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\caption{All statistics are based on contigs of size $\geq$ 0 bp, unless otherwise noted (e.g., "\# contigs ($\geq$ 0 bp)" and "Total length ($\geq$ 0 bp)" include all contigs).}
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Assembly & \# contigs ($\geq$ 0 bp) & \# contigs ($\geq$ 1000 bp) & \# contigs ($\geq$ 5000 bp) & \# contigs ($\geq$ 10000 bp) & \# contigs ($\geq$ 25000 bp) & \# contigs ($\geq$ 50000 bp) & Total length ($\geq$ 0 bp) & Total length ($\geq$ 1000 bp) & Total length ($\geq$ 5000 bp) & Total length ($\geq$ 10000 bp) & Total length ($\geq$ 25000 bp) & Total length ($\geq$ 50000 bp) & \# contigs & Largest contig & Total length & GC (\%) & N50 & N75 & L50 & L75 & \# N's per 100 kbp \\ \hline
Sample01\_transcripts & 425643 & 31834 & 1284 & 257 & 15 & 0 & 200787529 & 63740283 & 10700172 & 3816490 & 493995 & 0 & 425643 & 45284 & 200787529 & 63.02 & 532 & 283 & 83712 & 217555 & 0.00 \\ \hline
Sample02\_transcripts & 419152 & 41286 & 2104 & 355 & 20 & 0 & 225023939 & 87860286 & 16758646 & 5080393 & 546573 & 0 & 419152 & 29254 & 225023939 & 61.70 & 676 & 326 & 71627 & 196629 & 0.00 \\ \hline
Sample03\_transcripts & 397038 & 39896 & 2080 & 413 & 14 & 0 & 215315478 & 85405884 & 16870765 & 5769358 & 405158 & 0 & 397038 & 32595 & 215315478 & 61.04 & 693 & 328 & 66882 & 184726 & 0.00 \\ \hline
Sample04\_transcripts & 329326 & 36137 & 1841 & 326 & 8 & 0 & 186460338 & 76548252 & 14605359 & 4453480 & 217580 & 0 & 329326 & 28612 & 186460338 & 61.02 & 737 & 350 & 55673 & 151187 & 0.00 \\ \hline
Sample05\_transcripts & 238614 & 22558 & 1669 & 429 & 52 & 2 & 129740750 & 53746114 & 15563399 & 7155365 & 1781227 & 125117 & 238614 & 74588 & 129740750 & 58.79 & 708 & 316 & 35893 & 108519 & 0.00 \\ \hline
Sample06\_transcripts & 530679 & 47355 & 2372 & 317 & 0 & 0 & 267227321 & 100311178 & 17700254 & 4139173 & 0 & 0 & 530679 & 22266 & 267227321 & 61.48 & 629 & 299 & 90051 & 250350 & 0.00 \\ \hline
Sample07\_transcripts & 107789 & 29123 & 1218 & 237 & 0 & 0 & 96639280 & 62786385 & 9482030 & 3022277 & 0 & 0 & 107789 & 21971 & 96639280 & 48.17 & 1504 & 701 & 17374 & 40675 & 0.00 \\ \hline
Sample08\_transcripts & 93860 & 38190 & 2180 & 349 & 0 & 0 & 115916627 & 89891519 & 16390642 & 4698898 & 0 & 0 & 93860 & 22398 & 115916627 & 45.33 & 2051 & 1091 & 16093 & 35365 & 0.00 \\ \hline
Sample09\_transcripts & 111662 & 40372 & 2275 & 379 & 0 & 0 & 126038336 & 93751607 & 17610765 & 5424720 & 0 & 0 & 111662 & 24131 & 126038336 & 46.52 & 1910 & 977 & 18252 & 41159 & 0.00 \\ \hline
Sample10\_transcripts & 111923 & 30562 & 1521 & 315 & 4 & 0 & 102016060 & 67320021 & 11938524 & 4070828 & 108815 & 0 & 111923 & 31615 & 102016060 & 49.25 & 1542 & 724 & 17454 & 41349 & 0.00 \\ \hline
Sample11\_transcripts & 104218 & 40773 & 2260 & 333 & 4 & 0 & 124554530 & 94915640 & 16967172 & 4496931 & 112389 & 0 & 104218 & 28159 & 124554530 & 46.43 & 1984 & 1041 & 17735 & 39304 & 0.00 \\ \hline
Sample12\_transcripts & 97652 & 40593 & 2487 & 345 & 0 & 0 & 123488776 & 96625915 & 18754412 & 4717148 & 0 & 0 & 97652 & 20785 & 123488776 & 45.43 & 2090 & 1121 & 16722 & 36809 & 0.00 \\ \hline
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