamate synthase activity	6
MF	tetrapyrrole binding	5
MF	thiamine diphosphokinase activity	1
MF	thiol oxidase activity	4
MF	thiol-dependent deubiquitinase	49
MF	thiolester hydrolase activity	12
MF	thioredoxin peroxidase activity	15
MF	thioredoxin-disulfide reductase activity	18
MF	thymidylate kinase activity	2
MF	transaldolase activity	1
MF	transaminase activity	21
MF	transcription cis-regulatory region binding	88
MF	transcription coactivator activity	63
MF	transcription coactivator binding	4
MF	transcription coregulator activity	96
MF	transcription coregulator binding	3
MF	transcription corepressor activity	40
MF	transcription corepressor binding	6
MF	transcription factor binding	102
MF	transcription regulator activity	44
MF	transcription regulatory region nucleic acid binding	21
MF	transferase activity	1393
MF	transferase activity, transferring alkyl or aryl (other than methyl) groups	22
MF	transition metal ion binding	60
MF	transition metal ion transmembrane transporter activity	16
MF	translation activator activity	4
MF	translation elongation factor activity	24
MF	translation factor activity, RNA binding	84
MF	translation initiation factor activity	64
MF	translation initiation factor binding	24
MF	translation regulator activity	15
MF	translation release factor activity	10
MF	translation release factor activity, codon specific	1
MF	translation termination factor activity	2
MF	transmembrane signaling receptor activity	8
MF	transmembrane transporter activity	504
MF	transporter activity	288
MF	tricarboxylic acid transmembrane transporter activity	1
MF	triose-phosphate isomerase activity	4
MF	tripeptide transmembrane transporter activity	2
MF	tryptophan-tRNA ligase activity	8
MF	tubulin binding	88
MF	tubulin-dependent ATPase activity	1
MF	tyrosine-tRNA ligase activity	3
MF	ubiquinone binding	4
MF	ubiquitin activating enzyme activity	4
MF	ubiquitin binding	81
MF	ubiquitin conjugating enzyme activity	20
MF	ubiquitin conjugating enzyme binding	8
MF	ubiquitin ligase inhibitor activity	2
MF	ubiquitin protein ligase activity	144
MF	ubiquitin protein ligase binding	49
MF	ubiquitin-like protein binding	11
MF	ubiquitin-like protein conjugating enzyme binding	4
MF	ubiquitin-like protein ligase binding	28
MF	ubiquitin-like protein transferase activity	48
MF	ubiquitin-like protein-specific protease activity	18
MF	ubiquitin-protein transferase activity	152
MF	ubiquitin-protein transferase inhibitor activity	2
MF	ubiquitin-protein transferase regulator activity	1
MF	unfolded protein binding	297
MF	uracil DNA N-glycosylase activity	4
MF	urea transmembrane transporter activity	2
MF	uridylate kinase activity	2
MF	uridylyltransferase activity	2
MF	uroporphyrinogen-III synthase activity	3
MF	very long-chain fatty acid-CoA ligase activity	5
MF	vitamin B6 binding	4
MF	vitamin binding	8
MF	vitamin transmembrane transporter activity	2
MF	voltage-gated anion channel activity	8
MF	voltage-gated cation channel activity	2
MF	voltage-gated chloride channel activity	12
MF	voltage-gated ion channel activity	12
MF	voltage-gated potassium channel activity	7
MF	xenobiotic transmembrane transporter activity	21
MF	zinc ion binding	136
MF	zinc ion transmembrane transporter activity	12