CRISPRs arrays and Cas genes found in the submitted sequence(s)
File name : /media/bayegy/disk4/tangmaomao/bac_wgs_genome/test/test_assembly_draf/CloudResults/02.Assembly/C2/C2.final.assembly.fasta File size (in bytes): 4936413
Sequence: 1 |
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Sequence description : length=398091 depth=1.00x
Length (bp): 398091
AT%: 49.5512332607369
Number of CRISPRs candidates: 1
CRISPRs |
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Candidate number 1
CRISPR ID : 1_1
- Left flanking sequence: (100 bp [start=137090;end=137189], AT%=47): CCATGAGTGTGTCCTGTTGGGAGTTTAATGCCGGATAAGGCATTTTACGCCGCATCCTGTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAT
- CRISPR start position: 137190 ---------- CRISPR end position: 137307 ---------- CRISPR length: 117
- DR consensus: CCGAGCCGTAGGCCGGATAAGGCGTTCACGC
- DR length: 31 Number of spacers: 1
- Consensus Repeat ID (Nb in CRISPRdb): Unknown (0)
- CRISPRDirection: ND
- Potential orientation (AT%): .
- Conservation of DRs based on Entropy: 96.7741935483871
- Conservation of Spacers: 100
- Evidence Level: 1
137190 | CCGAGCCGTAGGCCGGATAAGGCGTTCACGC | TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA | 137276 |
137277 | CCGAGCCGTAGGCCGGATAAGGCGTTTACGC | 137307 |
- Right flanking sequence: (100 bp [start=137308;end=137407], AT%=42): CGCATCCGGCATCTCAATATCAGATCTTACATGCGCCGCTTTCGCAGCCATCGTCCTGGATTGACGGCACCAGATCGTCCTGCGCGTCTTCAGCACCGTC
Cas system(s) and genes |
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